BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022218
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18968.3| unnamed protein product [Vitis vinifera]              119   4e-25
ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding prote...   112   3e-23
ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|22354...    97   2e-18
ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding prote...    95   6e-18
gb|AAG29194.1|AC078898_4 hypothetical protein [Arabidopsis thali...    80   3e-13

>emb|CBI18968.3| unnamed protein product [Vitis vinifera]
          Length = 952

 Score =  119 bits (297), Expect = 4e-25
 Identities = 58/92 (63%), Positives = 70/92 (76%)
 Frame = -2

Query: 530  GRNGSDQSIFSPECSILGQDHVDSRPIFGISKHWLSRNNKVDYLCNPSGQEANPSPYDGF 351
            GR G ++ +FS +CS LGQDH DS   F +SKHWL+R  K D +CNP G +   S YDGF
Sbjct: 861  GRTGCEKHLFSSDCSPLGQDHADSHSSFDLSKHWLNRIEKKDDICNPPG-DVKASTYDGF 919

Query: 350  SETQTESQVVVYEEDLSGRQKMIERVQTRSSL 255
            SETQTESQVV YEEDLSGRQ +I+RV+TRSS+
Sbjct: 920  SETQTESQVVGYEEDLSGRQMIIDRVRTRSSM 951


>ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding protein 1-B-like [Vitis
            vinifera]
          Length = 962

 Score =  112 bits (281), Expect = 3e-23
 Identities = 55/86 (63%), Positives = 66/86 (76%)
 Frame = -2

Query: 512  QSIFSPECSILGQDHVDSRPIFGISKHWLSRNNKVDYLCNPSGQEANPSPYDGFSETQTE 333
            + +FS +CS LGQDH DS   F +SKHWL+R  K D +CNP G +   S YDGFSETQTE
Sbjct: 877  EQLFSSDCSPLGQDHADSHSSFDLSKHWLNRIEKKDDICNPPG-DVKASTYDGFSETQTE 935

Query: 332  SQVVVYEEDLSGRQKMIERVQTRSSL 255
            SQVV YEEDLSGRQ +I+RV+TRSS+
Sbjct: 936  SQVVGYEEDLSGRQMIIDRVRTRSSM 961


>ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|223540530|gb|EEF42097.1|
            topbp1, putative [Ricinus communis]
          Length = 950

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 48/82 (58%), Positives = 60/82 (73%)
 Frame = -2

Query: 497  PECSILGQDHVDSRPIFGISKHWLSRNNKVDYLCNPSGQEANPSPYDGFSETQTESQVVV 318
            P   ILG+DH  S  + G+  HWL+R  K D L NPS +E N   YD F+ETQTESQVV+
Sbjct: 870  PSDPILGEDHGGSHSVIGVPNHWLNRTGKRDDLSNPS-REVNRGVYDNFTETQTESQVVL 928

Query: 317  YEEDLSGRQKMIERVQTRSSLS 252
            YEEDLSGRQ +I+RV+TRSS++
Sbjct: 929  YEEDLSGRQMIIDRVRTRSSMA 950


>ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine max]
          Length = 970

 Score = 95.1 bits (235), Expect = 6e-18
 Identities = 48/91 (52%), Positives = 66/91 (72%)
 Frame = -2

Query: 527  RNGSDQSIFSPECSILGQDHVDSRPIFGISKHWLSRNNKVDYLCNPSGQEANPSPYDGFS 348
            + G ++SI+  + S+L +D+ +   +FG+SKHWL+R+ + D     S Q+     YDGFS
Sbjct: 880  QTGCERSIYPSDRSVLSEDNSNPHTVFGLSKHWLNRSGRKDDNGEAS-QDRRAGIYDGFS 938

Query: 347  ETQTESQVVVYEEDLSGRQKMIERVQTRSSL 255
            ETQTESQVV YEEDLSGRQ +I+RV+TRSSL
Sbjct: 939  ETQTESQVVSYEEDLSGRQMLIDRVRTRSSL 969


>gb|AAG29194.1|AC078898_4 hypothetical protein [Arabidopsis thaliana]
          Length = 783

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 42/85 (49%), Positives = 58/85 (68%)
 Frame = -2

Query: 506 IFSPECSILGQDHVDSRPIFGISKHWLSRNNKVDYLCNPSGQEANPSPYDGFSETQTESQ 327
           I     S+  Q +  +  + G+S+HW++R +K D + +P G +A    Y  FSETQTESQ
Sbjct: 700 ILEKTVSLNEQYNTGNHSVTGLSRHWINRVHKNDDMGSPPG-DATTDTYGNFSETQTESQ 758

Query: 326 VVVYEEDLSGRQKMIERVQTRSSLS 252
           VV YEEDLSGRQ +I+RV+TRSSL+
Sbjct: 759 VVGYEEDLSGRQMLIDRVRTRSSLT 783