BLASTX nr result

ID: Cimicifuga21_contig00022212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022212
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263977.1| PREDICTED: dehydrodolichyl diphosphate synth...   115   5e-24
emb|CAN61413.1| hypothetical protein VITISV_029565 [Vitis vinifera]   114   6e-24
ref|XP_003591942.1| Undecaprenyl pyrophosphate synthetase [Medic...   108   6e-22
ref|XP_003629126.1| Undecaprenyl pyrophosphate synthetase [Medic...   106   2e-21
emb|CBI37101.3| unnamed protein product [Vitis vinifera]              106   2e-21

>ref|XP_002263977.1| PREDICTED: dehydrodolichyl diphosphate synthase 6-like isoform 1
           [Vitis vinifera] gi|359480265|ref|XP_003632424.1|
           PREDICTED: dehydrodolichyl diphosphate synthase 6-like
           isoform 2 [Vitis vinifera]
          Length = 290

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/111 (50%), Positives = 79/111 (71%), Gaps = 3/111 (2%)
 Frame = +3

Query: 3   EKHKQIQEMESDKTSNEITEVDKKGFDKEAA---IRLADIERRMYLAGIPDPDILVRTSG 173
           +K  +I+E+++      +T+++  G++K  A   I L DIE+ +Y+A  PDPDIL+RTSG
Sbjct: 180 KKWDEIRELKASGVDCGLTKLE--GYEKGEAQDLINLTDIEKHLYMAVAPDPDILIRTSG 237

Query: 174 ETRLSNFLLWQTTHSYLHSPVVLWPGITLWTLFWVIINFQQVQPYLDKKKK 326
           ETRLSNFLLWQ+ + YL+SP VLWP I  W L W ++NFQ+   YL+KKKK
Sbjct: 238 ETRLSNFLLWQSQYCYLYSPSVLWPEIGFWHLLWAVLNFQRNHFYLEKKKK 288


>emb|CAN61413.1| hypothetical protein VITISV_029565 [Vitis vinifera]
          Length = 384

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/111 (50%), Positives = 78/111 (70%), Gaps = 3/111 (2%)
 Frame = +3

Query: 3   EKHKQIQEMESDKTSNEITEVDKKGFDKEAA---IRLADIERRMYLAGIPDPDILVRTSG 173
           +K  +I+E+ +      +T+++  G++K  A   I L DIE+ +Y+A  PDPDIL+RTSG
Sbjct: 274 KKWDEIRELNASGVDCGLTKLE--GYEKGEAQDLINLTDIEKHLYMAVAPDPDILIRTSG 331

Query: 174 ETRLSNFLLWQTTHSYLHSPVVLWPGITLWTLFWVIINFQQVQPYLDKKKK 326
           ETRLSNFLLWQ+ + YL+SP VLWP I  W L W ++NFQ+   YL+KKKK
Sbjct: 332 ETRLSNFLLWQSQYCYLYSPSVLWPEIGFWHLLWAVLNFQRNHFYLEKKKK 382


>ref|XP_003591942.1| Undecaprenyl pyrophosphate synthetase [Medicago truncatula]
           gi|355480990|gb|AES62193.1| Undecaprenyl pyrophosphate
           synthetase [Medicago truncatula]
          Length = 426

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/101 (55%), Positives = 71/101 (70%)
 Frame = +3

Query: 24  EMESDKTSNEITEVDKKGFDKEAAIRLADIERRMYLAGIPDPDILVRTSGETRLSNFLLW 203
           E+ S   + EITE  K    + A+I+L DIE+ MY+A  PDPDIL+RTSGE RLSNFLLW
Sbjct: 324 EITSCNGTVEITEERKYKQHQIASIKLVDIEKHMYMAVAPDPDILIRTSGEARLSNFLLW 383

Query: 204 QTTHSYLHSPVVLWPGITLWTLFWVIINFQQVQPYLDKKKK 326
           QT+   L++P VLWP I L  L W ++NFQ+   YL+KKKK
Sbjct: 384 QTSACPLYAPKVLWPEIGLRHLVWAVLNFQRHHFYLEKKKK 424


>ref|XP_003629126.1| Undecaprenyl pyrophosphate synthetase [Medicago truncatula]
           gi|355523148|gb|AET03602.1| Undecaprenyl pyrophosphate
           synthetase [Medicago truncatula]
          Length = 360

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/92 (57%), Positives = 66/92 (71%)
 Frame = +3

Query: 51  EITEVDKKGFDKEAAIRLADIERRMYLAGIPDPDILVRTSGETRLSNFLLWQTTHSYLHS 230
           EITE  K    + A+I+L DIE+ MY+   PDPDIL+RTSGE RLSNFLLWQT+   L++
Sbjct: 267 EITEEQKYKQGEIASIKLVDIEKHMYMTVAPDPDILIRTSGEARLSNFLLWQTSACPLYA 326

Query: 231 PVVLWPGITLWTLFWVIINFQQVQPYLDKKKK 326
           P VLWP I L  L W ++NFQ+   YL+KKKK
Sbjct: 327 PKVLWPEIGLRHLVWAVLNFQRHHFYLEKKKK 358


>emb|CBI37101.3| unnamed protein product [Vitis vinifera]
          Length = 269

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/96 (54%), Positives = 65/96 (67%)
 Frame = +3

Query: 39  KTSNEITEVDKKGFDKEAAIRLADIERRMYLAGIPDPDILVRTSGETRLSNFLLWQTTHS 218
           K  +EI E+   G D         IE+ +Y+A  PDPDIL+RTSGETRLSNFLLWQ+ + 
Sbjct: 180 KKWDEIRELKASGVDY--------IEKHLYMAVAPDPDILIRTSGETRLSNFLLWQSQYC 231

Query: 219 YLHSPVVLWPGITLWTLFWVIINFQQVQPYLDKKKK 326
           YL+SP VLWP I  W L W ++NFQ+   YL+KKKK
Sbjct: 232 YLYSPSVLWPEIGFWHLLWAVLNFQRNHFYLEKKKK 267