BLASTX nr result
ID: Cimicifuga21_contig00022203
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00022203
(1453 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002891749.1| hypothetical protein ARALYDRAFT_337498 [Arab... 89 3e-15
ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cuc... 82 3e-13
ref|XP_002874089.1| hypothetical protein ARALYDRAFT_910273 [Arab... 82 4e-13
ref|NP_175500.1| putative F-box protein [Arabidopsis thaliana] g... 79 2e-12
ref|XP_002893779.1| hypothetical protein ARALYDRAFT_890952 [Arab... 79 2e-12
>ref|XP_002891749.1| hypothetical protein ARALYDRAFT_337498 [Arabidopsis lyrata subsp.
lyrata] gi|297337591|gb|EFH68008.1| hypothetical protein
ARALYDRAFT_337498 [Arabidopsis lyrata subsp. lyrata]
Length = 495
Score = 89.0 bits (219), Expect = 3e-15
Identities = 83/279 (29%), Positives = 130/279 (46%), Gaps = 26/279 (9%)
Frame = -1
Query: 1273 HLLHDSILSEILCRLPVKALCRFKCVSKSLHSII---EENQDFIDKSRPRKPLQLQIENE 1103
+L+ IL +I R+P +++ RF+CVSK SI+ + + F+ KS R L +E +
Sbjct: 26 YLIPFEILIDIFSRVPARSIARFRCVSKLWESILGSPDFTELFLTKSVARPRLLFALEVD 85
Query: 1102 DDLHIFA------VDENGSAHHVHTYEFQASFWDLRCC---EGLLCYHDKFLQL-TLFNP 953
+L +F+ DEN S Y++ + + C GL+ D +L ++NP
Sbjct: 86 KELFVFSSPQPQNPDENSSL-VATPYKYFPKDFPINICPPLNGLVFLQDLKRKLQVVYNP 144
Query: 952 TAEDVIPLP------PWEESFDFGFDPLSSKYKIL--GWKRIDGGPLEFMVLTLEESPS- 800
+ I LP ++ S+ F FDP+S K+K+L W R DG P VLTL+
Sbjct: 145 VTGESITLPEVTATTSFKRSY-FSFDPISKKWKVLYMEWSR-DGTPKSTYVLTLKTGKCL 202
Query: 799 WRPIENTLGIRTLRQSVTSANGRLYWFPKKAYILSFDLAGEEFRVIRFPNMLKQDDLTRY 620
WR I++ + T R NG LY+ S+ + +FR +F + D T
Sbjct: 203 WRKIQDPVFPHTPRCDEICINGVLYYGASAKGYYSYKIVCFDFRFEKFGRIKINGDHTWT 262
Query: 619 LFNFDDSLCLVEQPRGQY----FEIVNLWILKDIDTSQW 515
LFN C + QY +E + LW+L+D QW
Sbjct: 263 LFN-----CKGKLGAHQYNLWGYEKLTLWVLEDAGKHQW 296
>ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cucumis sativus]
gi|449519392|ref|XP_004166719.1| PREDICTED: F-box protein
At3g07870-like [Cucumis sativus]
Length = 375
Score = 82.4 bits (202), Expect = 3e-13
Identities = 97/361 (26%), Positives = 151/361 (41%), Gaps = 35/361 (9%)
Frame = -1
Query: 1273 HLLHDSILSEILCRLPVKALCRFKCVSKSLHSIIEENQDFIDKSRPRKPLQLQIENEDDL 1094
+L HD +L +IL RLP+ +L +F VS+S + + Q F + L +
Sbjct: 3 NLPHD-VLFQILSRLPISSLIQFHSVSRSCRLLAQYTQLFDPNHDHFRCLIFHSDFPIRN 61
Query: 1093 HIFAVDENGSAHHVHTYE-----FQASFWD---LRCCEGLLCYHDKFLQLTLF--NPTAE 944
H++ VD H + + F A+ + + C G LC D LF NP
Sbjct: 62 HLYFVDFPSLTQHKFSVKRIFTPFAATMPEYDVVGSCNGFLCLSDSLYNENLFIYNPFTR 121
Query: 943 DVIPLPPWEES------FDFGFDPLSSKYKIL------GWKRIDGG--PLEFMVLTLEES 806
D + LP ++ + GF P + + KIL G++RI E V TL S
Sbjct: 122 DYLELPKSKDFSNPDVVYGIGFHPQTKRLKILKIVYSKGFRRIQRRFHHSEVQVFTLGTS 181
Query: 805 PSWRPIENTLGIRTLRQSVTSANGRLYW--FPKKAY----ILSFDLAGEEFRVIRFPNML 644
+WR I QS + NGRL+W P++ Y I+SFDLA EEF I P+
Sbjct: 182 -NWRSIGRIFHHLAQGQSPAAINGRLHWVSLPRRHYVGRTIVSFDLASEEFIDIPKPDYG 240
Query: 643 KQDDLTRYLFNFDDSLCLVEQPRGQYFEIVNLWILKDIDTSQ-WVSMMK----NPTALPL 479
L N +D L V EI W+++ + WV P L
Sbjct: 241 SLSRCNFQLMNLNDCLSAVVYCSYGKMEI---WVMEQYGVKESWVKSFNIGSYMPKGLKQ 297
Query: 478 EGTNLHDCYSSEGMERTLKHSNFSSRCGEMLIAAMDDKNQYIFSYSLLNGRFKRTIIRGL 299
EGT + S ++ + + GE+L ++ +N+ + ++ +G+FK G+
Sbjct: 298 EGTEMCFKVSKIVVKGRIVRVVCVLKSGEIL---LEYRNRALVVFNPSSGKFKDVSFEGM 354
Query: 298 P 296
P
Sbjct: 355 P 355
>ref|XP_002874089.1| hypothetical protein ARALYDRAFT_910273 [Arabidopsis lyrata subsp.
lyrata] gi|297319926|gb|EFH50348.1| hypothetical protein
ARALYDRAFT_910273 [Arabidopsis lyrata subsp. lyrata]
Length = 393
Score = 82.0 bits (201), Expect = 4e-13
Identities = 85/307 (27%), Positives = 137/307 (44%), Gaps = 34/307 (11%)
Frame = -1
Query: 1246 EILCRLPVKALCRFKCVSKSLHSIIEENQDFID------KSRPRKPLQLQIENEDDLHIF 1085
EIL RLP K+L RF+ VSK SII ++DF+D K+RPR L + + IF
Sbjct: 29 EILSRLPAKSLIRFQAVSKFWFSII-RSKDFVDSFLTRSKTRPRFLLTFKNFDSRKRFIF 87
Query: 1084 AV------DENGSAHHVHTYEFQAS-FWDLRC--CEGLLCYHDKFLQLTLFNPTAEDVIP 932
+ D++ + H A + +RC G +C + + + NPT ++
Sbjct: 88 SAPEHQKNDKSSTVFARHDMTISADRVYHIRCRPVNGFVCC-TRGDSIAVCNPTTRQIVK 146
Query: 931 LPPWEES-----FDFGFDPLSSKYKIL----------GWKRIDGGPLEFMVLTLEESPSW 797
LP E + G+DP+ +YK+L KR P ++ + W
Sbjct: 147 LPDVESNGRHVYARLGYDPVEDQYKVLCVMFYDPYSAKCKRQGTQPEPYVFTLQSQQKEW 206
Query: 796 RPIENTLGI--RTLRQSVTSANGRLYWFPKKAYILSFDLAGEEFRVIRFP-NMLKQDDLT 626
R IE T G+ R++ + +G +Y+ ++ I+ FD+ E +I+ P N L +
Sbjct: 207 RKIEITQGVAYRSVDGGI-CIDGAIYFGDGRSRIVRFDVRSETLELIQAPENSLITETSD 265
Query: 625 RYLFNFDDSLCLVEQPRGQYFEIVNLWILKDIDTSQWVSMMKNPTALPLEGTN-LHDCYS 449
L N++ L V+ Y LWIL+D + +W + A P E + L D ++
Sbjct: 266 SALLNYNGKLGGVDY---NYTRETILWILEDAEKQEWSELR---FARPSEWDDLLEDYFT 319
Query: 448 SEGMERT 428
SEG T
Sbjct: 320 SEGESHT 326
>ref|NP_175500.1| putative F-box protein [Arabidopsis thaliana]
gi|75268203|sp|Q9C6J3.1|FB52_ARATH RecName: Full=Putative
F-box protein At1g50870
gi|12321805|gb|AAG50947.1|AC079284_22 hypothetical
protein [Arabidopsis thaliana]
gi|332194475|gb|AEE32596.1| putative F-box protein
[Arabidopsis thaliana]
Length = 396
Score = 79.3 bits (194), Expect = 2e-12
Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 30/277 (10%)
Frame = -1
Query: 1255 ILSEILCRLPVKALCRFKCVSKSLHSIIEE---NQDFIDKSRPRKPLQLQIENEDDLHIF 1085
++ EIL RLPVK++ RF+CVSK S + + +S R L + +N+D L +F
Sbjct: 35 LILEILLRLPVKSVLRFRCVSKLWLSTTTDPYFTNSYEARSSTRPSLLMFFKNKDKLFVF 94
Query: 1084 AV-DENGSAHHVHTYEFQASFWDLR----CC-------EGLLCYHDKFLQLTLFNPTAED 941
N ++ H+Y + ++ CC GL+ + + ++NPT
Sbjct: 95 TFPHHNQNSKETHSYSQHVDSYHIKYPKYCCFPFTESVHGLISFRISTKPI-IWNPTMRQ 153
Query: 940 VIPLPPWEESFD-----FGFDPLSSKYKILGWKRIDGGPLEFMVLTL-EESPSWRPIENT 779
+ LP E+S+ G+DP+ K+K++ R D E VLTL WR I++
Sbjct: 154 FLILPKPEKSWKGLSVFLGYDPVEGKHKLMCMNR-DNTSDECRVLTLGSAQEKWRRIKSN 212
Query: 778 LGIRT-LRQSVTSANGRLYW--------FPKKAYILSFDLAGEEFRVIRFPNMLKQDDLT 626
L R+ LR NG +Y+ F I+SF++ E+F I P+
Sbjct: 213 LKHRSILRYYGQCINGVIYYQAYIDQMGFISNPTIMSFEVRSEKFDTITLPS----GSFA 268
Query: 625 RYLFNFDDSLCLVEQPRGQYFEIVNLWILKDIDTSQW 515
L + L V + LW L+D + W
Sbjct: 269 NMLIPYQGRLACVNNTMDDVNGGITLWTLEDAEKHIW 305
>ref|XP_002893779.1| hypothetical protein ARALYDRAFT_890952 [Arabidopsis lyrata subsp.
lyrata] gi|297339621|gb|EFH70038.1| hypothetical protein
ARALYDRAFT_890952 [Arabidopsis lyrata subsp. lyrata]
Length = 404
Score = 79.3 bits (194), Expect = 2e-12
Identities = 93/381 (24%), Positives = 156/381 (40%), Gaps = 38/381 (9%)
Frame = -1
Query: 1327 MEKKNKMHKLNQSLEACFHLLHDSILSEILCRLPVKALCRFKCVSKSLHSIIEENQDFID 1148
M++KN+ N S L + IL RL K+L F+CVSK SII ++ FID
Sbjct: 1 MKRKNEKDTTNPSKLDLLDSLPLDLKMAILTRLSAKSLKNFRCVSKMWSSII-RSRGFID 59
Query: 1147 KSRPRKPLQLQI----------ENEDDLHIF-------AVDENGSAHHVHTYEF-----Q 1034
Q + E E+ L +F + + S+ V +E
Sbjct: 60 SFFSMSAKQSRFIVSLCNIVFGEPEEKLILFFSFSHDEGDESSSSSSLVPNFEMALPAVS 119
Query: 1033 ASFWDLRCC--EGLLCYHDKFLQLTLFNPTAEDVIPLPPWEESFDFGFDPLSSKYKILGW 860
SF+ C G+L + QL + NP+ E V+ L + G+DP+ +YK+L W
Sbjct: 120 FSFYSGSCASLHGILTVETEG-QLMMCNPSTEQVVKLT--SDCIFVGYDPIDDQYKVLSW 176
Query: 859 KRI----DGGPLEFMVLTLEESPSWRPIENTLGIRTLRQSVTSANGRLYW------FPKK 710
I L+ VLTL + WR I+NT NG LY+ +
Sbjct: 177 DNIIWEDPNAHLKHKVLTLGDGQGWRHIKNTTLPYMAISPNVCINGFLYYGAYCLTQTRD 236
Query: 709 AYILSFDLAGEEFRVIRFPNMLKQDDLTRYLFNFDDSLCLVEQPRGQYFEIVNLWILKDI 530
++ FD+ E+ I+ P ++ Q + L + +LWIL+D+
Sbjct: 237 PVMVCFDVRSEKLSFIKAPPVVLQWGKEAVFIEYKGKLASIVGNTYGAVSSFDLWILEDV 296
Query: 529 DTSQWVSMMKNPTALPLEGTNLHDCYSSEGMERTLKHSNFSSRCGEMLIA----AMDDKN 362
+ +W K P+ ++ D + GM ++R GE+++A +++ +
Sbjct: 297 EKHEW---SKQKCVFPI---SVWDFFDLGGMS-----FPGTNRAGEIIMAPSLLSVNLQP 345
Query: 361 QYIFSYSLLNGRFKRTIIRGL 299
YIF Y++ +R + G+
Sbjct: 346 FYIFYYNVETKNIRRVRLLGI 366