BLASTX nr result

ID: Cimicifuga21_contig00022200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022200
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298410.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|XP_002298387.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_002298390.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002865442.1| hypothetical protein ARALYDRAFT_494683 [Arab...    64   1e-08
emb|CAN82122.1| hypothetical protein VITISV_009093 [Vitis vinifera]    64   2e-08

>ref|XP_002298410.1| predicted protein [Populus trichocarpa] gi|222845668|gb|EEE83215.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 43/85 (50%), Positives = 49/85 (57%), Gaps = 18/85 (21%)
 Frame = +3

Query: 96  MTRLLSKTFRSLK---------PHHKQ---------ALKNXXXXXXXXXXXXXXVYLIIS 221
           MTRLLSKTFRS+K         P  +Q         + K               VYLI+S
Sbjct: 1   MTRLLSKTFRSVKLKASSSKPPPPQQQPSPSSSLPRSRKTRAKSSSNSKSRSWSVYLILS 60

Query: 222 TNKPIKTYVGVTTNFSRRLKQHNGD 296
           TN+PIKTYVGVTTNFSRRLKQHNG+
Sbjct: 61  TNRPIKTYVGVTTNFSRRLKQHNGE 85


>ref|XP_002298387.1| predicted protein [Populus trichocarpa] gi|222845645|gb|EEE83192.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 42/86 (48%), Positives = 48/86 (55%), Gaps = 19/86 (22%)
 Frame = +3

Query: 96  MTRLLSKTFRSLK----------PHHKQ---------ALKNXXXXXXXXXXXXXXVYLII 218
           MTRLLS+TFRS+K          P  +Q         + K               VYLI+
Sbjct: 1   MTRLLSQTFRSVKLKASSSKPPPPQQQQPSSSSSLPRSRKTRAKSSSNSKSRSWSVYLIL 60

Query: 219 STNKPIKTYVGVTTNFSRRLKQHNGD 296
           STN PIKTYVGVTTNFSRRLKQHNG+
Sbjct: 61  STNHPIKTYVGVTTNFSRRLKQHNGE 86


>ref|XP_002298390.1| predicted protein [Populus trichocarpa] gi|222845648|gb|EEE83195.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 42/85 (49%), Positives = 47/85 (55%), Gaps = 19/85 (22%)
 Frame = +3

Query: 96  MTRLLSKTFRSLK----------PHHKQ---------ALKNXXXXXXXXXXXXXXVYLII 218
           MTRLLS+TFRS+K          P  +Q         + K               VYLI+
Sbjct: 1   MTRLLSQTFRSVKLKASSSKPPPPQQQQPSSSSSLPRSRKTRAKSSSNSKSRSWSVYLIL 60

Query: 219 STNKPIKTYVGVTTNFSRRLKQHNG 293
           STN PIKTYVGVTTNFSRRLKQHNG
Sbjct: 61  STNHPIKTYVGVTTNFSRRLKQHNG 85


>ref|XP_002865442.1| hypothetical protein ARALYDRAFT_494683 [Arabidopsis lyrata subsp.
           lyrata] gi|297311277|gb|EFH41701.1| hypothetical protein
           ARALYDRAFT_494683 [Arabidopsis lyrata subsp. lyrata]
          Length = 154

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/81 (45%), Positives = 46/81 (56%), Gaps = 14/81 (17%)
 Frame = +3

Query: 96  MTRLLSKTFRSLKPHHKQALKNXXXXXXXXXXXXXX--------------VYLIISTNKP 233
           MTRLLS+TF S+K    + LKN                            VYLI+ST +P
Sbjct: 1   MTRLLSRTFPSVKLRDFKTLKNSQTQVPISSSSSQQSQENSKIPKSKSWSVYLILSTTEP 60

Query: 234 IKTYVGVTTNFSRRLKQHNGD 296
           IKTYVG+TT+F+RRLKQHNG+
Sbjct: 61  IKTYVGITTDFARRLKQHNGE 81


>emb|CAN82122.1| hypothetical protein VITISV_009093 [Vitis vinifera]
          Length = 1697

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/67 (52%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
 Frame = +3

Query: 108  LSKTFRSLKPHHKQA----LKNXXXXXXXXXXXXXXVYLIISTNKPIKTYVGVTTNFSRR 275
            +SK FRS+K  +        K+              VYLI+STN PIKTYVGVTTNFSRR
Sbjct: 1142 ISKIFRSIKXSNPNPNPDPSKSSPSSSRSRSSFSWLVYLILSTNTPIKTYVGVTTNFSRR 1201

Query: 276  LKQHNGD 296
            LKQHNG+
Sbjct: 1202 LKQHNGE 1208


Top