BLASTX nr result

ID: Cimicifuga21_contig00022162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022162
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303885.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_003526326.1| PREDICTED: UPF0481 protein At3g47200-like, p...    59   3e-07
ref|XP_003523695.1| PREDICTED: UPF0481 protein At3g47200-like [G...    59   5e-07
emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]    58   9e-07
ref|XP_003557044.1| PREDICTED: LOW QUALITY PROTEIN: UPF0481 prot...    57   2e-06

>ref|XP_002303885.1| predicted protein [Populus trichocarpa] gi|222841317|gb|EEE78864.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/91 (38%), Positives = 51/91 (56%)
 Frame = -3

Query: 273 LLENQLPFFVLQRLFILATGAKEKFMGASFLELTLKFFNFKYLFNMAEGSARINSTSGIY 94
           LLENQLPFF++Q+LF   +GA    +  +  ELT   F   +   + E S +I + SG+ 
Sbjct: 167 LLENQLPFFIVQKLFERFSGAANPEINCTLTELTCDLFKGLWPDWVKEDSWKIINPSGVL 226

Query: 93  HFLDLLRMCSLPSYARRRVNKKDFKFIPSAT 1
           HF+D L+ C  P+   R   K+ F   P+AT
Sbjct: 227 HFVDFLQKCQQPTEEHRPAKKEVFLSAPTAT 257


>ref|XP_003526326.1| PREDICTED: UPF0481 protein At3g47200-like, partial [Glycine max]
          Length = 261

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/91 (40%), Positives = 49/91 (53%)
 Frame = -3

Query: 273 LLENQLPFFVLQRLFILATGAKEKFMGASFLELTLKFFNFKYLFNMAEGSARINSTSGIY 94
           LLENQ+PFFVL+RLF L+  ++    G SFL+LT  FF               N+ + I 
Sbjct: 2   LLENQVPFFVLERLFNLSFSSRG---GPSFLKLTFSFFK-----EFNRSGLNFNNINRIR 53

Query: 93  HFLDLLRMCSLPSYARRRVNKKDFKFIPSAT 1
           HF DL+R   L      R++ K  K +PSAT
Sbjct: 54  HFTDLIRTFHLQDPLPSRIDGKIIKHLPSAT 84


>ref|XP_003523695.1| PREDICTED: UPF0481 protein At3g47200-like [Glycine max]
          Length = 414

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
 Frame = -3

Query: 273 LLENQLPFFVLQRLFILATGAKEKFMGASFLELTLKFFNFKYLFNMAEGSARINSTSGIY 94
           LLENQLPFFVL+ LF L+  +     G SFLELTL +F+     N    +   N+ + I 
Sbjct: 153 LLENQLPFFVLEGLFNLSFASTSS--GISFLELTLFYFD-----NYNRSNLVFNNNTNIR 205

Query: 93  HFLDLLRMCSLPSYARRRVNKKD--FKFIPSAT 1
           HF DL+R   L     RR ++ D   K  PSAT
Sbjct: 206 HFTDLIRTFHLQHPLNRRPSRTDTYVKHFPSAT 238


>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/91 (40%), Positives = 49/91 (53%)
 Frame = -3

Query: 273 LLENQLPFFVLQRLFILATGAKEKFMGASFLELTLKFFNFKYLFNMAEGSARINSTSGIY 94
           LLENQLPFFVL+ LF L     ++    S LELT  FF F     + E   R +S   + 
Sbjct: 174 LLENQLPFFVLETLFNLIENTDQEGPSTSVLELTYVFFKF---LGLQEVLIR-DSQPDVK 229

Query: 93  HFLDLLRMCSLPSYARRRVNKKDFKFIPSAT 1
           H LDLLR+  +P  + +  +K  F+ I S T
Sbjct: 230 HLLDLLRLWFVPPSSTKSTSKSKFELIRSVT 260


>ref|XP_003557044.1| PREDICTED: LOW QUALITY PROTEIN: UPF0481 protein At3g47200-like,
           partial [Glycine max]
          Length = 344

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 39/92 (42%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
 Frame = -3

Query: 273 LLENQLPFFVLQRLFILATGAK-EKFMGASFLELTLKFFNFKYLFNMAEGSARINSTSGI 97
           LLENQ+PFFVL+RLF L+  ++ + F   SFLE T  FF +   FN    S   N+ + I
Sbjct: 7   LLENQVPFFVLERLFNLSFSSQGDDF--PSFLEFTFHFFGW---FN--RSSLNFNNINRI 59

Query: 96  YHFLDLLRMCSLPSYARRRVNKKDFKFIPSAT 1
            HF DL+R   L      R++ K  K +PS T
Sbjct: 60  RHFTDLIRTFLLQDPLPSRIDGKMIKHLPSVT 91


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