BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022159
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531766.1| transcription factor, putative [Ricinus comm...    99   5e-19
ref|XP_002330570.1| high mobility group family [Populus trichoca...    92   3e-17
ref|XP_003536791.1| PREDICTED: high mobility group B protein 15-...    92   6e-17
ref|XP_003592799.1| High mobility group protein B3 [Medicago tru...    91   1e-16
ref|XP_002300171.1| high mobility group family [Populus trichoca...    91   1e-16

>ref|XP_002531766.1| transcription factor, putative [Ricinus communis]
           gi|223528602|gb|EEF30622.1| transcription factor,
           putative [Ricinus communis]
          Length = 313

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 55/104 (52%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
 Frame = -1

Query: 307 QLPGSSEMIWNGRWVTGEIDGKFDNGYLVTVTFGSEKLKGVLYHAPVE--SQXXXXXXXX 134
           Q PGSS++   G  V G IDGKFDNGYL+TVT GSE+LKGVLYH P E            
Sbjct: 164 QFPGSSQLQL-GSSVNGTIDGKFDNGYLITVTLGSEQLKGVLYHIPNEFYMSQSSHNSDL 222

Query: 133 XXXXXXXXXXXXXRDPSHPKPNRSGYNFFYSEHYARLKSLYRGQ 2
                        RDPS PK +RSGYNFF++EHYA+LK L+ GQ
Sbjct: 223 PPRRHRKRSRLLLRDPSRPKSHRSGYNFFFAEHYAQLKPLHYGQ 266


>ref|XP_002330570.1| high mobility group family [Populus trichocarpa]
           gi|222872128|gb|EEF09259.1| high mobility group family
           [Populus trichocarpa]
          Length = 316

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 50/100 (50%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
 Frame = -1

Query: 295 SSEMIWNGRWVTGEIDGKFDNGYLVTVTFGSEKLKGVLYHAP--VESQXXXXXXXXXXXX 122
           SS+ +  G  V+G IDGKFDNGYLVTV  G+ +LKGVLYH P                  
Sbjct: 170 SSQQLQIGCSVSGIIDGKFDNGYLVTVNLGTNQLKGVLYHIPHTFHESQDSRSSDLPPRR 229

Query: 121 XXXXXXXXXRDPSHPKPNRSGYNFFYSEHYARLKSLYRGQ 2
                    RDPS PK NRSGYNFF++EHYA+LK L+ GQ
Sbjct: 230 RRKRSRLALRDPSQPKSNRSGYNFFFTEHYAQLKPLHHGQ 269


>ref|XP_003536791.1| PREDICTED: high mobility group B protein 15-like [Glycine max]
          Length = 425

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 52/123 (42%), Positives = 68/123 (55%), Gaps = 13/123 (10%)
 Frame = -1

Query: 331 EEKSTDAIQLPGSSEMIWNGRWVTGEIDGKFDNGYLVTVTFGSEKLKGVLYHAP------ 170
           ++ + +A +LP +      G  V G IDGKF++GYLVTVT GSEKLKGVLY AP      
Sbjct: 169 QQSNINAAKLPEAMAASSAGSPVIGVIDGKFESGYLVTVTIGSEKLKGVLYQAPQNPVLV 228

Query: 169 -------VESQXXXXXXXXXXXXXXXXXXXXXRDPSHPKPNRSGYNFFYSEHYARLKSLY 11
                   ++                      RDP+HPKPNRSGYNFF++E +ARLK L+
Sbjct: 229 ASHHSASAKNNNASASLGVHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKLLH 288

Query: 10  RGQ 2
            G+
Sbjct: 289 HGK 291


>ref|XP_003592799.1| High mobility group protein B3 [Medicago truncatula]
           gi|355481847|gb|AES63050.1| High mobility group protein
           B3 [Medicago truncatula]
          Length = 417

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 50/104 (48%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
 Frame = -1

Query: 274 GRWVTGEIDGKFDNGYLVTVTFGSEKLKGVLYHAP-------------VESQXXXXXXXX 134
           G  V G IDGKFD+GYLVTVT GSEKLKGVLY AP               +         
Sbjct: 188 GSQVVGVIDGKFDSGYLVTVTIGSEKLKGVLYQAPQNPVLPASHHSVPANNNNVTASVGV 247

Query: 133 XXXXXXXXXXXXXRDPSHPKPNRSGYNFFYSEHYARLKSLYRGQ 2
                        RDP+HPKPNRSGYNFF++E + RLK L+RG+
Sbjct: 248 HRRRRRKKSEMKKRDPAHPKPNRSGYNFFFAEQHPRLKPLHRGK 291


>ref|XP_002300171.1| high mobility group family [Populus trichocarpa]
           gi|222847429|gb|EEE84976.1| high mobility group family
           [Populus trichocarpa]
          Length = 348

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 54/119 (45%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
 Frame = -1

Query: 331 EEKSTDAIQLPGSSEMIWNGRWVTGEIDGKFDNGYLVTVTFGSEKLKGVLYHAPVESQ-- 158
           ++K+T+  +L  S+        V G IDGKF+ GYLVTVT GSEKLKGVLY AP      
Sbjct: 138 KQKNTNTAELRSSASPP-----VVGVIDGKFEGGYLVTVTVGSEKLKGVLYQAPQNQSWP 192

Query: 157 -------XXXXXXXXXXXXXXXXXXXXXRDPSHPKPNRSGYNFFYSEHYARLKSLYRGQ 2
                                       RDP+HPKPNRSGYNFF+SE +ARLK LY G+
Sbjct: 193 VPQPHGVSANNIPGTRRRRRRKKSEIKRRDPAHPKPNRSGYNFFFSEQHARLKPLYPGK 251