BLASTX nr result

ID: Cimicifuga21_contig00022150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022150
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527366.1| conserved hypothetical protein [Ricinus comm...   162   3e-38
ref|XP_002283727.1| PREDICTED: crt homolog 1 [Vitis vinifera] gi...   162   3e-38
ref|XP_002869717.1| hypothetical protein ARALYDRAFT_492400 [Arab...   157   9e-37
ref|NP_194177.2| CRT (chloroquine-resistance transporter)-like t...   155   3e-36
emb|CAB45081.1| hypothetical protein [Arabidopsis thaliana] gi|7...   155   3e-36

>ref|XP_002527366.1| conserved hypothetical protein [Ricinus communis]
           gi|223533285|gb|EEF35038.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 429

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/105 (74%), Positives = 91/105 (86%)
 Frame = +3

Query: 3   VTSGTEKGQLLSNIDVVWPALMIASSAFQAGASIIKEFVFIDAAKRLKGKPLDIFVVNSF 182
           V+SG+   Q+LS ++ +WPALMI SSAFQAGASIIKEF+F+DAAK LKGK LDIFVVNSF
Sbjct: 232 VSSGSNADQMLSGVEFIWPALMIISSAFQAGASIIKEFIFVDAAKLLKGKSLDIFVVNSF 291

Query: 183 GSGFQALFVLLFMPFLSNLKGIPFAELPSYLRSGAACFFNMGTNV 317
           GSGFQALFV+L +P LSNLKGIPFA+LPSYL+SGA C  N+G NV
Sbjct: 292 GSGFQALFVVLLLPLLSNLKGIPFAQLPSYLKSGAGCLVNIGRNV 336


>ref|XP_002283727.1| PREDICTED: crt homolog 1 [Vitis vinifera]
           gi|302142085|emb|CBI19288.3| unnamed protein product
           [Vitis vinifera]
          Length = 422

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/105 (74%), Positives = 91/105 (86%)
 Frame = +3

Query: 3   VTSGTEKGQLLSNIDVVWPALMIASSAFQAGASIIKEFVFIDAAKRLKGKPLDIFVVNSF 182
           V SG+   Q+LS I+ +WPALMIASSAFQAGASIIKEFVF+DAA RLKGK LDIFVVNSF
Sbjct: 226 VASGSNGDQMLSGIEFIWPALMIASSAFQAGASIIKEFVFVDAATRLKGKLLDIFVVNSF 285

Query: 183 GSGFQALFVLLFMPFLSNLKGIPFAELPSYLRSGAACFFNMGTNV 317
           GSGFQALFVLL +P LSN +GIPF +LPSYL++GA CF N+G+N+
Sbjct: 286 GSGFQALFVLLLLPLLSNFRGIPFPQLPSYLKAGAGCFLNIGSNI 330


>ref|XP_002869717.1| hypothetical protein ARALYDRAFT_492400 [Arabidopsis lyrata subsp.
           lyrata] gi|297315553|gb|EFH45976.1| hypothetical protein
           ARALYDRAFT_492400 [Arabidopsis lyrata subsp. lyrata]
          Length = 426

 Score =  157 bits (397), Expect = 9e-37
 Identities = 76/105 (72%), Positives = 87/105 (82%)
 Frame = +3

Query: 3   VTSGTEKGQLLSNIDVVWPALMIASSAFQAGASIIKEFVFIDAAKRLKGKPLDIFVVNSF 182
           V SG+     LS I  +WPA+++AS+AFQAGASIIKEFVF DAAKRL+GKPLD+FVVNSF
Sbjct: 226 VASGSGADTTLSGIGFLWPAVLVASAAFQAGASIIKEFVFNDAAKRLEGKPLDLFVVNSF 285

Query: 183 GSGFQALFVLLFMPFLSNLKGIPFAELPSYLRSGAACFFNMGTNV 317
           GSGFQALFV L +PFLSNLKGIPFA LPSYL+ GA CFFN G  +
Sbjct: 286 GSGFQALFVFLLLPFLSNLKGIPFASLPSYLKDGAGCFFNTGAKI 330


>ref|NP_194177.2| CRT (chloroquine-resistance transporter)-like transporter 2
           [Arabidopsis thaliana] gi|334186873|ref|NP_001190820.1|
           CRT (chloroquine-resistance transporter)-like
           transporter 2 [Arabidopsis thaliana]
           gi|119935896|gb|ABM06027.1| At4g24460 [Arabidopsis
           thaliana] gi|332659507|gb|AEE84907.1| CRT
           (chloroquine-resistance transporter)-like transporter 2
           [Arabidopsis thaliana] gi|332659508|gb|AEE84908.1| CRT
           (chloroquine-resistance transporter)-like transporter 2
           [Arabidopsis thaliana]
          Length = 431

 Score =  155 bits (392), Expect = 3e-36
 Identities = 76/105 (72%), Positives = 87/105 (82%)
 Frame = +3

Query: 3   VTSGTEKGQLLSNIDVVWPALMIASSAFQAGASIIKEFVFIDAAKRLKGKPLDIFVVNSF 182
           V+SG+     LS I  +WPA+++AS+AFQAGASIIKEFVF DAAKRL+GK LDIFVVNSF
Sbjct: 231 VSSGSGADTTLSGIGFLWPAVLVASAAFQAGASIIKEFVFNDAAKRLEGKSLDIFVVNSF 290

Query: 183 GSGFQALFVLLFMPFLSNLKGIPFAELPSYLRSGAACFFNMGTNV 317
           GSGFQALFV L +PFLSNLKGIPFA LPSYL+ GA CFFN G  +
Sbjct: 291 GSGFQALFVFLLLPFLSNLKGIPFASLPSYLKDGAGCFFNTGAKI 335


>emb|CAB45081.1| hypothetical protein [Arabidopsis thaliana]
           gi|7269296|emb|CAB79356.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 380

 Score =  155 bits (392), Expect = 3e-36
 Identities = 76/105 (72%), Positives = 87/105 (82%)
 Frame = +3

Query: 3   VTSGTEKGQLLSNIDVVWPALMIASSAFQAGASIIKEFVFIDAAKRLKGKPLDIFVVNSF 182
           V+SG+     LS I  +WPA+++AS+AFQAGASIIKEFVF DAAKRL+GK LDIFVVNSF
Sbjct: 204 VSSGSGADTTLSGIGFLWPAVLVASAAFQAGASIIKEFVFNDAAKRLEGKSLDIFVVNSF 263

Query: 183 GSGFQALFVLLFMPFLSNLKGIPFAELPSYLRSGAACFFNMGTNV 317
           GSGFQALFV L +PFLSNLKGIPFA LPSYL+ GA CFFN G  +
Sbjct: 264 GSGFQALFVFLLLPFLSNLKGIPFASLPSYLKDGAGCFFNTGAKI 308


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