BLASTX nr result

ID: Cimicifuga21_contig00022119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022119
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    97   4e-18
emb|CAN68530.1| hypothetical protein VITISV_011919 [Vitis vinife...    91   3e-16
emb|CBI35938.3| unnamed protein product [Vitis vinifera]               89   1e-15
ref|XP_002275641.1| PREDICTED: putative F-box protein At3g44060 ...    89   1e-15
emb|CAN71448.1| hypothetical protein VITISV_027852 [Vitis vinifera]    89   1e-15

>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 63/171 (36%), Positives = 100/171 (58%), Gaps = 4/171 (2%)
 Frame = +2

Query: 119 ISNLPEPIQNRIVSFLPLEDAIRTSTLSKAWMNLSSTRTIFDFHQPNFERMSRGKRDFKD 298
           I++LP+ +   I+SFL  +DA+RTS LS+ W +L  + +  +FHQ  F+     ++ F +
Sbjct: 40  INDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEFHQCYFKAK---RKIFMN 96

Query: 299 FVYQTLVLHDAFDIEKLTLSLDLDELSVSHADSWLSCAVSRNVKEIDLRVLYGHIEK--- 469
            V + L+L D+ +IEK TLS  +D+   +   +W+S AV+RNVKE+ +    G   +   
Sbjct: 97  SVERVLLLRDSSNIEKFTLSCGIDD--ATRTRTWVSAAVNRNVKELCVNFYEGGESESFV 154

Query: 470 LPSCLFTSKTLRVLALDNVD-LKLPTNIGFPKLETLKLRSVEFFDENLTNQ 619
            P CLFT  TL  L + +   L+L ++I  P L+ L L+ V F DE+ T Q
Sbjct: 155 SPLCLFTCATLTKLKITSHGVLRLSSSISLPCLKILSLQHVVFPDEDSTQQ 205


>emb|CAN68530.1| hypothetical protein VITISV_011919 [Vitis vinifera]
           gi|297743067|emb|CBI35934.3| unnamed protein product
           [Vitis vinifera]
          Length = 521

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 63/172 (36%), Positives = 96/172 (55%), Gaps = 10/172 (5%)
 Frame = +2

Query: 104 QNMDRISNLPEPIQNRIVSFLPLEDAIRTSTLSKAWMNLS--STRTIFDFHQPNFERMSR 277
           +  DRIS+LP+ I  RI+  LP +D  R+S LS+AW  LS  S+ ++  F  P+F    R
Sbjct: 3   EEQDRISHLPDDILIRILGLLPTKDVARSSLLSQAWRKLSPFSSLSLLMFQCPDFLESCR 62

Query: 278 GKRDFKDFVY---QTLVLHDA-FDIEKLTLSLDLDEL-SVSHADSWLSCAVSRNVKEIDL 442
              D   F+     +L L     ++ +L L LDLD++ S S  DSW+  A+ R VKE+DL
Sbjct: 63  KNTDVSSFINAIDSSLRLRPKDVNLARLRLHLDLDDIESESLIDSWIDAALERKVKELDL 122

Query: 443 RVLYGHIEK---LPSCLFTSKTLRVLALDNVDLKLPTNIGFPKLETLKLRSV 589
            +    I K   LP+ +F++ T+ VL+L+   L++  +I  P L  L LR +
Sbjct: 123 YLRPRSIAKPYGLPAKIFSTTTITVLSLEQCRLEICGDIDLPALRKLCLRQI 174


>emb|CBI35938.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 10/172 (5%)
 Frame = +2

Query: 104 QNMDRISNLPEPIQNRIVSFLPLEDAIRTSTLSKAWMNLS--STRTIFDFHQPNFERMSR 277
           +  DRIS LP+ I  RI+S LP ++  RTS LSKAW  LS  S+ ++  F  P+F    R
Sbjct: 35  EEQDRISYLPDDILIRILSLLPTKEIARTSLLSKAWRKLSPFSSLSVLMFQSPDFFHSRR 94

Query: 278 GKRDFKDFVY---QTLVLHDA-FDIEKLTLSLDLDEL-SVSHADSWLSCAVSRNVKEIDL 442
              D   F+     +L L      + +L L L L+++ S S  DSW+  A+ R VKE+DL
Sbjct: 95  KNFDVSSFINAIDSSLRLRQKDVSLARLQLRLHLNDIESESLIDSWIDAALERKVKELDL 154

Query: 443 RVLYGHIEK---LPSCLFTSKTLRVLALDNVDLKLPTNIGFPKLETLKLRSV 589
            +L   I +   LP+ +F++ T+ VL+L+   L++  ++  P L  L LR +
Sbjct: 155 YLLPRSIPEPYGLPAKIFSTTTITVLSLEQCRLEICGDVDLPALRKLCLRKI 206


>ref|XP_002275641.1| PREDICTED: putative F-box protein At3g44060 [Vitis vinifera]
          Length = 520

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 10/172 (5%)
 Frame = +2

Query: 104 QNMDRISNLPEPIQNRIVSFLPLEDAIRTSTLSKAWMNLS--STRTIFDFHQPNFERMSR 277
           +  DRIS LP+ I  RI+S LP ++  RTS LSKAW  LS  S+ ++  F  P+F    R
Sbjct: 3   EEQDRISYLPDDILIRILSLLPTKEIARTSLLSKAWRKLSPFSSLSVLMFQSPDFFHSRR 62

Query: 278 GKRDFKDFVY---QTLVLHDA-FDIEKLTLSLDLDEL-SVSHADSWLSCAVSRNVKEIDL 442
              D   F+     +L L      + +L L L L+++ S S  DSW+  A+ R VKE+DL
Sbjct: 63  KNFDVSSFINAIDSSLRLRQKDVSLARLQLRLHLNDIESESLIDSWIDAALERKVKELDL 122

Query: 443 RVLYGHIEK---LPSCLFTSKTLRVLALDNVDLKLPTNIGFPKLETLKLRSV 589
            +L   I +   LP+ +F++ T+ VL+L+   L++  ++  P L  L LR +
Sbjct: 123 YLLPRSIPEPYGLPAKIFSTTTITVLSLEQCRLEICGDVDLPALRKLCLRKI 174


>emb|CAN71448.1| hypothetical protein VITISV_027852 [Vitis vinifera]
          Length = 310

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 10/172 (5%)
 Frame = +2

Query: 104 QNMDRISNLPEPIQNRIVSFLPLEDAIRTSTLSKAWMNLS--STRTIFDFHQPNFERMSR 277
           +  DRIS LP+ I  RI+S LP ++  RTS LSKAW  LS  S+ ++  F  P+F    R
Sbjct: 3   EEQDRISYLPDDILIRILSLLPTKEIARTSLLSKAWRKLSPFSSLSVLMFQSPDFFHSRR 62

Query: 278 GKRDFKDFVY---QTLVLHDA-FDIEKLTLSLDLDEL-SVSHADSWLSCAVSRNVKEIDL 442
              D   F+     +L L      + +L L L L+++ S S  DSW+  A+ R VKE+DL
Sbjct: 63  KNFDVSSFINAIDSSLRLRQKDVSLARLQLRLHLNDIESESLIDSWIDAALERKVKELDL 122

Query: 443 RVLYGHIEK---LPSCLFTSKTLRVLALDNVDLKLPTNIGFPKLETLKLRSV 589
            +L   I +   LP+ +F++ T+ VL+L+   L++  ++  P L  L LR +
Sbjct: 123 YLLPRSIPEPYGLPAKIFSTTTITVLSLEQCRLEICGDVDLPALRKLCLRKI 174


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