BLASTX nr result

ID: Cimicifuga21_contig00022114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022114
         (1223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vit...   281   2e-73
ref|XP_002315453.1| predicted protein [Populus trichocarpa] gi|2...   261   2e-67
emb|CBI40211.3| unnamed protein product [Vitis vinifera]              257   5e-66
ref|XP_003535500.1| PREDICTED: RING-H2 finger protein ATL32-like...   254   2e-65
ref|XP_003556277.1| PREDICTED: RING-H2 finger protein ATL1-like ...   251   2e-64

>ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vitis vinifera]
          Length = 228

 Score =  281 bits (719), Expect = 2e-73
 Identities = 140/232 (60%), Positives = 168/232 (72%)
 Frame = -2

Query: 901 VLGSSINVVMTIIGFAVSTMFIVFVCTRLICARIQLNASRRSFPTASRSDXXXXXXXXXX 722
           ++   +N+VMT+IGFAVSTMFIVFVCTRL+CARIQLNASRRSFP ASRSD          
Sbjct: 1   MISGGVNLVMTVIGFAVSTMFIVFVCTRLVCARIQLNASRRSFPVASRSDLSILERGLHG 60

Query: 721 XEPVVVAKFPTKKFSDEFFSSGDEAQCTVCLAEYQQKDILRILPYCGHSFHVACIDIWLQ 542
            EP VVA FPTKKF+DEFFS  ++AQCTVCL EYQ +DILRILPYCGH FHV CIDIWLQ
Sbjct: 61  LEPAVVANFPTKKFADEFFSPAEDAQCTVCLVEYQAEDILRILPYCGHFFHVTCIDIWLQ 120

Query: 541 QNSTCPICRISLRDYPDKKHVMQPXXXXXXXXXXXXSPRDTHSYNFLYTSQGYSSRSIDS 362
           Q+STCP+CRISL ++P++K +MQP              R+THSYN L T +G+SSRS D+
Sbjct: 121 QHSTCPVCRISLWEFPERKCLMQPMFSSAVRSHFGMESRNTHSYNCLSTGRGFSSRSHDN 180

Query: 361 RRMEPIQEDQFASDLNAAEAGETVSSFADGDRVVKDIGLGESQNKLVESPSN 206
            RM+PIQEDQF    + AEA E+     D ++  KD     S+NK +ESPSN
Sbjct: 181 HRMDPIQEDQFGPGGDGAEAQESTLPLTDANQPAKD-----SENKHIESPSN 227


>ref|XP_002315453.1| predicted protein [Populus trichocarpa] gi|222864493|gb|EEF01624.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  261 bits (668), Expect = 2e-67
 Identities = 135/232 (58%), Positives = 164/232 (70%)
 Frame = -2

Query: 901 VLGSSINVVMTIIGFAVSTMFIVFVCTRLICARIQLNASRRSFPTASRSDXXXXXXXXXX 722
           ++ S IN+VMT+IGF+VSTMFIVFVCTRLICARIQLNASRRSF  ASRSD          
Sbjct: 1   MMASGINLVMTVIGFSVSTMFIVFVCTRLICARIQLNASRRSFRIASRSDLSMLERGLHG 60

Query: 721 XEPVVVAKFPTKKFSDEFFSSGDEAQCTVCLAEYQQKDILRILPYCGHSFHVACIDIWLQ 542
            EPVV+A FPTKK++D+ FS+ ++AQCTVCLAEY  KDILRILPYCGHSFHV CID+WLQ
Sbjct: 61  LEPVVIASFPTKKYNDKLFSASEDAQCTVCLAEYHGKDILRILPYCGHSFHVTCIDMWLQ 120

Query: 541 QNSTCPICRISLRDYPDKKHVMQPXXXXXXXXXXXXSPRDTHSYNFLYTSQGYSSRSIDS 362
           Q+STCP+CRISLR++P+KK  MQP               D+HSYN+L T  G S RS DS
Sbjct: 121 QHSTCPMCRISLREFPEKKCAMQPLFSSAIRSQYGTETFDSHSYNYLLTGHGISQRSDDS 180

Query: 361 RRMEPIQEDQFASDLNAAEAGETVSSFADGDRVVKDIGLGESQNKLVESPSN 206
             M+ IQ++  ASD + A  GE      + +++ KD G     +K VESPSN
Sbjct: 181 HGMDTIQDNLCASDGDEA-CGENSPPLTESNQIAKDTG-----DKHVESPSN 226


>emb|CBI40211.3| unnamed protein product [Vitis vinifera]
          Length = 209

 Score =  257 bits (656), Expect = 5e-66
 Identities = 129/213 (60%), Positives = 152/213 (71%)
 Frame = -2

Query: 844 MFIVFVCTRLICARIQLNASRRSFPTASRSDXXXXXXXXXXXEPVVVAKFPTKKFSDEFF 665
           MFIVFVCTRL+CARIQLNASRRSFP ASRSD           EP VVA FPTKKF+DEFF
Sbjct: 1   MFIVFVCTRLVCARIQLNASRRSFPVASRSDLSILERGLHGLEPAVVANFPTKKFADEFF 60

Query: 664 SSGDEAQCTVCLAEYQQKDILRILPYCGHSFHVACIDIWLQQNSTCPICRISLRDYPDKK 485
           S  ++AQCTVCL EYQ +DILRILPYCGH FHV CIDIWLQQ+STCP+CRISL ++P++K
Sbjct: 61  SPAEDAQCTVCLVEYQAEDILRILPYCGHFFHVTCIDIWLQQHSTCPVCRISLWEFPERK 120

Query: 484 HVMQPXXXXXXXXXXXXSPRDTHSYNFLYTSQGYSSRSIDSRRMEPIQEDQFASDLNAAE 305
            +MQP              R+THSYN L T +G+SSRS D+ RM+PIQEDQF    + AE
Sbjct: 121 CLMQPMFSSAVRSHFGMESRNTHSYNCLSTGRGFSSRSHDNHRMDPIQEDQFGPGGDGAE 180

Query: 304 AGETVSSFADGDRVVKDIGLGESQNKLVESPSN 206
           A E+     D ++  KD     S+NK +ESPSN
Sbjct: 181 AQESTLPLTDANQPAKD-----SENKHIESPSN 208


>ref|XP_003535500.1| PREDICTED: RING-H2 finger protein ATL32-like [Glycine max]
          Length = 229

 Score =  254 bits (650), Expect = 2e-65
 Identities = 128/232 (55%), Positives = 163/232 (70%)
 Frame = -2

Query: 901 VLGSSINVVMTIIGFAVSTMFIVFVCTRLICARIQLNASRRSFPTASRSDXXXXXXXXXX 722
           ++ S IN+VMT+IGFAVSTMFIVFVCTRLICARI LNA+RRSFP ASRS+          
Sbjct: 1   MISSGINLVMTVIGFAVSTMFIVFVCTRLICARIHLNAARRSFPIASRSNLSMMERGCHG 60

Query: 721 XEPVVVAKFPTKKFSDEFFSSGDEAQCTVCLAEYQQKDILRILPYCGHSFHVACIDIWLQ 542
            E V VAKFPTKK+SD+FF++ + +QCTVCL+EYQ +D+LRILPYCGHSFHV CID+WLQ
Sbjct: 61  LERVTVAKFPTKKYSDKFFAAAENSQCTVCLSEYQGEDMLRILPYCGHSFHVTCIDLWLQ 120

Query: 541 QNSTCPICRISLRDYPDKKHVMQPXXXXXXXXXXXXSPRDTHSYNFLYTSQGYSSRSIDS 362
           QNSTCP+CRISLR++PD+K +MQP               D   Y+ +    G SSR+ D+
Sbjct: 121 QNSTCPVCRISLREFPDRKRLMQPLFSSALQPHYDIESFDNRHYHCMIADNGLSSRTPDN 180

Query: 361 RRMEPIQEDQFASDLNAAEAGETVSSFADGDRVVKDIGLGESQNKLVESPSN 206
             + PI+ED F S+ + A A + ++  ++GD  +KD G      K VESPSN
Sbjct: 181 HAVNPIEEDHFPSEGDGAVAMDNITCLSEGD-FIKDEG-----KKHVESPSN 226


>ref|XP_003556277.1| PREDICTED: RING-H2 finger protein ATL1-like [Glycine max]
          Length = 229

 Score =  251 bits (642), Expect = 2e-64
 Identities = 125/232 (53%), Positives = 161/232 (69%)
 Frame = -2

Query: 901 VLGSSINVVMTIIGFAVSTMFIVFVCTRLICARIQLNASRRSFPTASRSDXXXXXXXXXX 722
           ++ S IN+VMT+IGFAVSTMFIVFVCTRLICARI +N +RRSFP ASRS+          
Sbjct: 1   MISSGINLVMTVIGFAVSTMFIVFVCTRLICARIHMNTARRSFPIASRSNLSMMERGCHG 60

Query: 721 XEPVVVAKFPTKKFSDEFFSSGDEAQCTVCLAEYQQKDILRILPYCGHSFHVACIDIWLQ 542
            E V VAKFPTKK+SD+FF++ + +QCTVCL+EYQ +D+LRILPYCGHSFHV CID+WLQ
Sbjct: 61  LERVTVAKFPTKKYSDKFFAAAENSQCTVCLSEYQGEDMLRILPYCGHSFHVTCIDLWLQ 120

Query: 541 QNSTCPICRISLRDYPDKKHVMQPXXXXXXXXXXXXSPRDTHSYNFLYTSQGYSSRSIDS 362
           QNSTCP+CRISLR++P++K +MQP               DTH Y+ +    G SSR+ D+
Sbjct: 121 QNSTCPVCRISLREFPERKLLMQPLFSSALQPHYGIESFDTHHYHCMMADNGLSSRTPDN 180

Query: 361 RRMEPIQEDQFASDLNAAEAGETVSSFADGDRVVKDIGLGESQNKLVESPSN 206
             + PI+ED F S+   A A + ++  ++GD +       E   K VESPSN
Sbjct: 181 LGVNPIEEDHFPSEGGGAVAMDNITCLSEGDFI------KEEGKKHVESPSN 226


Top