BLASTX nr result
ID: Cimicifuga21_contig00022085
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00022085
(1680 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g... 384 e-104
ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g... 338 2e-90
ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g... 337 6e-90
ref|XP_002527667.1| ring finger protein, putative [Ricinus commu... 335 2e-89
gb|ACU17851.1| unknown [Glycine max] 333 8e-89
>ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Vitis
vinifera]
Length = 375
Score = 384 bits (985), Expect = e-104
Identities = 209/369 (56%), Positives = 249/369 (67%), Gaps = 19/369 (5%)
Frame = +3
Query: 540 MGSLGNPQSWVPYENIKDCNQGFCSLYCPQWCYIIFXXXXXLAFADDDSKTNFSPLVIAI 719
MGSLG+P+ WVPY + KDC+QGFCSLYCPQWCYI F D++S NFSPLVIAI
Sbjct: 1 MGSLGSPKIWVPYISTKDCSQGFCSLYCPQWCYIPAPPPPYFEFPDENSGPNFSPLVIAI 60
Query: 720 IGILASAFLLVSYYTVISKYCGNMDSARRSANQDPSEESTENQNQSNSELWHVSTGGLDE 899
IGILASAFLLVSYYT+ISKYCGNM+ RR NQD +EE +N N + E WHV+T GLDE
Sbjct: 61 IGILASAFLLVSYYTIISKYCGNMERERRE-NQDINEELEDNHNPALHEPWHVATTGLDE 119
Query: 900 ALIKLITVCKYRKGEGLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLFCIDTWLKSHPN 1079
ALIK IT+CKY+KG+GLVEGTDCSVCLSEF+E ESLRLLPKCSHAFH+ CIDTWLKSH N
Sbjct: 120 ALIKSITLCKYKKGDGLVEGTDCSVCLSEFEEEESLRLLPKCSHAFHVQCIDTWLKSHSN 179
Query: 1080 CPLCRANVIITGPPPLQLPSTVQESPSDNE----SEQDNHTVVMVEDLERRNEESSHPDD 1247
CPLCRAN++ T P QLP V ESP +NE S+ ++ V + EDLER EE +
Sbjct: 180 CPLCRANIVPTTVSPTQLPPPVMESPLNNEPSQQSQLEHENVAVGEDLERVAEEEEIMRN 239
Query: 1248 DVIPK--------IGGS---DIIIEIKDEGAGTTRRSVSMD---SGRVSIAEILSTSEDD 1385
+VIPK +G S D IIEI+DEG RRS+S+D R+S+A+IL +ED+
Sbjct: 240 EVIPKTPSRVFSDLGNSEERDTIIEIRDEGEQQIRRSISLDYSCQTRLSVADILLMNEDE 299
Query: 1386 ESDIEMREYQV-GVEXXXXXXXXXXXXXXXXXXVLHCVASPTAMKRSLSSGRFLFTRQGR 1562
+ + + Q G VLHCV SP +MKRS SSGR LFTR R
Sbjct: 300 DPQMGDCDCQFPGHVGSSKVAVGEISKYSHRNRVLHCVMSPVSMKRSFSSGRLLFTRHAR 359
Query: 1563 ARM*LIIRF 1589
R +I F
Sbjct: 360 GRDGIIPTF 368
>ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis
sativus] gi|449532198|ref|XP_004173069.1| PREDICTED: E3
ubiquitin-protein ligase Os04g0590900-like [Cucumis
sativus]
Length = 373
Score = 338 bits (868), Expect = 2e-90
Identities = 183/361 (50%), Positives = 231/361 (63%), Gaps = 21/361 (5%)
Frame = +3
Query: 543 GSLGNPQSWVPYENIKDCNQGFCSLYCPQWCYIIFXXXXXLAFADDDSKTNFSPLVIAII 722
GS GNP++W+PY + KDC+QGFCS+YCPQWCYI+F L F D+ S +FSPLVIAII
Sbjct: 4 GSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDN-SGPHFSPLVIAII 62
Query: 723 GILASAFLLVSYYTVISKYCGNMDSARRSANQDPSEESTENQNQSNSELWHVSTGGLDEA 902
GILASAFLLV+YYT+ISKYCGN + + N DPSEE +N N + E WHV+T GLDEA
Sbjct: 63 GILASAFLLVTYYTIISKYCGNTNRLSGTGNHDPSEEYEDNHNPTFHEPWHVATTGLDEA 122
Query: 903 LIKLITVCKYRKGEGLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLFCIDTWLKSHPNC 1082
LIK ITVCKY++ +GLVEG+DCSVCLSEFQE+ESLRLLPKCSHAFHL CIDTWLKSH NC
Sbjct: 123 LIKSITVCKYKREDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNC 182
Query: 1083 PLCRANVI-ITGPPPLQLPSTVQESPSDNE-----SEQDNHTVVMVEDLERRNEESSHPD 1244
PLCRAN+I I P+QLP++ P NE S+ +++ V ++ + + E
Sbjct: 183 PLCRANIISINAGSPVQLPAST-AYPITNETVPETSQDNDYEAVSLDSGQSFSNEDGKNS 241
Query: 1245 DDVIPKIGG---SDIIIEIKDEGAGTTRRSVSMD---SGRVSIAEILSTSEDD------- 1385
+G D IIE++D RRS+SMD + IA++L +EDD
Sbjct: 242 VRAFSDLGNLEKRDTIIELRDGRLQQIRRSISMDHCSQNHIIIADVLRLNEDDFGGIDEA 301
Query: 1386 --ESDIEMREYQVGVEXXXXXXXXXXXXXXXXXXVLHCVASPTAMKRSLSSGRFLFTRQG 1559
D+ ++ VG + +LHCV SP +MKRS SSGR T+ G
Sbjct: 302 GSSGDVGSSKHSVGED----------SRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHG 351
Query: 1560 R 1562
R
Sbjct: 352 R 352
>ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
max]
Length = 364
Score = 337 bits (864), Expect = 6e-90
Identities = 185/366 (50%), Positives = 225/366 (61%), Gaps = 23/366 (6%)
Frame = +3
Query: 540 MGSLGNPQSWVPYENIKDCNQGFCSLYCPQWCYIIFXXXXXLAFADDDSKTNFSPLVIAI 719
M SLGNP+SWVPY N KDC+QGFCSLYCPQWCY+I+ F DDDS NFSPLVIA+
Sbjct: 1 MASLGNPKSWVPYMNNKDCSQGFCSLYCPQWCYVIYPPPPPFEFPDDDSSPNFSPLVIAV 60
Query: 720 IGILASAFLLVSYYTVISKYCGNMDSARRSANQDPSEESTENQNQSNSELWHVSTGGLDE 899
IG+L SAFLLVSYYT+ISKYCG+ +S++ S N + + E E+ N S E WH T GLDE
Sbjct: 61 IGVLVSAFLLVSYYTIISKYCGSRESSQ-SENHEENVELEEDHNPSLHEPWHAPTIGLDE 119
Query: 900 ALIKLITVCKYRKGEGLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLFCIDTWLKSHPN 1079
ALIK ITVCKY+KG+GLVE TDCSVCLSEFQ++ES+RLLPKCSHAFHL CIDTWLKSH +
Sbjct: 120 ALIKSITVCKYKKGDGLVEVTDCSVCLSEFQDDESVRLLPKCSHAFHLPCIDTWLKSHSS 179
Query: 1080 CPLCRANVIITGPPPLQLPSTVQESPSDNESEQDNHTVVMVEDLERRNEESSHPDDDVIP 1259
CPLCRA++ L + S V E PS N++ N R+ E + +V
Sbjct: 180 CPLCRASIFTFNAAALHVASPVTEPPSRNDTSSGNQRADENIVAVARDSELDAVEGEVTL 239
Query: 1260 KIGG----------SDI--------IIEIKDEGAGTTRRSVSMD-----SGRVSIAEILS 1370
GG SD+ +IEI+DEG + RR+VSMD +SIA++L
Sbjct: 240 THGGAVSKSALRALSDLGNLRGRHSVIEIRDEGYDSIRRTVSMDHSFQRGSGLSIADVLH 299
Query: 1371 TSEDDESDIEMREYQVGVEXXXXXXXXXXXXXXXXXXVLHCVASPTAMKRSLSSGRFLFT 1550
+++ E VLHCV SP AMKRS SSGRF +
Sbjct: 300 VNQEHEG-------CSNGAGPSKNSRGESSKSSYRRKVLHCVLSPIAMKRSFSSGRFSLS 352
Query: 1551 RQGRAR 1568
R GR R
Sbjct: 353 RNGRGR 358
>ref|XP_002527667.1| ring finger protein, putative [Ricinus communis]
gi|223532972|gb|EEF34738.1| ring finger protein, putative
[Ricinus communis]
Length = 383
Score = 335 bits (860), Expect = 2e-89
Identities = 192/379 (50%), Positives = 228/379 (60%), Gaps = 36/379 (9%)
Frame = +3
Query: 540 MGSLGNPQSWVPYENIKDCNQGFCSLYCPQWCYIIFXXXXXLA----FADDDSKTNFSPL 707
M SLG P++W+PY N KDC++GFCSLYCPQWCYIIF F DD+S FSPL
Sbjct: 1 MASLGTPKTWIPYVNGKDCSKGFCSLYCPQWCYIIFPPPPPPPPYDEFPDDNSGPTFSPL 60
Query: 708 VIAIIGILASAFLLVSYYTVISKYCGNM--DSARRSANQDPSEESTENQNQSNSELWHVS 881
VIAIIGIL SAFLLVSYYT+ISKYCGN DSARR NQD EE +N N S E WHV+
Sbjct: 61 VIAIIGILVSAFLLVSYYTIISKYCGNNNNDSARRRENQDQIEELEDNHNPSLHEPWHVT 120
Query: 882 TGGLDEALIKLITVCKYRKGEGLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLFCIDTW 1061
T GLDEALIK IT+CKYRKG+GL+EGTDCSVCLSEFQE+ES+RLLPKCSHAFH+ CIDTW
Sbjct: 121 TTGLDEALIKSITMCKYRKGDGLIEGTDCSVCLSEFQEDESIRLLPKCSHAFHVSCIDTW 180
Query: 1062 LKSHPNCPLCRANVI--------ITGPPPLQLPSTVQESPSDNESEQDNHTVVMVEDLER 1217
LKSH NCPLCRAN+I + PPP + S + S + N V + +D+ER
Sbjct: 181 LKSHSNCPLCRANIIFISASLPPLPPPPPPLMESLLPGDEPIQGSNRANANVAVAQDIER 240
Query: 1218 RNEESSHPDDDVIPKIGG----------------SDIIIEIKDE--GAGTTRRSVSMD-- 1337
SS +D+ + G D IIEI+DE RRS S+D
Sbjct: 241 ERVVSS--EDETVQNHGAPKAPLRVFSDLGSLEERDAIIEIRDERYHRQHIRRSFSLDHP 298
Query: 1338 -SGRVSIAEILSTSEDDESDIEMREYQVG-VEXXXXXXXXXXXXXXXXXXVLHCVASPTA 1511
R S+A+IL ++D++ + G VL V SP
Sbjct: 299 CQSRASVADILRINQDEDVILNPENCLSGDAGSSKHSVEVSKSNSHRRKRVLLGVLSPVT 358
Query: 1512 MKRSLSSGRFLFTRQGRAR 1568
MKRS SSGRF T+ GR R
Sbjct: 359 MKRSFSSGRFFLTKHGRVR 377
>gb|ACU17851.1| unknown [Glycine max]
Length = 364
Score = 333 bits (854), Expect = 8e-89
Identities = 183/366 (50%), Positives = 223/366 (60%), Gaps = 23/366 (6%)
Frame = +3
Query: 540 MGSLGNPQSWVPYENIKDCNQGFCSLYCPQWCYIIFXXXXXLAFADDDSKTNFSPLVIAI 719
M SLGNP+SWVPY N KDC+QGFCSLYCPQWCY+I+ F DDDS NFSPLVIA+
Sbjct: 1 MASLGNPKSWVPYMNNKDCSQGFCSLYCPQWCYVIYPPPPPFEFPDDDSSPNFSPLVIAV 60
Query: 720 IGILASAFLLVSYYTVISKYCGNMDSARRSANQDPSEESTENQNQSNSELWHVSTGGLDE 899
IG+L SAFLLVSYYT+ISKYCG+ +S++ S N + + E E+ N S E WH T GLDE
Sbjct: 61 IGVLVSAFLLVSYYTIISKYCGSRESSQ-SENHEENVELEEDHNPSLHEPWHAPTIGLDE 119
Query: 900 ALIKLITVCKYRKGEGLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLFCIDTWLKSHPN 1079
ALIK ITVCKY+KG+GLVE TDCSVCL EFQ++ES+RLLPKCSHAFHL CIDTWLKSH +
Sbjct: 120 ALIKSITVCKYKKGDGLVEVTDCSVCLGEFQDDESVRLLPKCSHAFHLPCIDTWLKSHSS 179
Query: 1080 CPLCRANVIITGPPPLQLPSTVQESPSDNESEQDNHTVVMVEDLERRNEESSHPDDDVIP 1259
CPLCRA++ L + S V E PS N++ N R+ E + +V
Sbjct: 180 CPLCRASIFTFNAAALHVASPVTEPPSRNDTSSGNQRADENIVAVARDSELDAVEGEVTL 239
Query: 1260 KIGG----------SDI--------IIEIKDEGAGTTRRSVSMD-----SGRVSIAEILS 1370
GG SD+ +IEI+DEG + RR+VSMD +SIA++L
Sbjct: 240 THGGAVSKSALRALSDLGNLRGRHSVIEIRDEGYDSIRRTVSMDHSFQRGSGLSIADVLH 299
Query: 1371 TSEDDESDIEMREYQVGVEXXXXXXXXXXXXXXXXXXVLHCVASPTAMKRSLSSGRFLFT 1550
+++ E VLHCV SP AMKRS SGRF +
Sbjct: 300 VNQEHEG-------CSNGAGPSKNSRGESSKSSYRRKVLHCVLSPIAMKRSFFSGRFSLS 352
Query: 1551 RQGRAR 1568
R GR R
Sbjct: 353 RNGRGR 358