BLASTX nr result

ID: Cimicifuga21_contig00022080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022080
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23125.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002269434.1| PREDICTED: uncharacterized protein At2g29880...    66   3e-09
ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containin...    55   4e-06
emb|CBI25954.3| unnamed protein product [Vitis vinifera]               54   1e-05

>emb|CBI23125.3| unnamed protein product [Vitis vinifera]
          Length = 266

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 46/189 (24%)
 Frame = -1

Query: 473 WENYVKLHPNAKRFRTQGFREHKKLEVIFGH----------------------------- 381
           W++Y+K++ +AKRFR +G     +L +IFG                              
Sbjct: 79  WDSYIKVNKSAKRFRKKGCPMFNELGIIFGDPAQCKVVFPLAQYPSGNEEKLELEDASTN 138

Query: 380 -------LQAKENHDFYSPANGNDQSVKRTQPHNRETDKSLRP-KLSEAVVIQAEASKSR 225
                    + +  D+ SP++   +    T   + +  +  R  ++ EA+   AEASK++
Sbjct: 139 ATPSAFPSDSSDEKDYSSPSSRRRRERSPTPTSHIQGKREFRTLEMGEALKEWAEASKAK 198

Query: 224 -------QESG--NKFSVTECMEILDAMDIYIARRTYVRAMQLFQKKDWREAFLHMSAAR 72
                  +ES   N FS+T C+  L++++  +   TY++A+++F+  DWRE F+ MSA R
Sbjct: 199 TPTLSRFEESSQCNAFSITNCVRCLESIE-GVDGSTYIKAIKMFKDVDWREMFMAMSAER 257

Query: 71  RKDLLLSIE 45
           R   L S+E
Sbjct: 258 RLVWLASLE 266


>ref|XP_002269434.1| PREDICTED: uncharacterized protein At2g29880-like [Vitis vinifera]
          Length = 297

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 46/189 (24%)
 Frame = -1

Query: 473 WENYVKLHPNAKRFRTQGFREHKKLEVIFGH----------------------------- 381
           W++Y+K++ +AKRFR +G     +L +IFG                              
Sbjct: 110 WDSYIKVNKSAKRFRKKGCPMFNELGIIFGDPAQCKVVFPLAQYPSGNEEKLELEDASTN 169

Query: 380 -------LQAKENHDFYSPANGNDQSVKRTQPHNRETDKSLRP-KLSEAVVIQAEASKSR 225
                    + +  D+ SP++   +    T   + +  +  R  ++ EA+   AEASK++
Sbjct: 170 ATPSAFPSDSSDEKDYSSPSSRRRRERSPTPTSHIQGKREFRTLEMGEALKEWAEASKAK 229

Query: 224 -------QESG--NKFSVTECMEILDAMDIYIARRTYVRAMQLFQKKDWREAFLHMSAAR 72
                  +ES   N FS+T C+  L++++  +   TY++A+++F+  DWRE F+ MSA R
Sbjct: 230 TPTLSRFEESSQCNAFSITNCVRCLESIE-GVDGSTYIKAIKMFKDVDWREMFMAMSAER 288

Query: 71  RKDLLLSIE 45
           R   L S+E
Sbjct: 289 RLVWLASLE 297


>ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containing protein 43-like
           [Vitis vinifera] gi|297739472|emb|CBI29654.3| unnamed
           protein product [Vitis vinifera]
          Length = 299

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 24/160 (15%)
 Frame = -1

Query: 485 PDSWWENYVKLHPNAKRFRTQGFREHKKLEVIFGHLQAKENHDFYSP---ANGNDQSVKR 315
           P   WE Y++ +P AK+FR +     ++LE +FG + A  + ++ S    A+G ++S   
Sbjct: 127 PAEKWEEYLQKYPEAKQFRFKPLANMEELEALFGGVLATGSKNWSSGGVIASGAEESSTH 186

Query: 314 TQPHNRETDKSLR--PKLSEAVVIQAEASKSRQESGNKF-------------------SV 198
           +     ET  SL     L      +AE SK +Q+ G K                    SV
Sbjct: 187 STSMPSETSISLEEDENLPRNTNDEAEGSKKKQKKGKKEQNQEEMNRIINVLENFEGPSV 246

Query: 197 TECMEILDAMDIYIARRTYVRAMQLFQKKDWREAFLHMSA 78
            ECM+IL  +  Y     YV      +KK++RE ++ M +
Sbjct: 247 KECMKILKKLLTYEDPLYYVAINGFCKKKEYREVWVEMES 286


>emb|CBI25954.3| unnamed protein product [Vitis vinifera]
          Length = 237

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 24/160 (15%)
 Frame = -1

Query: 485 PDSWWENYVKLHPNAKRFRTQGFREHKKLEVIFGHLQAKENHDFYSP---ANGNDQSVKR 315
           P   WE Y++ +P AK+FR +     ++LE +FG + A  + ++ S    A+G ++S   
Sbjct: 16  PAEKWEEYLQKYPEAKQFRFKPLANVEELEALFGGVLATRSKNWSSGGVIASGAEESSTH 75

Query: 314 TQPHNRETDKSLR--PKLSEAVVIQAEASKSRQESGNK-------------------FSV 198
           +     ET  SL     L      + E SK +Q+ G K                    +V
Sbjct: 76  STSMPSETSVSLEEDEDLPRNTNDETEGSKKKQKKGKKEQTQEEMYRIVNVLENFEGSTV 135

Query: 197 TECMEILDAMDIYIARRTYVRAMQLFQKKDWREAFLHMSA 78
            ECM+IL  +  Y     YV      +KK++RE ++ M +
Sbjct: 136 KECMKILKRLLTYEDPLYYVAINAFCKKKEYREVWMEMES 175


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