BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022049
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324371.1| glutamate-gated kainate-type ion channel rec...   167   1e-39
ref|XP_002308723.1| glutamate-gated kainate-type ion channel rec...   167   1e-39
ref|XP_002324368.1| glutamate-gated kainate-type ion channel rec...   166   1e-39
ref|XP_002324361.1| glutamate-gated kainate-type ion channel rec...   166   2e-39
ref|XP_002334674.1| glutamate-gated kainate-type ion channel rec...   165   3e-39

>ref|XP_002324371.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865805|gb|EEF02936.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 883

 Score =  167 bits (422), Expect = 1e-39
 Identities = 81/104 (77%), Positives = 93/104 (89%)
 Frame = -2

Query: 329 AIVQAFGWREVVPIYEDTDYGKDMIPYLTDAIQDVNARVPYRSVISSSFTDDQIRGELYK 150
           A+VQAFGWREVVPIY D +YG+ +IPYLTDA+Q V+ARVPYRSVIS S TDDQI  ELYK
Sbjct: 127 ALVQAFGWREVVPIYIDNEYGEGVIPYLTDALQAVDARVPYRSVISPSATDDQIVSELYK 186

Query: 149 LMTMQTRVFLVHMRSSLGSRLFAIAKEVGMMTEGYVWIMTDGLT 18
           LMTMQTRVF+VHM  SLG+R+FA AKE+GM++EGYVWIMTDGLT
Sbjct: 187 LMTMQTRVFIVHMFPSLGARVFAKAKEIGMVSEGYVWIMTDGLT 230


>ref|XP_002308723.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222854699|gb|EEE92246.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 866

 Score =  167 bits (422), Expect = 1e-39
 Identities = 81/104 (77%), Positives = 92/104 (88%)
 Frame = -2

Query: 329 AIVQAFGWREVVPIYEDTDYGKDMIPYLTDAIQDVNARVPYRSVISSSFTDDQIRGELYK 150
           AIVQAFGWRE VPIY D +YG+ +IPYLTDA+Q+V+ARVPYRSVIS S TDDQI  ELYK
Sbjct: 138 AIVQAFGWREAVPIYIDNEYGEGIIPYLTDALQEVDARVPYRSVISPSATDDQIVEELYK 197

Query: 149 LMTMQTRVFLVHMRSSLGSRLFAIAKEVGMMTEGYVWIMTDGLT 18
           LMTMQTRVF+VHM  SLG+RLF  AKE+GMM+EGYVWIMTDGL+
Sbjct: 198 LMTMQTRVFIVHMYPSLGTRLFTKAKEIGMMSEGYVWIMTDGLS 241


>ref|XP_002324368.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865802|gb|EEF02933.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 885

 Score =  166 bits (421), Expect = 1e-39
 Identities = 80/103 (77%), Positives = 93/103 (90%)
 Frame = -2

Query: 329 AIVQAFGWREVVPIYEDTDYGKDMIPYLTDAIQDVNARVPYRSVISSSFTDDQIRGELYK 150
           A+VQAFGWREVVPIY D +YG+ +IPYLTDA+Q V+ARVPYRSVIS S TDDQI  ELYK
Sbjct: 129 ALVQAFGWREVVPIYIDNEYGEGVIPYLTDALQAVDARVPYRSVISPSATDDQIVSELYK 188

Query: 149 LMTMQTRVFLVHMRSSLGSRLFAIAKEVGMMTEGYVWIMTDGL 21
           LMTMQTRVF+VHM  SLG+R+F+IAKE+GM++EGYVWIMTDGL
Sbjct: 189 LMTMQTRVFIVHMFPSLGARVFSIAKEIGMVSEGYVWIMTDGL 231


>ref|XP_002324361.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865795|gb|EEF02926.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 856

 Score =  166 bits (419), Expect = 2e-39
 Identities = 83/110 (75%), Positives = 96/110 (87%), Gaps = 1/110 (0%)
 Frame = -2

Query: 329 AIVQAFGWREVVPIYEDTDYGKDMIPYLTDAIQDVNARVPYRSVISSSFTDDQIRGELYK 150
           A+VQAFGWR  VPIY D +YG+ +IPYLT+A+Q V+ARVPY+SVIS S TDDQI  ELYK
Sbjct: 160 ALVQAFGWRAAVPIYIDNEYGEGIIPYLTEALQAVDARVPYQSVISPSATDDQIVKELYK 219

Query: 149 LMTMQTRVFLVHMRSSLGSRLFAIAKEVGMMTEGYVWIMTDGLT-DLLTT 3
           LMTMQTRVF+VHM  SLG+RLFA AKE+GMM+EGYVWIMTDGLT DLL+T
Sbjct: 220 LMTMQTRVFIVHMYQSLGTRLFAKAKEIGMMSEGYVWIMTDGLTADLLST 269


>ref|XP_002334674.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222874107|gb|EEF11238.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 257

 Score =  165 bits (418), Expect = 3e-39
 Identities = 80/104 (76%), Positives = 92/104 (88%)
 Frame = -2

Query: 329 AIVQAFGWREVVPIYEDTDYGKDMIPYLTDAIQDVNARVPYRSVISSSFTDDQIRGELYK 150
           AIVQAFGWRE VPIY D +YG+ +IPYLTDA+Q+V+ARVPYRSVIS S TDDQI  ELYK
Sbjct: 51  AIVQAFGWREAVPIYIDNEYGEGIIPYLTDALQEVDARVPYRSVISPSATDDQIVEELYK 110

Query: 149 LMTMQTRVFLVHMRSSLGSRLFAIAKEVGMMTEGYVWIMTDGLT 18
           LMTMQTRVF+VHM  SLG+RLF  AKE+GM++EGYVWIMTDGL+
Sbjct: 111 LMTMQTRVFIVHMYRSLGTRLFTKAKEIGMVSEGYVWIMTDGLS 154