BLASTX nr result

ID: Cimicifuga21_contig00022029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022029
         (1118 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274414.2| PREDICTED: probable disease resistance RPP8-...   125   2e-26
ref|XP_002269653.2| PREDICTED: disease resistance RPP8-like prot...   113   1e-22
ref|NP_001237442.1| NBS-LRR disease-resistance protein scn3r1 [G...   112   2e-22
emb|CAN70214.1| hypothetical protein VITISV_038742 [Vitis vinifera]   112   2e-22
emb|CBI37930.3| unnamed protein product [Vitis vinifera]              108   2e-21

>ref|XP_002274414.2| PREDICTED: probable disease resistance RPP8-like protein 2-like
            [Vitis vinifera]
          Length = 922

 Score =  125 bits (313), Expect = 2e-26
 Identities = 86/236 (36%), Positives = 120/236 (50%), Gaps = 30/236 (12%)
 Frame = +3

Query: 3    IPSSIGDCVTLQTLDLRSKLIRDAPVSIWKLKKLRHLHFQGQVRLPQPQSTDSSLEELQT 182
            +P SI   + LQTLDLRS L+   P+ IWK++KLRHL+F     +     TD+SL  LQT
Sbjct: 617  LPPSIQFLLNLQTLDLRSTLLNPIPIVIWKMQKLRHLYFNELEEMAVNPPTDASLANLQT 676

Query: 183  LSTIC--TSSCTQEILSKVPNVTKLGVRGDLRSCEEALSSSFSVLKNLRSLKL------- 335
            L  IC   +S  +  LSK+ N+ +LG+ GDL   EEA+       + L  LKL       
Sbjct: 677  LHGICINQTSYVENGLSKLTNLRELGLHGDLLLHEEAIGKWIFSSERLECLKLHTRDVMG 736

Query: 336  --------------------IRVAVFEAMTLLPREFPPTLTKLTLFDTGLWRDPMPLLGK 455
                                + +  F A       FP  LT+L+L  + L  DPM  L  
Sbjct: 737  DFAKNAIPKLNFSSHPHLIKLHLKGFMAKLFDAEYFPQNLTELSLKGSFLMEDPMVKLEM 796

Query: 456  LKNLEILKIKSNAYMDHLMVCCAEGFPRLQLLELSQLK-VRRLIVEPGALPNLERL 620
            L++L +LK+K +AY+   M+C   GFP+L  L+LS L  V R  +E GA+  L +L
Sbjct: 797  LQSLRVLKLKHSAYLGKEMICSCGGFPQLHFLKLSFLNTVERWRIEDGAMGRLRQL 852


>ref|XP_002269653.2| PREDICTED: disease resistance RPP8-like protein 3-like [Vitis
            vinifera]
          Length = 856

 Score =  113 bits (282), Expect = 1e-22
 Identities = 85/264 (32%), Positives = 128/264 (48%), Gaps = 37/264 (14%)
 Frame = +3

Query: 3    IPSSIGDCVTLQTLDLRSKLIRDAPVSIWKLKKLRHLHFQGQVRLPQPQSTDSSLEELQT 182
            +PSSI +   LQTLD+R+  +   P+ +W +  LRHL+ +       P     S+  LQT
Sbjct: 573  LPSSIQNFCNLQTLDIRATKVSRLPIQLWNMPGLRHLYLEKTSIAGHPP-VHVSVMHLQT 631

Query: 183  LSTICT--SSCTQEILSKVPNVTKLGVRGDLRSCEEALSSSFSVLKNLRSLKLIRVAVFE 356
            LST+    +    ++L K+ N+ KLG+ G   S  EALS     L NL++L+L    +  
Sbjct: 632  LSTVSIYGNQWIPDLLGKLTNLRKLGIHGYFASQTEALSRCLVKLSNLQNLQLRGTELIL 691

Query: 357  AMTLL----------------------PREFPPTLTKLTLFDTGLWRDPMPLLGKLKNLE 470
              T+                       P+E  P LTK+ L ++ L +D   +LGKL NL+
Sbjct: 692  EPTIKLLLNQPNIHKLHLSGPIEKLPDPQEIQPNLTKIILENSLLVQDIFVILGKLPNLQ 751

Query: 471  ILKIKSNAYMDHLMVCCAEGFPRLQLLELSQL-KVRRLIVEPGALPNLERLVTHDSGHLL 647
            +LK+  N++    + C A GFP+L  LELS+L  +    V+ GA+P+L  L+      L 
Sbjct: 752  MLKLLINSFFGKEITCSASGFPKLHGLELSELVNLEEWRVDDGAMPSLRHLIIDHCDQLK 811

Query: 648  SV-EG-----------LSNMPTPF 683
             + EG           L NMP  F
Sbjct: 812  KIPEGFQYLTALRELFLLNMPDEF 835


>ref|NP_001237442.1| NBS-LRR disease-resistance protein scn3r1 [Glycine max]
            gi|212293340|gb|ACJ24527.1| NBS-LRR disease-resistance
            protein scn3r1 [Glycine max]
          Length = 761

 Score =  112 bits (280), Expect = 2e-22
 Identities = 85/273 (31%), Positives = 137/273 (50%), Gaps = 24/273 (8%)
 Frame = +3

Query: 3    IPSSIGDCVTLQTLDLRSKLIRDAPVSIWKLKKLRHLHFQGQVRLPQPQSTDSSLEELQT 182
            IP+SI     L+TLDLR   I+     +W+LK+LRHL   G V LP   S   +++ LQT
Sbjct: 491  IPASICRLWNLETLDLRGSPIKSFSGDLWQLKQLRHLLMFGPVGLPDMPSESKTMQNLQT 550

Query: 183  LSTICTSSCTQEILS--KVPNVTKLGVRGDLR-SCEEALS-SSFSVLKNLRSLKLIRVAV 350
            LST+     T  +L   + P +TKLG+  + R  C   +   S + L +LR LK+I    
Sbjct: 551  LSTVALDPRTTSLLDSRRFPRLTKLGIHHERRDKCNARIQLQSLNRLSHLRKLKVI---- 606

Query: 351  FEAMTLLPRE---FPPTLTKLTLFDTGLWR-DPMPLLGKLKNLEILKIKSNAYMDHLMVC 518
                T +P+    FP  +TK++L   G +  + M +LGKL +L++LK+ S        + 
Sbjct: 607  --GTTEIPQNANVFPSNITKISLTKFGCFNSNAMHILGKLPSLQVLKLSSQTNDTRFDLH 664

Query: 519  CAE-GFPRLQLLELSQLKVRRLIVEPGALPNLERLVTHDSGHLLSVEGLSNMPTPF---- 683
            CA  GF +LQ+ E+  +KV+   ++ G++P + RL       + S + L+ +P       
Sbjct: 665  CATGGFLQLQVFEMIAIKVKNWRLDKGSMPRIRRL------DVRSCKSLTELPKELWSLT 718

Query: 684  ----IPVSWPADE-------SLIDRECNLMAWP 749
                + V WP  E        +++  C L+ +P
Sbjct: 719  SLREVQVLWPCTELVKRLQNLVVNNGCKLVVYP 751


>emb|CAN70214.1| hypothetical protein VITISV_038742 [Vitis vinifera]
          Length = 902

 Score =  112 bits (280), Expect = 2e-22
 Identities = 85/264 (32%), Positives = 127/264 (48%), Gaps = 37/264 (14%)
 Frame = +3

Query: 3    IPSSIGDCVTLQTLDLRSKLIRDAPVSIWKLKKLRHLHFQGQVRLPQPQSTDSSLEELQT 182
            +PSS+ +   LQTLD+R+  +   P+ +W +  LRHL+ +       P     S+  LQT
Sbjct: 619  LPSSVQNFCNLQTLDIRATKVSRLPIQLWNMPGLRHLYLEKTSIAGHPP-VHVSVMHLQT 677

Query: 183  LSTICT--SSCTQEILSKVPNVTKLGVRGDLRSCEEALSSSFSVLKNLRSLKLIRVAVFE 356
            LST+    +    ++L K+ N+ KLG+ G   S  EALS     L NL++L+L    +  
Sbjct: 678  LSTVSIYGNQWIPDLLGKLTNLRKLGIHGYFASQTEALSRCLVKLSNLQNLQLRGTELIL 737

Query: 357  AMTLL----------------------PREFPPTLTKLTLFDTGLWRDPMPLLGKLKNLE 470
              T+                       P+E  P LTK+ L  + L +D   +LGKL NL+
Sbjct: 738  EPTIKLLLNQPNIHKLHLSGPIEKLPDPQEIQPNLTKIILEKSLLVQDIFVILGKLPNLQ 797

Query: 471  ILKIKSNAYMDHLMVCCAEGFPRLQLLELSQL-KVRRLIVEPGALPNLERLVTHDSGHLL 647
            +LK+  N++    + C A GFP+L  LELS+L  +    V+ GA+P+L  LV      L 
Sbjct: 798  MLKLLINSFFGKEITCSASGFPKLHGLELSELVNLEEWRVDDGAMPSLRHLVIDHCDQLK 857

Query: 648  SV-EG-----------LSNMPTPF 683
             + EG           L NMP  F
Sbjct: 858  KIPEGFQYLTALRELFLLNMPDEF 881


>emb|CBI37930.3| unnamed protein product [Vitis vinifera]
          Length = 1560

 Score =  108 bits (270), Expect = 2e-21
 Identities = 81/245 (33%), Positives = 129/245 (52%), Gaps = 22/245 (8%)
 Frame = +3

Query: 3    IPSSIGDCVTLQTLDLRSKLIRDAPVSIWKLKKLRHLHFQGQVRLPQPQSTDSSLEELQT 182
            +P SIG+  +LQTLD+ +  +++ P  IWK+K +R+L+ +GQ     P   D+ L+ L+ 
Sbjct: 1240 LPPSIGNLKSLQTLDINN--LKEVPNVIWKMKNMRYLYIEGQEE-DVPLQIDT-LQNLEI 1295

Query: 183  LSTICTSSCTQEILSKVPNVTKLGVRGDLRSCEEALSSSFSVLKNLRSL----------- 329
            LS I  +   +   S +  + KL + G         S+S + L +L+SL           
Sbjct: 1296 LSCITFNQWIKNDSSNLTCLEKLKLEGRCEVEGVVFSNSIAKLPSLKSLYLKASDESNIP 1355

Query: 330  --------KLIRVAVFEAMTLLPR--EFPPTLTKLTLFDTGLWRDPMPLLGKLKNLEILK 479
                     L ++ +   M  LP   EF P LT+LT+  + L  DPMP+L K   L IL+
Sbjct: 1356 PLAINSCLHLSKLDIKGHMQKLPETVEFSPNLTQLTMEASRLGCDPMPILEKQPKLLILR 1415

Query: 480  IKSNAYMDHLMVCCAEGFPRLQLLELSQLK-VRRLIVEPGALPNLERLVTHDSGHLLSVE 656
            +++N Y+   M   A GFP+L++L+LS+LK + +L +  GALP L +L   D   +L   
Sbjct: 1416 LRANTYLGKKMQVSANGFPQLKILQLSELKELTKLNIGQGALPWLMQLQIRDKVKILGFN 1475

Query: 657  GLSNM 671
            GL N+
Sbjct: 1476 GLLNL 1480


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