BLASTX nr result

ID: Cimicifuga21_contig00022023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022023
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521203.1| PREDICTED: TBCC domain-containing protein 1-...    82   5e-14
ref|XP_003554198.1| PREDICTED: TBCC domain-containing protein 1-...    82   6e-14
ref|XP_002876443.1| hypothetical protein ARALYDRAFT_486241 [Arab...    81   1e-13
ref|XP_003625224.1| TBCC domain-containing protein [Medicago tru...    80   1e-13
ref|NP_001190120.1| Tubulin binding cofactor C domain-containing...    80   2e-13

>ref|XP_003521203.1| PREDICTED: TBCC domain-containing protein 1-like [Glycine max]
          Length = 566

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/56 (66%), Positives = 45/56 (80%)
 Frame = -1

Query: 205 TVNITITKAVLRVEHCEHVHMVLAAKQICIANCRECTFFLSLN*RPLILGNNHKLQ 38
           TV I      +RVEHCE VH+++AAK+ICIANCREC FFL +N +PLILG+NHKLQ
Sbjct: 361 TVVIGAVGKAVRVEHCERVHVIVAAKRICIANCRECVFFLGVNQQPLILGDNHKLQ 416


>ref|XP_003554198.1| PREDICTED: TBCC domain-containing protein 1-like [Glycine max]
          Length = 566

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/56 (64%), Positives = 45/56 (80%)
 Frame = -1

Query: 205 TVNITITKAVLRVEHCEHVHMVLAAKQICIANCRECTFFLSLN*RPLILGNNHKLQ 38
           T+ I      +RVEHCE VH+++AAK+ICIANCREC FFL +N +PLILG+NHKLQ
Sbjct: 361 TIVIGAVGKAVRVEHCERVHVIVAAKRICIANCRECVFFLGVNQQPLILGDNHKLQ 416


>ref|XP_002876443.1| hypothetical protein ARALYDRAFT_486241 [Arabidopsis lyrata subsp.
           lyrata] gi|297322281|gb|EFH52702.1| hypothetical protein
           ARALYDRAFT_486241 [Arabidopsis lyrata subsp. lyrata]
          Length = 571

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 34/56 (60%), Positives = 45/56 (80%)
 Frame = -1

Query: 205 TVNITITKAVLRVEHCEHVHMVLAAKQICIANCRECTFFLSLN*RPLILGNNHKLQ 38
           T+ +      L+VEHCE VH+++AAK++CIANCREC FFL +N RPLI+G+NHKLQ
Sbjct: 366 TIVLGAVGKALKVEHCERVHVIVAAKRVCIANCRECVFFLGVNQRPLIVGDNHKLQ 421


>ref|XP_003625224.1| TBCC domain-containing protein [Medicago truncatula]
           gi|124360656|gb|ABN08645.1| Tubulin binding cofactor C
           [Medicago truncatula] gi|355500239|gb|AES81442.1| TBCC
           domain-containing protein [Medicago truncatula]
          Length = 558

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 35/56 (62%), Positives = 45/56 (80%)
 Frame = -1

Query: 205 TVNITITKAVLRVEHCEHVHMVLAAKQICIANCRECTFFLSLN*RPLILGNNHKLQ 38
           T+ I      +RVEHCE VH+++AAK+ICIANCREC FFL +N +PLI+G+NHKLQ
Sbjct: 353 TIVIGAVGKAVRVEHCERVHVIVAAKRICIANCRECVFFLGVNQQPLIVGDNHKLQ 408


>ref|NP_001190120.1| Tubulin binding cofactor C domain-containing protein [Arabidopsis
           thaliana] gi|332646193|gb|AEE79714.1| Tubulin binding
           cofactor C domain-containing protein [Arabidopsis
           thaliana]
          Length = 609

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 33/56 (58%), Positives = 45/56 (80%)
 Frame = -1

Query: 205 TVNITITKAVLRVEHCEHVHMVLAAKQICIANCRECTFFLSLN*RPLILGNNHKLQ 38
           T+ +      ++VEHCE VH+++AAK++CIANCREC FFL +N RPLI+G+NHKLQ
Sbjct: 404 TIVLGAVGKAIKVEHCERVHVIVAAKRVCIANCRECVFFLGVNQRPLIVGDNHKLQ 459


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