BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022010
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   160   8e-38
ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containin...   160   8e-38
ref|NP_179241.4| DNA binding / nucleic acid binding / protein bi...   144   6e-33
ref|XP_003604006.1| Flavonol synthase/flavanone 3-hydroxylase [M...   140   1e-31
emb|CBI37995.3| unnamed protein product [Vitis vinifera]              136   2e-30

>ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
            protein 19-like [Cucumis sativus]
          Length = 1475

 Score =  160 bits (406), Expect = 8e-38
 Identities = 71/136 (52%), Positives = 107/136 (78%)
 Frame = -2

Query: 412  SIKCGLLGQMRVGEVQEKAMALQEVRVNDWLEKEKLRLSNFRDWANEKGQKKKVSECIKK 233
            S+KCG++ ++ VG++QE+AM+LQ+ RV DW+E E +RLS+ RD A+EKG++K++ EC++K
Sbjct: 653  SMKCGIINRLTVGDLQERAMSLQDARVKDWMETEIVRLSHLRDRASEKGRRKELRECVEK 712

Query: 232  LQLLSTPEERLRRVQEIPEIHADPDMVPSNDSQKDGKLDDKRQDTCMRKRDIGFNSKGKK 53
            LQLL TPEER RR++EIPEIHADP+M PS++S+ + + DDKR++T    R   F  + ++
Sbjct: 713  LQLLKTPEERQRRIEEIPEIHADPNMDPSHESEDEDEADDKRRETYTLSRSTSFGRRTRE 772

Query: 52   PISPEKGGSTSNVTWT 5
            P+SP KGGS  N +W+
Sbjct: 773  PVSPGKGGSHLNDSWS 788


>ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
            [Cucumis sativus]
          Length = 1470

 Score =  160 bits (406), Expect = 8e-38
 Identities = 71/136 (52%), Positives = 107/136 (78%)
 Frame = -2

Query: 412  SIKCGLLGQMRVGEVQEKAMALQEVRVNDWLEKEKLRLSNFRDWANEKGQKKKVSECIKK 233
            S+KCG++ ++ VG++QE+AM+LQ+ RV DW+E E +RLS+ RD A+EKG++K++ EC++K
Sbjct: 653  SMKCGIINRLTVGDLQERAMSLQDARVKDWMETEIVRLSHLRDRASEKGRRKELRECVEK 712

Query: 232  LQLLSTPEERLRRVQEIPEIHADPDMVPSNDSQKDGKLDDKRQDTCMRKRDIGFNSKGKK 53
            LQLL TPEER RR++EIPEIHADP+M PS++S+ + + DDKR++T    R   F  + ++
Sbjct: 713  LQLLKTPEERQRRIEEIPEIHADPNMDPSHESEDEDEADDKRRETYTLSRSTSFGRRTRE 772

Query: 52   PISPEKGGSTSNVTWT 5
            P+SP KGGS  N +W+
Sbjct: 773  PVSPGKGGSHLNDSWS 788


>ref|NP_179241.4| DNA binding / nucleic acid binding / protein binding / zinc ion
            binding protein [Arabidopsis thaliana]
            gi|391358194|sp|Q9SIV5.3|C3H19_ARATH RecName: Full=Zinc
            finger CCCH domain-containing protein 19; Short=AtC3H19;
            AltName: Full=Protein Needed for RDR2-independent DNA
            methylation gi|330251407|gb|AEC06501.1| DNA binding /
            nucleic acid binding / protein binding / zinc ion binding
            protein [Arabidopsis thaliana]
          Length = 1773

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/151 (47%), Positives = 104/151 (68%), Gaps = 15/151 (9%)
 Frame = -2

Query: 412  SIKCGLLGQMRVGEVQEKAMALQEVRVNDWLEKEKLRLSNFRDWANEKGQKKK------- 254
            SIKCGL+ ++ VG++QEKA+ALQEVRV + LE E LR S+ RD A++ G++K+       
Sbjct: 1050 SIKCGLINRLTVGDIQEKAIALQEVRVKNLLEAEILRFSHLRDRASDMGRRKEYPYLLKL 1109

Query: 253  --------VSECIKKLQLLSTPEERLRRVQEIPEIHADPDMVPSNDSQKDGKLDDKRQDT 98
                    + EC++KLQLL +PEER RR++EIPEIHADP M P  +S+ + + ++K ++ 
Sbjct: 1110 SNSLTMLTLRECVEKLQLLKSPEERQRRLEEIPEIHADPKMDPDCESEDEDEKEEKEKEK 1169

Query: 97   CMRKRDIGFNSKGKKPISPEKGGSTSNVTWT 5
             +R R   FN +G+ PISP KGG +SN +WT
Sbjct: 1170 QLRPRSSSFNRRGRDPISPRKGGFSSNESWT 1200


>ref|XP_003604006.1| Flavonol synthase/flavanone 3-hydroxylase [Medicago truncatula]
            gi|355493054|gb|AES74257.1| Flavonol synthase/flavanone
            3-hydroxylase [Medicago truncatula]
          Length = 1942

 Score =  140 bits (352), Expect = 1e-31
 Identities = 72/142 (50%), Positives = 101/142 (71%), Gaps = 6/142 (4%)
 Frame = -2

Query: 412  SIKCGLLGQMRVGEVQEKAMALQEVRVNDWLEKEKLRLSNFRDWANEKGQKKKV-----S 248
            SIKCGL+ +M VG++Q+KA+ LQ VRV DWLE E +RLS+ RD A+E G++K+       
Sbjct: 1191 SIKCGLINRMTVGDIQDKALTLQAVRVKDWLETEIVRLSHLRDRASENGRRKEYPFFIRK 1250

Query: 247  ECIKKLQLLSTPEERLRRVQEIPEIHADPDMVPSNDSQKDGKLDDKRQDTCMRKR-DIGF 71
            +C++KLQLL TPEER RR++EIPEIH DP M PS +S +  +++DKRQ+  MR R    F
Sbjct: 1251 KCVEKLQLLKTPEERQRRLEEIPEIHVDPKMDPSYESDEGDEMEDKRQENFMRPRGSSAF 1310

Query: 70   NSKGKKPISPEKGGSTSNVTWT 5
              KG++  SP + GS S+ +W+
Sbjct: 1311 GRKGREIASP-RSGSISSDSWS 1331


>emb|CBI37995.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score =  136 bits (343), Expect = 2e-30
 Identities = 76/170 (44%), Positives = 102/170 (60%), Gaps = 34/170 (20%)
 Frame = -2

Query: 412  SIKCGLLGQMRVGEVQEKAMALQEVRVNDWLEKEKLRLSNFRDWANEKGQKKKVS----- 248
            SIKCGL+  + VG + EKA+ALQ VRV DWLE E +RLS+ RD A+EKG++K+       
Sbjct: 587  SIKCGLITPLTVGGILEKALALQAVRVKDWLETEIVRLSHLRDRASEKGRRKEYPFFVQL 646

Query: 247  ----------------------------ECIKKLQLLSTPEERLRRVQEIPEIHADPDMV 152
                                        EC++KLQ L T EER RR++EIPE+HADP+M 
Sbjct: 647  MHSSIIILNMQVASCYHMSYFLKTLPFWECVEKLQRLKTAEERQRRLEEIPEVHADPNMD 706

Query: 151  PSNDSQKD-GKLDDKRQDTCMRKRDIGFNSKGKKPISPEKGGSTSNVTWT 5
            PS +S++D  + DDKRQ+  +R RD GF+ K  +P S  KG S SN +W+
Sbjct: 707  PSYESEEDESETDDKRQENHLRPRDTGFSRKRMEPSSSRKGDSGSNYSWS 756