BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00022008
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268218.1| PREDICTED: nifU-like protein 3, chloroplasti...   191   7e-49
ref|XP_002532084.1| Nitrogen fixation protein nifU, putative [Ri...   191   2e-47
gb|ABK95780.1| unknown [Populus trichocarpa]                          189   3e-47
ref|XP_004148324.1| PREDICTED: nifU-like protein 3, chloroplasti...   191   2e-46
ref|XP_002329667.1| predicted protein [Populus trichocarpa] gi|2...   189   5e-46

>ref|XP_002268218.1| PREDICTED: nifU-like protein 3, chloroplastic [Vitis vinifera]
           gi|297735420|emb|CBI17860.3| unnamed protein product
           [Vitis vinifera]
          Length = 237

 Score =  191 bits (484), Expect(2) = 7e-49
 Identities = 98/117 (83%), Positives = 99/117 (84%)
 Frame = +2

Query: 404 GVLVAPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSST 583
           G+LV PSCVLPLTEENVEKVLDEVRP LMADGGNVALHEIDGLVVVLKLQGACGSCPSST
Sbjct: 74  GILVLPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSST 133

Query: 584 MTLKMGIETRLRDKIPEIMEVEQILDTETGXXXXXXXXXXXXXXIRPYLAGTGGGVL 754
           MTLKMGIETRLRDKIPEI  VEQILDTETG              IRPYLAGTGGGVL
Sbjct: 134 MTLKMGIETRLRDKIPEIEAVEQILDTETGLELNEENVEKVLAEIRPYLAGTGGGVL 190



 Score = 29.6 bits (65), Expect(2) = 7e-49
 Identities = 21/67 (31%), Positives = 30/67 (44%)
 Frame = +3

Query: 90  GFSTQIQGLNTTSTTPRFNSSKTISAAHLSLYKHIKYSFPLQNSNSKRLSSKQNTFARGL 269
           GF+         +    F SS  I ++HLS+ K      P+  S+    SS+ N+F RG 
Sbjct: 2   GFTAFTPSTAANNVNSSFPSSLWIPSSHLSISKK-----PI--SDCSAFSSRDNSFMRGQ 54

Query: 270 VDIRHFL 290
              RH L
Sbjct: 55  FQSRHLL 61


>ref|XP_002532084.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
           gi|223528244|gb|EEF30298.1| Nitrogen fixation protein
           nifU, putative [Ricinus communis]
          Length = 220

 Score =  191 bits (484), Expect(2) = 2e-47
 Identities = 97/117 (82%), Positives = 100/117 (85%)
 Frame = +2

Query: 404 GVLVAPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSST 583
           G++V+PSCVLPLTEENVEKVLDEVRP LMADGGNV LHEIDGLVVVLKLQGACGSCPSST
Sbjct: 58  GLVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVVLHEIDGLVVVLKLQGACGSCPSST 117

Query: 584 MTLKMGIETRLRDKIPEIMEVEQILDTETGXXXXXXXXXXXXXXIRPYLAGTGGGVL 754
           MTLKMGIETRLRDKIPEIM VEQILDTETG              IRPYLAGTGGGVL
Sbjct: 118 MTLKMGIETRLRDKIPEIMAVEQILDTETGLELNDENVEKVLAEIRPYLAGTGGGVL 174



 Score = 24.6 bits (52), Expect(2) = 2e-47
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 237 SSKQNTFARGLVDIRHF 287
           SS++N F RG   IRHF
Sbjct: 28  SSRKNAFLRGQFHIRHF 44



 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = +2

Query: 431 LPLTEENVEKVLDEVRPSLMADGGNVA-LHEIDGLVVVLKLQGACGSCPSSTMTLKMGIE 607
           L L +ENVEKVL E+RP L   GG V  L +ID  +V ++L G      +  MT+++ + 
Sbjct: 148 LELNDENVEKVLAEIRPYLAGTGGGVLELVQIDDYIVKVRLSGPA----AGVMTVRVALT 203

Query: 608 TRLRDKIPEIMEVEQI 655
            +LRDKIP I  V+ I
Sbjct: 204 QKLRDKIPAIAAVQLI 219


>gb|ABK95780.1| unknown [Populus trichocarpa]
          Length = 224

 Score =  189 bits (480), Expect(2) = 3e-47
 Identities = 95/117 (81%), Positives = 101/117 (86%)
 Frame = +2

Query: 404 GVLVAPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSST 583
           GV+V+PSCVLPLTEENVEKVLDEVRP LM DGGNVALHEIDGLVVVLKLQGACGSCPSS+
Sbjct: 62  GVVVSPSCVLPLTEENVEKVLDEVRPGLMRDGGNVALHEIDGLVVVLKLQGACGSCPSSS 121

Query: 584 MTLKMGIETRLRDKIPEIMEVEQILDTETGXXXXXXXXXXXXXXIRPYLAGTGGGVL 754
           MTLKMGIET+LRDKIPEIM+VEQI+DTETG              IRPYLAGTGGGVL
Sbjct: 122 MTLKMGIETKLRDKIPEIMDVEQIMDTETGLELNEENVEKALAEIRPYLAGTGGGVL 178



 Score = 25.8 bits (55), Expect(2) = 3e-47
 Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +3

Query: 219 SNSKRLSSKQNTFARGLVDI--RHFL 290
           S+S  LSSKQN F RG      RHFL
Sbjct: 24  SDSCGLSSKQNAFLRGQFQFHSRHFL 49


>ref|XP_004148324.1| PREDICTED: nifU-like protein 3, chloroplastic-like [Cucumis
           sativus] gi|449510563|ref|XP_004163700.1| PREDICTED:
           nifU-like protein 3, chloroplastic-like [Cucumis
           sativus]
          Length = 227

 Score =  191 bits (484), Expect = 2e-46
 Identities = 100/134 (74%), Positives = 107/134 (79%), Gaps = 3/134 (2%)
 Frame = +2

Query: 362 SEHFQTF--FCLFVAQ-GVLVAPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGL 532
           S HF  F   C  +   G +V+PSCVLPLTEENVEKVLDEVRP LMADGGNVALHEIDGL
Sbjct: 48  SRHFLRFNSSCTRIRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGL 107

Query: 533 VVVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEIMEVEQILDTETGXXXXXXXXXXXXX 712
           VV+LKLQGACGSCPSSTMTLKMGIETRLRDKIPEI+EVEQI+DTETG             
Sbjct: 108 VVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLS 167

Query: 713 XIRPYLAGTGGGVL 754
            IRPYLAGTGGG+L
Sbjct: 168 EIRPYLAGTGGGIL 181


>ref|XP_002329667.1| predicted protein [Populus trichocarpa] gi|222870548|gb|EEF07679.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score =  189 bits (480), Expect = 5e-46
 Identities = 95/117 (81%), Positives = 101/117 (86%)
 Frame = +2

Query: 404 GVLVAPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSST 583
           GV+V+PSCVLPLTEENVEKVLDEVRP LM DGGNVALHEIDGLVVVLKLQGACGSCPSS+
Sbjct: 5   GVVVSPSCVLPLTEENVEKVLDEVRPGLMRDGGNVALHEIDGLVVVLKLQGACGSCPSSS 64

Query: 584 MTLKMGIETRLRDKIPEIMEVEQILDTETGXXXXXXXXXXXXXXIRPYLAGTGGGVL 754
           MTLKMGIET+LRDKIPEIM+VEQI+DTETG              IRPYLAGTGGGVL
Sbjct: 65  MTLKMGIETKLRDKIPEIMDVEQIMDTETGLELNEENVEKALAEIRPYLAGTGGGVL 121