BLASTX nr result

ID: Cimicifuga21_contig00021473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021473
         (1067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510806.1| conserved hypothetical protein [Ricinus comm...    72   3e-10
gb|AFK44482.1| unknown [Medicago truncatula]                           70   1e-09
gb|ACJ85472.1| unknown [Medicago truncatula]                           70   1e-09
emb|CBI31784.3| unnamed protein product [Vitis vinifera]               68   4e-09
ref|XP_002262912.1| PREDICTED: F-box/LRR-repeat protein At3g4888...    68   4e-09

>ref|XP_002510806.1| conserved hypothetical protein [Ricinus communis]
           gi|223549921|gb|EEF51408.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 316

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 65/238 (27%), Positives = 103/238 (43%), Gaps = 8/238 (3%)
 Frame = +3

Query: 207 WEDLPEDILVMIFSRLDQGRILFRTAYAVCRWWRSVA-------RLMAFQRGDGYLNFWL 365
           WEDL  DILV IF   D  ++    A+ VC  WR           L        ++   L
Sbjct: 22  WEDLDTDILVKIFQSFDIFQLTSGIAH-VCSSWRLACCDPLLWKTLDLSMLKSNFIKIPL 80

Query: 366 FHYISVDQTHQFIKLLDLIVDGWQNKSQ-SITRITFPNSLYLSEDHLYYLAQRLPNLQSL 542
             Y+ VD      K L  ++    N SQ +IT + F  +LY+S++ L Y A+R P L+ L
Sbjct: 81  EPYVYVDGRSD--KTLTRVLKISLNLSQGNITSLIFHFNLYVSDEQLTYTAERCPRLRRL 138

Query: 543 CLXXXXXXXXXXXXRAIRFWKEMRKLNIGPMKSSYYIPVIEELGINCRNLEFLVIHATHR 722
            L            +AIR W+++  L +  + +  Y+  IEE+  NCRN   L I     
Sbjct: 139 VLPAWNRIKKTGICKAIRMWRDLESLTMPSIANPPYL--IEEIANNCRNFSELKIMGP-- 194

Query: 723 EEIGDNALVIDEYASGKIANNLCKVKTLYFRNCMFNKMGLENLMNKCACIEEISVMCC 896
                     + + +  +A  L K++ L  R  M  K  L  +++    +E +++  C
Sbjct: 195 ---------FEIFFASTLAAYLPKLRVLSLRCSMLIKDALILILDSLQSLEVLNISHC 243


>gb|AFK44482.1| unknown [Medicago truncatula]
          Length = 305

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 54/174 (31%), Positives = 77/174 (44%), Gaps = 7/174 (4%)
 Frame = +3

Query: 207 WEDLPEDILVMIFSRLDQGRILFRTAYAVCRWWRSVA-------RLMAFQRGDGYLNFWL 365
           WEDL  DILV IF  LD   +    A+ VC  WR           L        ++   L
Sbjct: 11  WEDLDTDILVKIFQLLDIFELTSGIAH-VCSAWRMACCDPLLWKTLDLSMLRSNFIKIPL 69

Query: 366 FHYISVDQTHQFIKLLDLIVDGWQNKSQSITRITFPNSLYLSEDHLYYLAQRLPNLQSLC 545
             ++ VD+     KL  L+         SI  + F  +LY+S+D L Y A+R P+L+ L 
Sbjct: 70  EPFVYVDERSDK-KLTRLLKISLNLSRMSIVTLIFHFNLYVSDDQLTYTAERCPHLKRLV 128

Query: 546 LXXXXXXXXXXXXRAIRFWKEMRKLNIGPMKSSYYIPVIEELGINCRNLEFLVI 707
           L            +AIR WKE+  L +  + +  Y   +EE+  NC+N   L I
Sbjct: 129 LPAWNRIKRTGMCKAIRCWKELESLTMPSIANPPYF--LEEIATNCKNFSELKI 180


>gb|ACJ85472.1| unknown [Medicago truncatula]
          Length = 305

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 54/174 (31%), Positives = 77/174 (44%), Gaps = 7/174 (4%)
 Frame = +3

Query: 207 WEDLPEDILVMIFSRLDQGRILFRTAYAVCRWWRSVA-------RLMAFQRGDGYLNFWL 365
           WEDL  DILV IF  LD   +    A+ VC  WR           L        ++   L
Sbjct: 11  WEDLDTDILVKIFQLLDIFELTSGIAH-VCSAWRMTCCDPLLWKTLDLSMLRSNFIKIPL 69

Query: 366 FHYISVDQTHQFIKLLDLIVDGWQNKSQSITRITFPNSLYLSEDHLYYLAQRLPNLQSLC 545
             ++ VD+     KL  L+         SI  + F  +LY+S+D L Y A+R P+L+ L 
Sbjct: 70  EPFVYVDERSDK-KLTRLLKISLNLSRMSIVTLIFHFNLYVSDDQLTYTAERCPHLKRLV 128

Query: 546 LXXXXXXXXXXXXRAIRFWKEMRKLNIGPMKSSYYIPVIEELGINCRNLEFLVI 707
           L            +AIR WKE+  L +  + +  Y   +EE+  NC+N   L I
Sbjct: 129 LPAWNRIKRTGMCKAIRCWKELESLTMPSIANPPYF--LEEIATNCKNFSELKI 180


>emb|CBI31784.3| unnamed protein product [Vitis vinifera]
          Length = 310

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 8/175 (4%)
 Frame = +3

Query: 207 WEDLPEDILVMIFSRLDQGRILFRTAYAVCRWWRSVA-------RLMAFQRGDGYLNFWL 365
           WED+  DILV IF   D   +    A+ VCR WR  A        L   +    ++   L
Sbjct: 11  WEDMDIDILVKIFQSFDIFELTSGIAH-VCRVWRMAACDPFLWKTLDLTKLESHFIKIPL 69

Query: 366 FHYISVDQTHQFIKLLDLIVDGWQNKSQ-SITRITFPNSLYLSEDHLYYLAQRLPNLQSL 542
             Y+ V    Q  K L  ++    N SQ +I  + F  +LYL++D L Y+A+R P L+ L
Sbjct: 70  EPYVYVSD--QSDKSLTRLLKISLNLSQGNIRSLIFHFNLYLNDDQLTYIAERCPRLRRL 127

Query: 543 CLXXXXXXXXXXXXRAIRFWKEMRKLNIGPMKSSYYIPVIEELGINCRNLEFLVI 707
            L            +AIR WK++  L +  +++  Y+  +EE+  NC N   L I
Sbjct: 128 VLPAWNRIKKSGICKAIRMWKDLESLTMPSIENPPYL--MEEISKNCNNFRELKI 180


>ref|XP_002262912.1| PREDICTED: F-box/LRR-repeat protein At3g48880 [Vitis vinifera]
           gi|147841766|emb|CAN62210.1| hypothetical protein
           VITISV_008091 [Vitis vinifera]
          Length = 321

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 8/175 (4%)
 Frame = +3

Query: 207 WEDLPEDILVMIFSRLDQGRILFRTAYAVCRWWRSVA-------RLMAFQRGDGYLNFWL 365
           WED+  DILV IF   D   +    A+ VCR WR  A        L   +    ++   L
Sbjct: 22  WEDMDIDILVKIFQSFDIFELTSGIAH-VCRVWRMAACDPFLWKTLDLTKLESHFIKIPL 80

Query: 366 FHYISVDQTHQFIKLLDLIVDGWQNKSQ-SITRITFPNSLYLSEDHLYYLAQRLPNLQSL 542
             Y+ V    Q  K L  ++    N SQ +I  + F  +LYL++D L Y+A+R P L+ L
Sbjct: 81  EPYVYVSD--QSDKSLTRLLKISLNLSQGNIRSLIFHFNLYLNDDQLTYIAERCPRLRRL 138

Query: 543 CLXXXXXXXXXXXXRAIRFWKEMRKLNIGPMKSSYYIPVIEELGINCRNLEFLVI 707
            L            +AIR WK++  L +  +++  Y+  +EE+  NC N   L I
Sbjct: 139 VLPAWNRIKKSGICKAIRMWKDLESLTMPSIENPPYL--MEEISKNCNNFRELKI 191


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