BLASTX nr result

ID: Cimicifuga21_contig00021467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021467
         (1205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methylt...   449   e-124
emb|CBI22273.3| unnamed protein product [Vitis vinifera]              449   e-124
ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis] ...   440   e-121
ref|XP_004136796.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methylt...   424   e-116
ref|XP_002306029.1| predicted protein [Populus trichocarpa] gi|2...   401   e-109

>ref|XP_002278944.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like [Vitis
            vinifera]
          Length = 372

 Score =  449 bits (1155), Expect = e-124
 Identities = 245/385 (63%), Positives = 285/385 (74%), Gaps = 13/385 (3%)
 Frame = +1

Query: 7    MSVCKTLVRTPL----FSIXXXXXNXXXXXXXXXXXXXP---NLCFAALISPKRGLGFDS 165
            MS CKTLVR  +    FS+     N             P   +L FA+L+SP   +    
Sbjct: 4    MSACKTLVRISISSLEFSLVCNQRNFSFIPLPNHPSFSPISSSLRFASLLSPASSISLGL 63

Query: 166  SRN---SRTYGCVARAISNETTDTNLVETVTEDLILEEQPEDLNRDTVEELLSRREDDIA 336
            +R+   SR Y  VA ++  ETTD                 +D N+D VE LL+   DD+ 
Sbjct: 64   TRHKLHSRPYVHVAESVGVETTDLE---------------DDSNKDIVEHLLTNT-DDVG 107

Query: 337  RLMKMERRS---EFDKECSASGWFPYLNMFKAGSSFLSSSEILEALDPHILDTRKERMKK 507
            RLMKMERRS   +  +   +  WFPYL+ FK G++FLSSSEILEA+DP+I++ RKER + 
Sbjct: 108  RLMKMERRSMTGDGGELIQSKRWFPYLDKFKTGTTFLSSSEILEAMDPYIMEVRKERFRN 167

Query: 508  VVENRSYAVCLVVEGLTDFGNVSATCRSADALGFQSVHVVSSDSTKRYRNNRHVSMGAEK 687
            VV++RSY+VCLVVEGL DFGNVSA  RSADALGFQSVHVVS DS+KRY++NRHVSMGAEK
Sbjct: 168  VVKSRSYSVCLVVEGLCDFGNVSAAFRSADALGFQSVHVVSCDSSKRYKDNRHVSMGAEK 227

Query: 688  WLDIEIWKSTQECFKVLKSRGYRIATTHVGMDAVSIYDMDWSCPTAIVVGNESRGISNEA 867
            WLDIE+W STQECF+VLKSRGYRIATTHVGMDAVSIYDMDW+CPTAIVVGNE+RGIS+EA
Sbjct: 228  WLDIELWNSTQECFEVLKSRGYRIATTHVGMDAVSIYDMDWTCPTAIVVGNENRGISDEA 287

Query: 868  LELSDLHCSIPMNGMVDSFNVSVAAGILMHQAVCDRTSRLGRHGDLTLKERQILLAEFSL 1047
            LELSDLHCSIPM GMVDSFNVSVAAGILMH AVCDRTSRLG HGDL+L+E +ILLAEFSL
Sbjct: 288  LELSDLHCSIPMKGMVDSFNVSVAAGILMHHAVCDRTSRLGSHGDLSLEESRILLAEFSL 347

Query: 1048 RHSRSAISIAHEHAKRKTDRLVPKL 1122
            RHS+SA SIAHE AKRK    V KL
Sbjct: 348  RHSKSANSIAHEFAKRKAASPVSKL 372


>emb|CBI22273.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score =  449 bits (1155), Expect = e-124
 Identities = 245/385 (63%), Positives = 285/385 (74%), Gaps = 13/385 (3%)
 Frame = +1

Query: 7    MSVCKTLVRTPL----FSIXXXXXNXXXXXXXXXXXXXP---NLCFAALISPKRGLGFDS 165
            MS CKTLVR  +    FS+     N             P   +L FA+L+SP   +    
Sbjct: 1    MSACKTLVRISISSLEFSLVCNQRNFSFIPLPNHPSFSPISSSLRFASLLSPASSISLGL 60

Query: 166  SRN---SRTYGCVARAISNETTDTNLVETVTEDLILEEQPEDLNRDTVEELLSRREDDIA 336
            +R+   SR Y  VA ++  ETTD                 +D N+D VE LL+   DD+ 
Sbjct: 61   TRHKLHSRPYVHVAESVGVETTDLE---------------DDSNKDIVEHLLTNT-DDVG 104

Query: 337  RLMKMERRS---EFDKECSASGWFPYLNMFKAGSSFLSSSEILEALDPHILDTRKERMKK 507
            RLMKMERRS   +  +   +  WFPYL+ FK G++FLSSSEILEA+DP+I++ RKER + 
Sbjct: 105  RLMKMERRSMTGDGGELIQSKRWFPYLDKFKTGTTFLSSSEILEAMDPYIMEVRKERFRN 164

Query: 508  VVENRSYAVCLVVEGLTDFGNVSATCRSADALGFQSVHVVSSDSTKRYRNNRHVSMGAEK 687
            VV++RSY+VCLVVEGL DFGNVSA  RSADALGFQSVHVVS DS+KRY++NRHVSMGAEK
Sbjct: 165  VVKSRSYSVCLVVEGLCDFGNVSAAFRSADALGFQSVHVVSCDSSKRYKDNRHVSMGAEK 224

Query: 688  WLDIEIWKSTQECFKVLKSRGYRIATTHVGMDAVSIYDMDWSCPTAIVVGNESRGISNEA 867
            WLDIE+W STQECF+VLKSRGYRIATTHVGMDAVSIYDMDW+CPTAIVVGNE+RGIS+EA
Sbjct: 225  WLDIELWNSTQECFEVLKSRGYRIATTHVGMDAVSIYDMDWTCPTAIVVGNENRGISDEA 284

Query: 868  LELSDLHCSIPMNGMVDSFNVSVAAGILMHQAVCDRTSRLGRHGDLTLKERQILLAEFSL 1047
            LELSDLHCSIPM GMVDSFNVSVAAGILMH AVCDRTSRLG HGDL+L+E +ILLAEFSL
Sbjct: 285  LELSDLHCSIPMKGMVDSFNVSVAAGILMHHAVCDRTSRLGSHGDLSLEESRILLAEFSL 344

Query: 1048 RHSRSAISIAHEHAKRKTDRLVPKL 1122
            RHS+SA SIAHE AKRK    V KL
Sbjct: 345  RHSKSANSIAHEFAKRKAASPVSKL 369


>ref|XP_002532898.1| rRNA methylase, putative [Ricinus communis]
            gi|223527332|gb|EEF29478.1| rRNA methylase, putative
            [Ricinus communis]
          Length = 334

 Score =  440 bits (1131), Expect = e-121
 Identities = 222/285 (77%), Positives = 248/285 (87%)
 Frame = +1

Query: 268  EQPEDLNRDTVEELLSRREDDIARLMKMERRSEFDKECSASGWFPYLNMFKAGSSFLSSS 447
            E  +D   +TVE LLS R DD+ RLMKMERR + +K  S S WFPYL+ +K GS  LS S
Sbjct: 53   ESADDSKNETVEHLLSNR-DDVLRLMKMERRPDAEK--SGSRWFPYLDRYKCGSGELSGS 109

Query: 448  EILEALDPHILDTRKERMKKVVENRSYAVCLVVEGLTDFGNVSATCRSADALGFQSVHVV 627
            E+LEA+ P+I++ RKER   VV+NRSY+VCLVVEGL+DFGNVSA  RSADALGFQSVHVV
Sbjct: 110  EVLEAVGPYIMEDRKERFANVVKNRSYSVCLVVEGLSDFGNVSAAFRSADALGFQSVHVV 169

Query: 628  SSDSTKRYRNNRHVSMGAEKWLDIEIWKSTQECFKVLKSRGYRIATTHVGMDAVSIYDMD 807
            S DS+KRYR+NRHVSMGAEKWLDIE+W STQECF+VLKSRGYRIATTHVGMDAVSIYDMD
Sbjct: 170  SCDSSKRYRDNRHVSMGAEKWLDIELWDSTQECFEVLKSRGYRIATTHVGMDAVSIYDMD 229

Query: 808  WSCPTAIVVGNESRGISNEALELSDLHCSIPMNGMVDSFNVSVAAGILMHQAVCDRTSRL 987
            WSCPTAIVVGNE+RGIS+EALELSDLHCSIPM GMVDSFNVSVAAGILMHQAVCDRTSRL
Sbjct: 230  WSCPTAIVVGNENRGISDEALELSDLHCSIPMKGMVDSFNVSVAAGILMHQAVCDRTSRL 289

Query: 988  GRHGDLTLKERQILLAEFSLRHSRSAISIAHEHAKRKTDRLVPKL 1122
            G HGDLTL E ++LLAEFSLRHS+SAISIAHE+AKRK    +PKL
Sbjct: 290  GSHGDLTLAESRVLLAEFSLRHSKSAISIAHEYAKRKAATPMPKL 334


>ref|XP_004136796.1| PREDICTED: tRNA (guanosine(18)-2'-O)-methyltransferase-like [Cucumis
            sativus]
          Length = 370

 Score =  424 bits (1091), Expect = e-116
 Identities = 222/287 (77%), Positives = 247/287 (86%), Gaps = 4/287 (1%)
 Frame = +1

Query: 250  EDLILE-EQPEDLNRDTVEELLSRREDDIARLMKMERRS-EFD-KECSASG-WFPYLNMF 417
            ED++ + E PE   +DTVE LL+   +D+ARLMKMERRS E D  E    G WFPYL+ +
Sbjct: 74   EDIVADVEPPEVRTQDTVEHLLTH-SNDVARLMKMERRSVELDGAEYPHKGRWFPYLDKY 132

Query: 418  KAGSSFLSSSEILEALDPHILDTRKERMKKVVENRSYAVCLVVEGLTDFGNVSATCRSAD 597
              GSS+L+S EILEALD  ILD+RKER K VV NRSY+VCLVVEGLTDFGNVSA  RSAD
Sbjct: 133  SCGSSWLNSGEILEALDSLILDSRKERFKNVVRNRSYSVCLVVEGLTDFGNVSAAFRSAD 192

Query: 598  ALGFQSVHVVSSDSTKRYRNNRHVSMGAEKWLDIEIWKSTQECFKVLKSRGYRIATTHVG 777
            ALGFQSVHVVS D++KRYR NRHVSMGAEKWLDIE+W ST ECFK+LKSRGYRI +TH+G
Sbjct: 193  ALGFQSVHVVSCDASKRYRENRHVSMGAEKWLDIELWNSTPECFKILKSRGYRIVSTHLG 252

Query: 778  MDAVSIYDMDWSCPTAIVVGNESRGISNEALELSDLHCSIPMNGMVDSFNVSVAAGILMH 957
             +AVS+YDMDWSCPTAIVVGNESRGISNEALELSDLHCSIPMNGMVDSFNVSVAAGILMH
Sbjct: 253  ANAVSVYDMDWSCPTAIVVGNESRGISNEALELSDLHCSIPMNGMVDSFNVSVAAGILMH 312

Query: 958  QAVCDRTSRLGRHGDLTLKERQILLAEFSLRHSRSAISIAHEHAKRK 1098
             AVC+RTSRLG HGDLT +ERQILLAEFSLRHS+SAISIA+E AKRK
Sbjct: 313  HAVCNRTSRLGCHGDLTSEERQILLAEFSLRHSKSAISIANELAKRK 359


>ref|XP_002306029.1| predicted protein [Populus trichocarpa] gi|222848993|gb|EEE86540.1|
            predicted protein [Populus trichocarpa]
          Length = 269

 Score =  401 bits (1031), Expect = e-109
 Identities = 199/268 (74%), Positives = 228/268 (85%), Gaps = 2/268 (0%)
 Frame = +1

Query: 325  DDIARLMKMERR--SEFDKECSASGWFPYLNMFKAGSSFLSSSEILEALDPHILDTRKER 498
            DD+ RLMKMERR     D     S WFPY + FK     LSSSE+LEA+ P++++ RKER
Sbjct: 2    DDVLRLMKMERRITKTHDDTVLGSHWFPYFDRFKCEGVDLSSSEVLEAVGPYMMEERKER 61

Query: 499  MKKVVENRSYAVCLVVEGLTDFGNVSATCRSADALGFQSVHVVSSDSTKRYRNNRHVSMG 678
            ++  V++RSY++CLVVEGLTDFGNVSA  RSADALGFQSVHV+S DS+KRY+ NRHVSMG
Sbjct: 62   IRNTVKSRSYSLCLVVEGLTDFGNVSAVFRSADALGFQSVHVISCDSSKRYKENRHVSMG 121

Query: 679  AEKWLDIEIWKSTQECFKVLKSRGYRIATTHVGMDAVSIYDMDWSCPTAIVVGNESRGIS 858
            AEKWLDIE+W S ++CF+VLKSRGYRIATTHVG+DAVSIYDMDWSCPTAIVVGNE+RGIS
Sbjct: 122  AEKWLDIELWDSAKDCFQVLKSRGYRIATTHVGIDAVSIYDMDWSCPTAIVVGNENRGIS 181

Query: 859  NEALELSDLHCSIPMNGMVDSFNVSVAAGILMHQAVCDRTSRLGRHGDLTLKERQILLAE 1038
            +EALELSDLHCSIPM GMVDSFNVSVAAGILMH AVCDRTSRLG HGDLT +E QILLAE
Sbjct: 182  DEALELSDLHCSIPMKGMVDSFNVSVAAGILMHHAVCDRTSRLGSHGDLTPEETQILLAE 241

Query: 1039 FSLRHSRSAISIAHEHAKRKTDRLVPKL 1122
            FSLRHS++ ISIAH++AKRK     PKL
Sbjct: 242  FSLRHSKNMISIAHDYAKRKAATPKPKL 269


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