BLASTX nr result

ID: Cimicifuga21_contig00021459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021459
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542846.1| PREDICTED: structural maintenance of chromos...   363   2e-98
ref|XP_002326795.1| condensin complex components subunit [Populu...   363   3e-98
ref|XP_003540523.1| PREDICTED: structural maintenance of chromos...   362   7e-98
ref|XP_002304405.1| condensin complex components subunit [Populu...   361   1e-97
emb|CBI24628.3| unnamed protein product [Vitis vinifera]              359   4e-97

>ref|XP_003542846.1| PREDICTED: structural maintenance of chromosomes protein 2-1-like
            [Glycine max]
          Length = 1176

 Score =  363 bits (932), Expect = 2e-98
 Identities = 185/207 (89%), Positives = 192/207 (92%)
 Frame = +1

Query: 1    LEKLQAEQSDLEKRVNKKVMAMFEKAEDEYNELISKKNIIENDKSKIRKVIEELDEKKKE 180
            LEKLQAEQS LEKRVNKKVMAMFEKAEDEYN+L+SKK IIENDKSKI+KVIEELDEKKKE
Sbjct: 967  LEKLQAEQSGLEKRVNKKVMAMFEKAEDEYNDLMSKKYIIENDKSKIKKVIEELDEKKKE 1026

Query: 181  TLNVTWVKVNSDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGG 360
            TLNVTW+KVN+DFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGG
Sbjct: 1027 TLNVTWIKVNNDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGG 1086

Query: 361  QRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIVVSLKEG 540
            QR             FKPAPLYILDEVDAALDLSHTQNIGRMIK+HFPHSQFIVVSLKEG
Sbjct: 1087 QRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEG 1146

Query: 541  MFNNANVLFRTKFVDGVSTVQRTVASK 621
            MFNNANVLFRTKFVDGVSTVQRTVA+K
Sbjct: 1147 MFNNANVLFRTKFVDGVSTVQRTVAAK 1173


>ref|XP_002326795.1| condensin complex components subunit [Populus trichocarpa]
            gi|222834117|gb|EEE72594.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1176

 Score =  363 bits (931), Expect = 3e-98
 Identities = 184/207 (88%), Positives = 192/207 (92%)
 Frame = +1

Query: 1    LEKLQAEQSDLEKRVNKKVMAMFEKAEDEYNELISKKNIIENDKSKIRKVIEELDEKKKE 180
            LE+LQAEQS LEKRVNKKVMAMFEKAEDEYN+L+SKKNIIENDKSKI+KVIEELDEKKKE
Sbjct: 967  LERLQAEQSGLEKRVNKKVMAMFEKAEDEYNDLMSKKNIIENDKSKIKKVIEELDEKKKE 1026

Query: 181  TLNVTWVKVNSDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGG 360
            TL VTWVKVN+DFGS+FSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGG
Sbjct: 1027 TLKVTWVKVNNDFGSVFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGG 1086

Query: 361  QRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIVVSLKEG 540
            QR             FKPAPLYILDEVDAALDLSHTQNIGRMIK+HFPHSQFIVVSLKEG
Sbjct: 1087 QRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEG 1146

Query: 541  MFNNANVLFRTKFVDGVSTVQRTVASK 621
            MFNNANVLFRTKFVDGVSTVQRTVA+K
Sbjct: 1147 MFNNANVLFRTKFVDGVSTVQRTVAAK 1173


>ref|XP_003540523.1| PREDICTED: structural maintenance of chromosomes protein 2-1-like
            [Glycine max]
          Length = 1176

 Score =  362 bits (928), Expect = 7e-98
 Identities = 184/207 (88%), Positives = 191/207 (92%)
 Frame = +1

Query: 1    LEKLQAEQSDLEKRVNKKVMAMFEKAEDEYNELISKKNIIENDKSKIRKVIEELDEKKKE 180
            LEKLQAEQS LEKRVNKKVMAMFEKAEDEYN+L+SKKNIIENDKSKI+ VIEELDEKKKE
Sbjct: 967  LEKLQAEQSGLEKRVNKKVMAMFEKAEDEYNDLMSKKNIIENDKSKIKMVIEELDEKKKE 1026

Query: 181  TLNVTWVKVNSDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGG 360
            TLNVTW+KVN+DFGSIFS LLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGG
Sbjct: 1027 TLNVTWIKVNNDFGSIFSMLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGG 1086

Query: 361  QRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIVVSLKEG 540
            QR             FKPAPLYILDEVDAALDLSHTQNIGRMIK+HFPHSQFIVVSLKEG
Sbjct: 1087 QRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEG 1146

Query: 541  MFNNANVLFRTKFVDGVSTVQRTVASK 621
            MFNNANVLFRTKFVDGVSTVQRTVA+K
Sbjct: 1147 MFNNANVLFRTKFVDGVSTVQRTVAAK 1173


>ref|XP_002304405.1| condensin complex components subunit [Populus trichocarpa]
            gi|222841837|gb|EEE79384.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1176

 Score =  361 bits (926), Expect = 1e-97
 Identities = 184/207 (88%), Positives = 190/207 (91%)
 Frame = +1

Query: 1    LEKLQAEQSDLEKRVNKKVMAMFEKAEDEYNELISKKNIIENDKSKIRKVIEELDEKKKE 180
            L+KLQAEQS LEKRVNKKVMAMFEKAEDEYN+L+SKKNIIENDKSKI KVIEELDEKKKE
Sbjct: 967  LDKLQAEQSGLEKRVNKKVMAMFEKAEDEYNDLMSKKNIIENDKSKINKVIEELDEKKKE 1026

Query: 181  TLNVTWVKVNSDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGG 360
            TL VTWVKVN+DFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFG VWKQSLSELSGG
Sbjct: 1027 TLKVTWVKVNNDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGGVWKQSLSELSGG 1086

Query: 361  QRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIVVSLKEG 540
            QR             FKPAPLYILDEVDAALDLSHTQNIGRMIK+HFPHSQFIVVSLKEG
Sbjct: 1087 QRSLLALSIILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKTHFPHSQFIVVSLKEG 1146

Query: 541  MFNNANVLFRTKFVDGVSTVQRTVASK 621
            MFNNANVLFRTKFVDGVSTVQRTVA+K
Sbjct: 1147 MFNNANVLFRTKFVDGVSTVQRTVAAK 1173


>emb|CBI24628.3| unnamed protein product [Vitis vinifera]
          Length = 1171

 Score =  359 bits (921), Expect = 4e-97
 Identities = 184/207 (88%), Positives = 188/207 (90%)
 Frame = +1

Query: 1    LEKLQAEQSDLEKRVNKKVMAMFEKAEDEYNELISKKNIIENDKSKIRKVIEELDEKKKE 180
            L+KLQ EQS LEKRVNKKVMAMFEKAEDEYNELISKK+IIENDKSKI+ VIEELDEKKKE
Sbjct: 962  LDKLQTEQSGLEKRVNKKVMAMFEKAEDEYNELISKKSIIENDKSKIKMVIEELDEKKKE 1021

Query: 181  TLNVTWVKVNSDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGG 360
            TL VTW KVN DFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGG
Sbjct: 1022 TLKVTWTKVNKDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGG 1081

Query: 361  QRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIVVSLKEG 540
            QR             FKPAPLYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIVVSLKEG
Sbjct: 1082 QRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIVVSLKEG 1141

Query: 541  MFNNANVLFRTKFVDGVSTVQRTVASK 621
            MFNNANVLFRTKFVDGVSTVQRTVA+K
Sbjct: 1142 MFNNANVLFRTKFVDGVSTVQRTVAAK 1168


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