BLASTX nr result

ID: Cimicifuga21_contig00021442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021442
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303106.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002869484.1| hypothetical protein ARALYDRAFT_328829 [Arab...    69   7e-10
gb|ABR17988.1| unknown [Picea sitchensis]                              67   2e-09
ref|NP_194598.1| uncharacterized protein [Arabidopsis thaliana] ...    67   3e-09
emb|CAA22983.1| hypothetical protein [Arabidopsis thaliana] gi|7...    67   3e-09

>ref|XP_002303106.1| predicted protein [Populus trichocarpa] gi|222844832|gb|EEE82379.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 26/53 (49%), Positives = 40/53 (75%)
 Frame = -1

Query: 573 HCYVCDTRAPCIYWGTGASSGDHCRSSDKEEVWREKRKCFRQRDQDEIPLAEL 415
           HCYVCD+ APC++WGTG S+ DHC ++DK+E W+ +RK +R      +P+++L
Sbjct: 211 HCYVCDSLAPCVHWGTGVSTIDHCHATDKQETWKNQRKIYRTGKDAPVPVSKL 263


>ref|XP_002869484.1| hypothetical protein ARALYDRAFT_328829 [Arabidopsis lyrata subsp.
           lyrata] gi|297315320|gb|EFH45743.1| hypothetical protein
           ARALYDRAFT_328829 [Arabidopsis lyrata subsp. lyrata]
          Length = 437

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
 Frame = -1

Query: 573 HCYVCDTRAPCIYWGTGASSG-DHCRSSDKEEVWREKRKCFRQRDQDEIPLAE 418
           HCYVCDTRAPC YW +G  S  DHC ++DKE+ W+ +R+C R R+    P+++
Sbjct: 117 HCYVCDTRAPCPYWFSGGISNIDHCHANDKEQTWKNQRECIRTRNMLPRPVSK 169


>gb|ABR17988.1| unknown [Picea sitchensis]
          Length = 607

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
 Frame = -1

Query: 573 HCYVCDTRAPCIYWGTGASSGDHCRSSDKEEVWREKRKCFRQRDQDEIPL-----AELML 409
           HCYVCD  APC+ WG G +S DHC SSDKEE W + R  ++ R    + +     A   L
Sbjct: 134 HCYVCDKLAPCLLWGKGNASNDHCHSSDKEEKWTKLRNFYKMRKAPSMAIPNSFNAIFSL 193

Query: 408 LKRKEGVTLNHSSTQQREAIRRIKSKVN 325
             R   V ++ S+     A+  + S +N
Sbjct: 194 ATRGSSVPVSRSNQGGTGALLPVHSNLN 221


>ref|NP_194598.1| uncharacterized protein [Arabidopsis thaliana]
           gi|115311409|gb|ABI93885.1| At4g28690 [Arabidopsis
           thaliana] gi|332660126|gb|AEE85526.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 448

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
 Frame = -1

Query: 573 HCYVCDTRAPCIYWGTGA-SSGDHCRSSDKEEVWREKRKCFR 451
           HCYVCDTRAPC YW +G  S+ DHC ++DKE+ W ++R+C R
Sbjct: 120 HCYVCDTRAPCTYWFSGGISNTDHCHANDKEKTWNDQRECIR 161


>emb|CAA22983.1| hypothetical protein [Arabidopsis thaliana]
           gi|7269724|emb|CAB81457.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 419

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
 Frame = -1

Query: 573 HCYVCDTRAPCIYWGTGA-SSGDHCRSSDKEEVWREKRKCFR 451
           HCYVCDTRAPC YW +G  S+ DHC ++DKE+ W ++R+C R
Sbjct: 91  HCYVCDTRAPCTYWFSGGISNTDHCHANDKEKTWNDQRECIR 132


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