BLASTX nr result

ID: Cimicifuga21_contig00021430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021430
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301875.1| predicted protein [Populus trichocarpa] gi|2...   154   7e-36
ref|XP_002333972.1| predicted protein [Populus trichocarpa] gi|2...   154   7e-36
ref|XP_002510369.1| conserved hypothetical protein [Ricinus comm...   146   1e-33
ref|XP_003545282.1| PREDICTED: uncharacterized protein LOC100805...   145   3e-33
dbj|BAC83483.1| unknown protein [Oryza sativa Japonica Group] gi...   144   6e-33

>ref|XP_002301875.1| predicted protein [Populus trichocarpa] gi|222843601|gb|EEE81148.1|
            predicted protein [Populus trichocarpa]
          Length = 1846

 Score =  154 bits (389), Expect = 7e-36
 Identities = 77/138 (55%), Positives = 94/138 (68%)
 Frame = +3

Query: 9    QKQEALSTLPSDPNLGDFVHWKDDPANRLPPPAWSTDSGKLCKPTSLRDIQKEQEQKTLS 188
            Q++E L  +PS P+LGDFV WK +PAN  P PAWS DS KL KPTSLRDIQKEQE+K  S
Sbjct: 1496 QEKEVLPAIPSGPSLGDFVFWKGEPANHSPSPAWSADSKKLPKPTSLRDIQKEQEKKVSS 1555

Query: 189  TQQTAPMPTPKKIHSNRETRGSGPTQTLTGSSPSKVASPIQINARTSVQSKSGVEDDLFW 368
             Q    +P P+K    +   GSG + + + SSPSK ASPIQIN+R S QSK   +D+LFW
Sbjct: 1556 AQPQNQIPIPQKPQPAQSAHGSGSSWSHSASSPSKAASPIQINSRASSQSKYKGDDELFW 1615

Query: 369  GPLDQSNDEVIQPGFPSL 422
            GP+DQS  E  Q  FP +
Sbjct: 1616 GPIDQSKQEPKQSEFPHI 1633


>ref|XP_002333972.1| predicted protein [Populus trichocarpa] gi|222839392|gb|EEE77729.1|
           predicted protein [Populus trichocarpa]
          Length = 885

 Score =  154 bits (389), Expect = 7e-36
 Identities = 77/138 (55%), Positives = 94/138 (68%)
 Frame = +3

Query: 9   QKQEALSTLPSDPNLGDFVHWKDDPANRLPPPAWSTDSGKLCKPTSLRDIQKEQEQKTLS 188
           Q++E L  +PS P+LGDFV WK +PAN  P PAWS DS KL KPTSLRDIQKEQE+K  S
Sbjct: 546 QEKEVLPAIPSGPSLGDFVFWKGEPANHSPSPAWSADSKKLPKPTSLRDIQKEQEKKVSS 605

Query: 189 TQQTAPMPTPKKIHSNRETRGSGPTQTLTGSSPSKVASPIQINARTSVQSKSGVEDDLFW 368
            Q    +P P+K    +   GSG + + + SSPSK ASPIQIN+R S QSK   +D+LFW
Sbjct: 606 AQPQNQIPIPQKPQPAQSAHGSGSSWSHSASSPSKAASPIQINSRASSQSKYKGDDELFW 665

Query: 369 GPLDQSNDEVIQPGFPSL 422
           GP+DQS  E  Q  FP +
Sbjct: 666 GPIDQSKQEPKQSEFPHI 683


>ref|XP_002510369.1| conserved hypothetical protein [Ricinus communis]
            gi|223551070|gb|EEF52556.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1798

 Score =  146 bits (369), Expect = 1e-33
 Identities = 75/140 (53%), Positives = 97/140 (69%), Gaps = 1/140 (0%)
 Frame = +3

Query: 12   KQEALSTLPSDPNLGDFVHWKD-DPANRLPPPAWSTDSGKLCKPTSLRDIQKEQEQKTLS 188
            ++E L T+PS P+LGDFV WK  +     P PAWST+S KL KPTSLRDIQKEQE+K  S
Sbjct: 1454 EKEVLPTIPSGPSLGDFVFWKGGESTTPSPSPAWSTESKKLPKPTSLRDIQKEQEKKFSS 1513

Query: 189  TQQTAPMPTPKKIHSNRETRGSGPTQTLTGSSPSKVASPIQINARTSVQSKSGVEDDLFW 368
             Q   P+ TP+K   ++    SG + +L+ SSPSK ASP+QIN+ +++QSK   +DDLFW
Sbjct: 1514 VQPQNPISTPQKPQPSQVAHASGASWSLSASSPSKAASPMQINSHSALQSKYKGDDDLFW 1573

Query: 369  GPLDQSNDEVIQPGFPSLVN 428
            GP+DQS  E  Q  FP LV+
Sbjct: 1574 GPVDQSKQETKQSEFPHLVS 1593


>ref|XP_003545282.1| PREDICTED: uncharacterized protein LOC100805646 [Glycine max]
          Length = 1886

 Score =  145 bits (366), Expect = 3e-33
 Identities = 75/144 (52%), Positives = 99/144 (68%), Gaps = 2/144 (1%)
 Frame = +3

Query: 3    SHQKQEALSTLPSDPNLGDFVHWKDD--PANRLPPPAWSTDSGKLCKPTSLRDIQKEQEQ 176
            + Q++E L  +P+ P+LGDFV WK +  P    P PAWSTDSG++ KPTSLRDI KEQE+
Sbjct: 1544 AQQEKEELPAIPAGPSLGDFVLWKGEREPPIPSPSPAWSTDSGRVPKPTSLRDILKEQER 1603

Query: 177  KTLSTQQTAPMPTPKKIHSNRETRGSGPTQTLTGSSPSKVASPIQINARTSVQSKSGVED 356
            K  S    +PMP P+K    + T  S  +++++ SSPSK ASPIQIN++ S QSK   +D
Sbjct: 1604 KGSSAIPVSPMPPPQKSQPPQSTWSSASSRSISASSPSKAASPIQINSQAS-QSKHKGDD 1662

Query: 357  DLFWGPLDQSNDEVIQPGFPSLVN 428
            DLFWGP+DQS  +  Q GFP LV+
Sbjct: 1663 DLFWGPMDQSKQDTKQSGFPQLVS 1686


>dbj|BAC83483.1| unknown protein [Oryza sativa Japonica Group]
            gi|218199060|gb|EEC81487.1| hypothetical protein
            OsI_24825 [Oryza sativa Indica Group]
            gi|222636403|gb|EEE66535.1| hypothetical protein
            OsJ_23024 [Oryza sativa Japonica Group]
          Length = 1739

 Score =  144 bits (364), Expect = 6e-33
 Identities = 66/140 (47%), Positives = 94/140 (67%)
 Frame = +3

Query: 3    SHQKQEALSTLPSDPNLGDFVHWKDDPANRLPPPAWSTDSGKLCKPTSLRDIQKEQEQKT 182
            SHQ++E L   PS P+ GDFV WK D A+ +P PAWS++S K+ +P SLRDIQ+EQE+++
Sbjct: 1411 SHQEKEILPAPPSGPSFGDFVPWKSDQASAVPAPAWSSESAKVQRPLSLRDIQREQERRS 1470

Query: 183  LSTQQTAPMPTPKKIHSNRETRGSGPTQTLTGSSPSKVASPIQINARTSVQSKSGVEDDL 362
               QQ  P PTP K+  N+    + P+   +GSSPSK  +P+Q+++  S +SKS  EDDL
Sbjct: 1471 AVAQQQPPSPTPAKVSINQRNHANVPSWQASGSSPSKAVAPVQMSSNASSRSKSNAEDDL 1530

Query: 363  FWGPLDQSNDEVIQPGFPSL 422
            FWGP + +  +  Q  FP+L
Sbjct: 1531 FWGPSEHAKQDKKQSEFPTL 1550


Top