BLASTX nr result
ID: Cimicifuga21_contig00021423
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00021423 (438 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI32919.3| unnamed protein product [Vitis vinifera] 71 8e-11 dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare] 69 4e-10 ref|XP_003529796.1| PREDICTED: putative F-box/FBD/LRR-repeat pro... 67 2e-09 emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] 67 2e-09 ref|XP_002300080.1| f-box family protein [Populus trichocarpa] g... 66 3e-09 >emb|CBI32919.3| unnamed protein product [Vitis vinifera] Length = 411 Score = 71.2 bits (173), Expect = 8e-11 Identities = 38/107 (35%), Positives = 59/107 (55%) Frame = +3 Query: 117 KDRLSNLPEPLLHHVLSFIDMKYVVQTSMLSRKWRYIWTSLPFLSFDTDVFQDSLKTYSP 296 +DR+SNLP+ +L H++SF+ K+ V TS+LS++WRY+W S+P L FD D+ D K Sbjct: 9 RDRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKPIGD 68 Query: 297 NFRYSXXXXXXXXXXXXRDNTTIQTFSLIWDDELCNSSRIDSWIRVA 437 + R + I+ F L D +S+ ++SWI A Sbjct: 69 SERSICFKNFVDKVLLHGSISCIRKFRLKCSDHELDSA-VNSWICTA 114 >dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 384 Score = 68.9 bits (167), Expect = 4e-10 Identities = 30/55 (54%), Positives = 40/55 (72%) Frame = +3 Query: 120 DRLSNLPEPLLHHVLSFIDMKYVVQTSMLSRKWRYIWTSLPFLSFDTDVFQDSLK 284 DRLS+LP+ LLHHV+SF+ M VV+TS+LS +WR++W S PF+ D F D K Sbjct: 22 DRLSSLPDDLLHHVMSFLPMPEVVRTSLLSPRWRFVWRSTPFIRIDGAEFMDKSK 76 >ref|XP_003529796.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like [Glycine max] Length = 449 Score = 66.6 bits (161), Expect = 2e-09 Identities = 26/51 (50%), Positives = 41/51 (80%) Frame = +3 Query: 117 KDRLSNLPEPLLHHVLSFIDMKYVVQTSMLSRKWRYIWTSLPFLSFDTDVF 269 +DRLS++P+ L+HH+LSF++ K +QT +LS++WRY+W S+P LSF + F Sbjct: 55 QDRLSDMPDCLIHHILSFMETKDAIQTCVLSKRWRYLWASVPCLSFSSKSF 105 >emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] Length = 607 Score = 66.6 bits (161), Expect = 2e-09 Identities = 36/107 (33%), Positives = 57/107 (53%) Frame = +3 Query: 117 KDRLSNLPEPLLHHVLSFIDMKYVVQTSMLSRKWRYIWTSLPFLSFDTDVFQDSLKTYSP 296 +D +SNLP+ LL H+LSF+ K+ V TS+LS++WRY+W S+P L FD +++ + Sbjct: 9 RDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVEL 68 Query: 297 NFRYSXXXXXXXXXXXXRDNTTIQTFSLIWDDELCNSSRIDSWIRVA 437 R + + I+ F L + D N + SWI +A Sbjct: 69 EERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDN--NLDSVYSWICIA 113 >ref|XP_002300080.1| f-box family protein [Populus trichocarpa] gi|222847338|gb|EEE84885.1| f-box family protein [Populus trichocarpa] Length = 351 Score = 66.2 bits (160), Expect = 3e-09 Identities = 27/52 (51%), Positives = 41/52 (78%) Frame = +3 Query: 117 KDRLSNLPEPLLHHVLSFIDMKYVVQTSMLSRKWRYIWTSLPFLSFDTDVFQ 272 +DRLSNLP ++HH+LSF+D KY VQTS+L++ WR +WTS+ L +++ F+ Sbjct: 14 EDRLSNLPNHIIHHILSFLDAKYAVQTSVLAKGWRNLWTSVHVLHLNSNSFR 65