BLASTX nr result

ID: Cimicifuga21_contig00021423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021423
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32919.3| unnamed protein product [Vitis vinifera]               71   8e-11
dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare]     69   4e-10
ref|XP_003529796.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    67   2e-09
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    67   2e-09
ref|XP_002300080.1| f-box family protein [Populus trichocarpa] g...    66   3e-09

>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/107 (35%), Positives = 59/107 (55%)
 Frame = +3

Query: 117 KDRLSNLPEPLLHHVLSFIDMKYVVQTSMLSRKWRYIWTSLPFLSFDTDVFQDSLKTYSP 296
           +DR+SNLP+ +L H++SF+  K+ V TS+LS++WRY+W S+P L FD D+  D  K    
Sbjct: 9   RDRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKPIGD 68

Query: 297 NFRYSXXXXXXXXXXXXRDNTTIQTFSLIWDDELCNSSRIDSWIRVA 437
           + R                 + I+ F L   D   +S+ ++SWI  A
Sbjct: 69  SERSICFKNFVDKVLLHGSISCIRKFRLKCSDHELDSA-VNSWICTA 114


>dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 384

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/55 (54%), Positives = 40/55 (72%)
 Frame = +3

Query: 120 DRLSNLPEPLLHHVLSFIDMKYVVQTSMLSRKWRYIWTSLPFLSFDTDVFQDSLK 284
           DRLS+LP+ LLHHV+SF+ M  VV+TS+LS +WR++W S PF+  D   F D  K
Sbjct: 22  DRLSSLPDDLLHHVMSFLPMPEVVRTSLLSPRWRFVWRSTPFIRIDGAEFMDKSK 76


>ref|XP_003529796.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Glycine max]
          Length = 449

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 26/51 (50%), Positives = 41/51 (80%)
 Frame = +3

Query: 117 KDRLSNLPEPLLHHVLSFIDMKYVVQTSMLSRKWRYIWTSLPFLSFDTDVF 269
           +DRLS++P+ L+HH+LSF++ K  +QT +LS++WRY+W S+P LSF +  F
Sbjct: 55  QDRLSDMPDCLIHHILSFMETKDAIQTCVLSKRWRYLWASVPCLSFSSKSF 105


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/107 (33%), Positives = 57/107 (53%)
 Frame = +3

Query: 117 KDRLSNLPEPLLHHVLSFIDMKYVVQTSMLSRKWRYIWTSLPFLSFDTDVFQDSLKTYSP 296
           +D +SNLP+ LL H+LSF+  K+ V TS+LS++WRY+W S+P L FD +++ +       
Sbjct: 9   RDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVEL 68

Query: 297 NFRYSXXXXXXXXXXXXRDNTTIQTFSLIWDDELCNSSRIDSWIRVA 437
             R               + + I+ F L + D   N   + SWI +A
Sbjct: 69  EERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDN--NLDSVYSWICIA 113


>ref|XP_002300080.1| f-box family protein [Populus trichocarpa]
           gi|222847338|gb|EEE84885.1| f-box family protein
           [Populus trichocarpa]
          Length = 351

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 27/52 (51%), Positives = 41/52 (78%)
 Frame = +3

Query: 117 KDRLSNLPEPLLHHVLSFIDMKYVVQTSMLSRKWRYIWTSLPFLSFDTDVFQ 272
           +DRLSNLP  ++HH+LSF+D KY VQTS+L++ WR +WTS+  L  +++ F+
Sbjct: 14  EDRLSNLPNHIIHHILSFLDAKYAVQTSVLAKGWRNLWTSVHVLHLNSNSFR 65


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