BLASTX nr result

ID: Cimicifuga21_contig00021367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021367
         (1106 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_564388.1| putative membrane protein [Arabidopsis thaliana...   462   e-128
gb|AAM65181.1| unknown [Arabidopsis thaliana]                         462   e-128
emb|CBI31242.3| unnamed protein product [Vitis vinifera]              461   e-127
ref|XP_002277191.1| PREDICTED: uncharacterized protein LOC100250...   461   e-127
ref|XP_002304362.1| predicted protein [Populus trichocarpa] gi|2...   461   e-127

>ref|NP_564388.1| putative membrane protein [Arabidopsis thaliana]
            gi|10801363|gb|AAG23435.1|AC084165_1 unknown protein
            [Arabidopsis thaliana]
            gi|12321470|gb|AAG50795.1|AC074309_12 unknown protein
            [Arabidopsis thaliana] gi|14532512|gb|AAK63984.1|
            At1g32080/F3C3_12 [Arabidopsis thaliana]
            gi|20855884|gb|AAM26636.1| At1g32080/F3C3_12 [Arabidopsis
            thaliana] gi|332193313|gb|AEE31434.1| putative membrane
            protein [Arabidopsis thaliana]
          Length = 512

 Score =  462 bits (1190), Expect = e-128
 Identities = 240/309 (77%), Positives = 262/309 (84%)
 Frame = +3

Query: 3    SLAVAGYTAIAVRKMVKTEMVPAEPMTKPSPFSGIEVWSWTGVFVISFATALLNPTALGT 182
            SL VAGYTAIAVRKMVKTEM  AEPM KPSPFS +E+WSW+G+FV+SF  AL  P +LGT
Sbjct: 204  SLCVAGYTAIAVRKMVKTEMTEAEPMAKPSPFSTLELWSWSGIFVVSFVGALFYPNSLGT 263

Query: 183  SASTCLPFLLAATVLGYMVGSGLPSNAKKVLHPIISCXXXXXXXXXXFGYFSRSGVDAVL 362
            SA T LPFLL++TVLGY+VGSGLPS+ KKV HPII C          FGY S SG+D VL
Sbjct: 264  SARTSLPFLLSSTVLGYIVGSGLPSSIKKVFHPIICCALSAVLAALAFGYASGSGLDPVL 323

Query: 363  GDYLTKVSSNPGAGDILMGFLGSVIISFAFSMFKQRKLVKRHAAEIFSSVIISTLFSLYS 542
            G+YLTKV+S+PGAGDILMGFLGSVI+SFAFSMFKQRKLVKRHAAEIF+SVI+ST+FSLYS
Sbjct: 324  GNYLTKVASDPGAGDILMGFLGSVILSFAFSMFKQRKLVKRHAAEIFTSVIVSTVFSLYS 383

Query: 543  TALVGRLVGLEPALTVSILPRCITVALALSIVSFFEGTNPSXXXXXXXXXXXXXXNFVQT 722
            TALVGRLVGLEP+LTVSILPRCITVALALSIVS FEGTN S              NFVQ 
Sbjct: 384  TALVGRLVGLEPSLTVSILPRCITVALALSIVSLFEGTNSSLTAAVVVVTGLIGANFVQV 443

Query: 723  MLDKLRLQDPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLLCSVPMV 902
            +LDKLRL+DPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLLCSVP V
Sbjct: 444  VLDKLRLRDPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLLCSVPAV 503

Query: 903  RQSLLLIVG 929
            RQSLL +VG
Sbjct: 504  RQSLLAVVG 512


>gb|AAM65181.1| unknown [Arabidopsis thaliana]
          Length = 512

 Score =  462 bits (1190), Expect = e-128
 Identities = 240/309 (77%), Positives = 262/309 (84%)
 Frame = +3

Query: 3    SLAVAGYTAIAVRKMVKTEMVPAEPMTKPSPFSGIEVWSWTGVFVISFATALLNPTALGT 182
            SL VAGYTAIAVRKMVKTEM  AEPM KPSPFS +E+WSW+G+FV+SF  AL  P +LGT
Sbjct: 204  SLCVAGYTAIAVRKMVKTEMTEAEPMAKPSPFSTLELWSWSGIFVVSFVGALFYPNSLGT 263

Query: 183  SASTCLPFLLAATVLGYMVGSGLPSNAKKVLHPIISCXXXXXXXXXXFGYFSRSGVDAVL 362
            SA T LPFLL++TVLGY+VGSGLPS+ KKV HPII C          FGY S SG+D VL
Sbjct: 264  SARTSLPFLLSSTVLGYIVGSGLPSSIKKVFHPIICCALSAVLAALAFGYASGSGLDPVL 323

Query: 363  GDYLTKVSSNPGAGDILMGFLGSVIISFAFSMFKQRKLVKRHAAEIFSSVIISTLFSLYS 542
            G+YLTKV+S+PGAGDILMGFLGSVI+SFAFSMFKQRKLVKRHAAEIF+SVI+ST+FSLYS
Sbjct: 324  GNYLTKVASDPGAGDILMGFLGSVILSFAFSMFKQRKLVKRHAAEIFTSVIVSTVFSLYS 383

Query: 543  TALVGRLVGLEPALTVSILPRCITVALALSIVSFFEGTNPSXXXXXXXXXXXXXXNFVQT 722
            TALVGRLVGLEP+LTVSILPRCITVALALSIVS FEGTN S              NFVQ 
Sbjct: 384  TALVGRLVGLEPSLTVSILPRCITVALALSIVSLFEGTNSSLTAAVVVVTGLIGANFVQV 443

Query: 723  MLDKLRLQDPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLLCSVPMV 902
            +LDKLRL+DPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLLCSVP V
Sbjct: 444  VLDKLRLRDPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLLCSVPAV 503

Query: 903  RQSLLLIVG 929
            RQSLL +VG
Sbjct: 504  RQSLLAVVG 512


>emb|CBI31242.3| unnamed protein product [Vitis vinifera]
          Length = 450

 Score =  461 bits (1187), Expect = e-127
 Identities = 237/309 (76%), Positives = 260/309 (84%)
 Frame = +3

Query: 3    SLAVAGYTAIAVRKMVKTEMVPAEPMTKPSPFSGIEVWSWTGVFVISFATALLNPTALGT 182
            SL+VAGYTAIAVRK+VKTEM+PAEPM KPSPF+ IEVW+WTG+F+ISF +ALL PT LGT
Sbjct: 142  SLSVAGYTAIAVRKIVKTEMIPAEPMEKPSPFTSIEVWTWTGIFLISFVSALLYPTLLGT 201

Query: 183  SASTCLPFLLAATVLGYMVGSGLPSNAKKVLHPIISCXXXXXXXXXXFGYFSRSGVDAVL 362
            +A TCLPFLLA+TVLGY+VGSG PS  KKV HPII C          FGYFS+SG+  VL
Sbjct: 202  NARTCLPFLLASTVLGYVVGSGFPSTVKKVFHPIICCALSADLAALAFGYFSQSGLYPVL 261

Query: 363  GDYLTKVSSNPGAGDILMGFLGSVIISFAFSMFKQRKLVKRHAAEIFSSVIISTLFSLYS 542
            G YLTK SSNPGAGDILMGFLGSVI+SFAFSMFKQRKLVKRHAAEIF+S+IIST+FSLYS
Sbjct: 262  GYYLTKASSNPGAGDILMGFLGSVILSFAFSMFKQRKLVKRHAAEIFTSIIISTIFSLYS 321

Query: 543  TALVGRLVGLEPALTVSILPRCITVALALSIVSFFEGTNPSXXXXXXXXXXXXXXNFVQT 722
            TA +GR++GLE  LTVSILPRCITVALALSIVS FEG N S              NFVQ 
Sbjct: 322  TAFIGRILGLEQDLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVLTGLVGANFVQA 381

Query: 723  MLDKLRLQDPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLLCSVPMV 902
            +LDKL+ +DPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLLCSVP V
Sbjct: 382  VLDKLKFRDPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLLCSVPAV 441

Query: 903  RQSLLLIVG 929
            RQSLL IVG
Sbjct: 442  RQSLLAIVG 450


>ref|XP_002277191.1| PREDICTED: uncharacterized protein LOC100250226 [Vitis vinifera]
          Length = 434

 Score =  461 bits (1187), Expect = e-127
 Identities = 237/309 (76%), Positives = 260/309 (84%)
 Frame = +3

Query: 3    SLAVAGYTAIAVRKMVKTEMVPAEPMTKPSPFSGIEVWSWTGVFVISFATALLNPTALGT 182
            SL+VAGYTAIAVRK+VKTEM+PAEPM KPSPF+ IEVW+WTG+F+ISF +ALL PT LGT
Sbjct: 126  SLSVAGYTAIAVRKIVKTEMIPAEPMEKPSPFTSIEVWTWTGIFLISFVSALLYPTLLGT 185

Query: 183  SASTCLPFLLAATVLGYMVGSGLPSNAKKVLHPIISCXXXXXXXXXXFGYFSRSGVDAVL 362
            +A TCLPFLLA+TVLGY+VGSG PS  KKV HPII C          FGYFS+SG+  VL
Sbjct: 186  NARTCLPFLLASTVLGYVVGSGFPSTVKKVFHPIICCALSADLAALAFGYFSQSGLYPVL 245

Query: 363  GDYLTKVSSNPGAGDILMGFLGSVIISFAFSMFKQRKLVKRHAAEIFSSVIISTLFSLYS 542
            G YLTK SSNPGAGDILMGFLGSVI+SFAFSMFKQRKLVKRHAAEIF+S+IIST+FSLYS
Sbjct: 246  GYYLTKASSNPGAGDILMGFLGSVILSFAFSMFKQRKLVKRHAAEIFTSIIISTIFSLYS 305

Query: 543  TALVGRLVGLEPALTVSILPRCITVALALSIVSFFEGTNPSXXXXXXXXXXXXXXNFVQT 722
            TA +GR++GLE  LTVSILPRCITVALALSIVS FEG N S              NFVQ 
Sbjct: 306  TAFIGRILGLEQDLTVSILPRCITVALALSIVSLFEGANSSLTAAVVVLTGLVGANFVQA 365

Query: 723  MLDKLRLQDPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLLCSVPMV 902
            +LDKL+ +DPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLLCSVP V
Sbjct: 366  VLDKLKFRDPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLLCSVPAV 425

Query: 903  RQSLLLIVG 929
            RQSLL IVG
Sbjct: 426  RQSLLAIVG 434


>ref|XP_002304362.1| predicted protein [Populus trichocarpa] gi|222841794|gb|EEE79341.1|
            predicted protein [Populus trichocarpa]
          Length = 404

 Score =  461 bits (1186), Expect = e-127
 Identities = 237/309 (76%), Positives = 258/309 (83%)
 Frame = +3

Query: 3    SLAVAGYTAIAVRKMVKTEMVPAEPMTKPSPFSGIEVWSWTGVFVISFATALLNPTALGT 182
            SL VAG+TAIAVRKMVKTEM  AEPM KPSPFS +E+W+W+GVF++SF  ALL  TALGT
Sbjct: 96   SLCVAGFTAIAVRKMVKTEMTDAEPMAKPSPFSPLEIWAWSGVFLVSFVVALLYRTALGT 155

Query: 183  SASTCLPFLLAATVLGYMVGSGLPSNAKKVLHPIISCXXXXXXXXXXFGYFSRSGVDAVL 362
            +A TCLPFLLA+TVLGYMVGSGLPS  KKV HPII C          FG+ S+SG+D VL
Sbjct: 156  AARTCLPFLLASTVLGYMVGSGLPSGVKKVFHPIICCALSADLAALAFGFLSQSGLDPVL 215

Query: 363  GDYLTKVSSNPGAGDILMGFLGSVIISFAFSMFKQRKLVKRHAAEIFSSVIISTLFSLYS 542
            G YLTKVSSNPGAGD+LMGFLG VI+SFAFSMFKQRKLVKRHAAEIF+SVI++TLFSLYS
Sbjct: 216  GYYLTKVSSNPGAGDVLMGFLGPVILSFAFSMFKQRKLVKRHAAEIFTSVIVATLFSLYS 275

Query: 543  TALVGRLVGLEPALTVSILPRCITVALALSIVSFFEGTNPSXXXXXXXXXXXXXXNFVQT 722
            TALVGRLVGLEP LTVSI+PRCITVALALSIVSFFEG N S              NFVQ 
Sbjct: 276  TALVGRLVGLEPTLTVSIIPRCITVALALSIVSFFEGANSSLTAAVVVVTGLIGANFVQA 335

Query: 723  MLDKLRLQDPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLLCSVPMV 902
            +LDKL  +DPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSL CSVP V
Sbjct: 336  VLDKLNFRDPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYALTGIFGSLFCSVPAV 395

Query: 903  RQSLLLIVG 929
            RQSLL I+G
Sbjct: 396  RQSLLAIIG 404


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