BLASTX nr result

ID: Cimicifuga21_contig00021343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021343
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61967.1| hypothetical protein VITISV_010916 [Vitis vinifera]   140   2e-31
ref|XP_003635365.1| PREDICTED: transcription factor bHLH36-like,...   140   4e-31
ref|XP_002305793.1| predicted protein [Populus trichocarpa] gi|2...   130   2e-28
ref|XP_002329784.1| predicted protein [Populus trichocarpa] gi|2...   127   3e-28
ref|XP_002509465.1| DNA binding protein, putative [Ricinus commu...   123   5e-26

>emb|CAN61967.1| hypothetical protein VITISV_010916 [Vitis vinifera]
          Length = 174

 Score =  140 bits (352), Expect(2) = 2e-31
 Identities = 73/152 (48%), Positives = 100/152 (65%)
 Frame = -1

Query: 702 MATQQGSSNTERKIVEQNRRNQMKNLYCKLISLLPNQNSEEVMSLAAQVDEASYYXXXXX 523
           M +   SS T+RK +E+NRRN MK+LY KL SL+P+Q S E ++L  Q+DEA+ Y     
Sbjct: 1   MESNPSSSRTDRKTIERNRRNHMKSLYSKLNSLVPHQTSREAITLPDQLDEAANYIKRLQ 60

Query: 522 XXXXXXXXXXXXXMTGENASIKLSSGPKDQMRPTEIEIHTMGSALEVILISGMDSRSMFY 343
                        M  E  +   +SG    ++P +I+IH  GSALEV+LI+G+D + MF 
Sbjct: 61  EKLEKMKERKDNLMGFERPNTSPNSGAMVGLKPPQIDIHEKGSALEVVLITGLDFQFMFN 120

Query: 342 KIIRVLHEEGAEVVNASFSILDDNIFHTIHAE 247
           + IRVLHEEGAE+VNASFS++DD +FHTIHA+
Sbjct: 121 ETIRVLHEEGAEIVNASFSVVDDTVFHTIHAQ 152



 Score = 22.3 bits (46), Expect(2) = 2e-31
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 202 VGYGIARVSMRLEKLI 155
           +G+G AR+S RL+K +
Sbjct: 158 LGHGAARISERLKKFV 173


>ref|XP_003635365.1| PREDICTED: transcription factor bHLH36-like, partial [Vitis
           vinifera] gi|296086982|emb|CBI33238.3| unnamed protein
           product [Vitis vinifera]
          Length = 152

 Score =  140 bits (352), Expect = 4e-31
 Identities = 73/152 (48%), Positives = 100/152 (65%)
 Frame = -1

Query: 702 MATQQGSSNTERKIVEQNRRNQMKNLYCKLISLLPNQNSEEVMSLAAQVDEASYYXXXXX 523
           M +   SS T+RK +E+NRRN MK+LY KL SL+P+Q S E ++L  Q+DEA+ Y     
Sbjct: 1   MESNPSSSRTDRKTIERNRRNHMKSLYSKLNSLVPHQTSREAITLPDQLDEAANYIKRLQ 60

Query: 522 XXXXXXXXXXXXXMTGENASIKLSSGPKDQMRPTEIEIHTMGSALEVILISGMDSRSMFY 343
                        M  E  +   +SG    ++P +I+IH  GSALEV+LI+G+D + MF 
Sbjct: 61  EKLEKMKERKDNLMGFERPNTSPNSGAMVGLKPPQIDIHEKGSALEVVLITGLDFQFMFN 120

Query: 342 KIIRVLHEEGAEVVNASFSILDDNIFHTIHAE 247
           + IRVLHEEGAE+VNASFS++DD +FHTIHA+
Sbjct: 121 ETIRVLHEEGAEIVNASFSVVDDTVFHTIHAQ 152


>ref|XP_002305793.1| predicted protein [Populus trichocarpa] gi|222848757|gb|EEE86304.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score =  130 bits (328), Expect = 2e-28
 Identities = 75/156 (48%), Positives = 103/156 (66%), Gaps = 4/156 (2%)
 Frame = -1

Query: 702 MATQQGSSNTERKIVEQNRRNQMKNLYCKLISLLPNQNSEE-VMSLAAQVDEASYYXXXX 526
           M     SS T+RK++E+NRRNQMK LY +L SL+P+Q+S E V+S+  Q+DEA+ Y    
Sbjct: 1   MEHNPSSSRTDRKLIERNRRNQMKELYSQLNSLVPHQSSREPVLSVPDQLDEAASYIKRL 60

Query: 525 XXXXXXXXXXXXXXMTGENA--SIKLSSGPKDQ-MRPTEIEIHTMGSALEVILISGMDSR 355
                         M  E A  + K SSG K   +R  +IE+  MGS LEV+L++G+DSR
Sbjct: 61  QTNLEKMKEKKDSLMGMERADYTCKNSSGGKTAGLRSPQIEVSEMGSTLEVVLMNGLDSR 120

Query: 354 SMFYKIIRVLHEEGAEVVNASFSILDDNIFHTIHAE 247
            MF +IIRVLHEEGAE++NAS S++ D +FHTIH++
Sbjct: 121 FMFIEIIRVLHEEGAEIINASLSVVQDTVFHTIHSK 156


>ref|XP_002329784.1| predicted protein [Populus trichocarpa] gi|222870846|gb|EEF07977.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  127 bits (320), Expect(2) = 3e-28
 Identities = 72/156 (46%), Positives = 99/156 (63%), Gaps = 4/156 (2%)
 Frame = -1

Query: 702 MATQQGSSNTERKIVEQNRRNQMKNLYCKLISLLPNQNSEE-VMSLAAQVDEASYYXXXX 526
           M     SS T+RK +E+NRRNQMK LY +L SL+P+Q+S E V+SL  Q+DEA+ Y    
Sbjct: 1   MENNPSSSRTDRKTIERNRRNQMKALYSQLNSLVPHQSSREPVLSLPDQLDEAASYIKRL 60

Query: 525 XXXXXXXXXXXXXXMTGEN---ASIKLSSGPKDQMRPTEIEIHTMGSALEVILISGMDSR 355
                         M  E    AS+   +G    +R  +IEI   GS LEV+LI+G+D +
Sbjct: 61  QTNLERMKEKKDNLMGTERKNYASMSSCNGTTTGLRSPQIEIRETGSTLEVVLITGLDGQ 120

Query: 354 SMFYKIIRVLHEEGAEVVNASFSILDDNIFHTIHAE 247
            MF + IRVLHEEGAE++NASFS+++D +FHTIH++
Sbjct: 121 FMFNETIRVLHEEGAEIINASFSVVEDTVFHTIHSK 156



 Score = 23.9 bits (50), Expect(2) = 3e-28
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 217 IGESKVGYGIARVSMRLEKLIHD 149
           +G+S    G AR+S RL + + D
Sbjct: 157 VGDSAPSNGAARISQRLNQFVQD 179


>ref|XP_002509465.1| DNA binding protein, putative [Ricinus communis]
           gi|223549364|gb|EEF50852.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 210

 Score =  123 bits (308), Expect = 5e-26
 Identities = 68/155 (43%), Positives = 99/155 (63%), Gaps = 2/155 (1%)
 Frame = -1

Query: 705 LMATQQGSSNTERKIVEQNRRNQMKNLYCKLISLLPNQNSEEVMSLAAQVDEASYYXXXX 526
           LM      S T+RK +E+NRRNQMK LY +L SL+P+ +S E +SL  Q+DEA+ Y    
Sbjct: 28  LMENNPSCSTTDRKTIERNRRNQMKALYSQLNSLVPHHSSRESVSLPDQLDEAANYIKKL 87

Query: 525 XXXXXXXXXXXXXXMTGE--NASIKLSSGPKDQMRPTEIEIHTMGSALEVILISGMDSRS 352
                         M  E  NAS   S+    ++R  +IE++ +GSALEV+L++G+D + 
Sbjct: 88  QIKLEKMKERKDSLMGIERPNASAGCSTRAGMRLRSPQIEVNGIGSALEVVLVTGLDCQF 147

Query: 351 MFYKIIRVLHEEGAEVVNASFSILDDNIFHTIHAE 247
           +F + IR+L EEGAE+VNA+FS+LDD +FH IH++
Sbjct: 148 LFNETIRILQEEGAEIVNATFSVLDDTVFHIIHSK 182


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