BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021284
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    68   3e-09
ref|XP_002528428.1| conserved hypothetical protein [Ricinus comm...    66   1e-08
ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinif...    64   3e-08
ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g...    64   5e-08
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...    63   9e-08

>ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 394

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 13/110 (11%)
 Frame = +3

Query: 6   ILVRNQPWQKFQDVVYFKGNFYAVDCGGRVVVCELGGAEPLAI------EGVKNYLVESS 167
           IL+ + P     D+++F G FYA+D  GR VV  +G    L++       G K  LVES+
Sbjct: 190 ILINDTP-SPCDDLIFFNGEFYAIDNTGRTVVVAIGSPPVLSLIADSVFGGDKKSLVESN 248

Query: 168 GELLLVR-------RRYQEKSVLFTVFQEDSISKQWVEVQSFRGHSLFLG 296
           GELL+V         R  +++V F VF+ D I   WVEV+S     LFLG
Sbjct: 249 GELLMVDTYFGQGIHRRMKRAVRFKVFKLDQIGHMWVEVESLGNRILFLG 298


>ref|XP_002528428.1| conserved hypothetical protein [Ricinus communis]
           gi|223532164|gb|EEF33970.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 27/125 (21%)
 Frame = +3

Query: 3   WILVRNQPWQKFQDVVYFKGNFYAVDCGGRVVV----CELGGAEPLAIEGVKNYLVESSG 170
           W ++++ P   + DV+ +KGNFYAVD  GR V+     ELG        G K YLVES G
Sbjct: 133 WTIIQDMP-SPYDDVIVYKGNFYAVDNTGRTVIVRLNTELGLIANPVFGGDKKYLVESLG 191

Query: 171 ELLLV-----------------------RRRYQEKSVLFTVFQEDSISKQWVEVQSFRGH 281
           +LLLV                        +   E++V F VF+ D  ++ W+EV+S    
Sbjct: 192 DLLLVDMYLSIDTAEGGLSFGEEFLEHLAQYMSERTVRFKVFKLDKEAQTWIEVKSLGDR 251

Query: 282 SLFLG 296
            LFLG
Sbjct: 252 VLFLG 256


>ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinifera]
          Length = 375

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 13/98 (13%)
 Frame = +3

Query: 42  DVVYFKGNFYAVDCGGRVVVCELGGAEPLA------IEGVKNYLVESSGELLLVRRRYQE 203
           D+++F G FYAVD  GR VV  +G    L+      I G K  LVES+GELL+V   + +
Sbjct: 200 DLIFFNGEFYAVDNTGRTVVVAIGSPPVLSLIADSVIGGNKKSLVESNGELLMVNTYFDQ 259

Query: 204 -------KSVLFTVFQEDSISKQWVEVQSFRGHSLFLG 296
                  ++V F VF+ + I   WVEV++     LFLG
Sbjct: 260 GIHGIMNRAVRFKVFKLNQIGHMWVEVENLGDRILFLG 297


>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
           gi|222850098|gb|EEE87645.1| f-box family protein
           [Populus trichocarpa]
          Length = 410

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 43/124 (34%), Positives = 57/124 (45%), Gaps = 26/124 (20%)
 Frame = +3

Query: 3   WILVRNQPWQKFQDVVYFKGNFYAVDCGGRVVV----CELGGAEPLAIEGVKNYLVESSG 170
           W ++   P   F DV+ +KG FYAVD  GR VV     +LG        G K YLVES G
Sbjct: 195 WTIINEMP-SPFDDVIVYKGRFYAVDNTGRTVVVALDTDLGLVGDPVFGGDKKYLVESKG 253

Query: 171 ELLLVR----------------------RRYQEKSVLFTVFQEDSISKQWVEVQSFRGHS 284
           +LLLV                       +   E++V F VF+ +   K W+EV++     
Sbjct: 254 DLLLVDMYLSIDTDEGLSIGNDVVQDLVQYMSERTVRFKVFKLNEEGKSWIEVKNLEDRV 313

Query: 285 LFLG 296
           LFLG
Sbjct: 314 LFLG 317


>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
           vinifera]
          Length = 387

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 21/123 (17%)
 Frame = +3

Query: 3   WILVRNQPWQKFQDVVYFKGNFYAVDCGGRVVVCELG-GAEPL-------AIEGVKNYLV 158
           W+++ +     + DV++F G FYAVD  GR VV ++  G+ P+          G K  LV
Sbjct: 191 WMIIDDMQ-SPYDDVIFFDGKFYAVDNTGRTVVVDVADGSSPVVNLAASSVFGGDKKVLV 249

Query: 159 ESSGELLLVRRRYQ-------------EKSVLFTVFQEDSISKQWVEVQSFRGHSLFLGY 299
           ES GELLLV   +              E+ + F VF+ D   ++WVE++S     LFLG 
Sbjct: 250 ESEGELLLVDTYFTMYHDDDEHVRWMIERMIHFKVFRLDQREQKWVEIESLGDRLLFLGD 309

Query: 300 NHS 308
           + S
Sbjct: 310 DSS 312