BLASTX nr result

ID: Cimicifuga21_contig00021282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021282
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316170.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_004166076.1| PREDICTED: HIV Tat-specific factor 1 homolog...    91   1e-16
ref|XP_004146418.1| PREDICTED: HIV Tat-specific factor 1 homolog...    91   1e-16
ref|XP_002512940.1| Splicing factor U2AF-associated protein, put...    91   1e-16
dbj|BAJ53149.1| JHL23J11.4 [Jatropha curcas]                           89   3e-16

>ref|XP_002316170.1| predicted protein [Populus trichocarpa] gi|222865210|gb|EEF02341.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 40/53 (75%), Positives = 48/53 (90%)
 Frame = -2

Query: 380 DAQKCVEMMNGRWFGGKQIVASIDDGTVNHALIRDHDSEAARLEQFGAELEAE 222
           DAQ C+E+MNGRWFGG+Q+ AS DDG +NHAL+RDHD +AARLEQFGAELEA+
Sbjct: 445 DAQSCIELMNGRWFGGRQVDASEDDGLINHALVRDHDEDAARLEQFGAELEAD 497


>ref|XP_004166076.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cucumis sativus]
          Length = 498

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 40/53 (75%), Positives = 49/53 (92%)
 Frame = -2

Query: 380 DAQKCVEMMNGRWFGGKQIVASIDDGTVNHALIRDHDSEAARLEQFGAELEAE 222
           DAQKC+E+MNGRWFGGKQI AS DDG VNHA++RD +++AARLEQFG+ELEA+
Sbjct: 446 DAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRDLEADAARLEQFGSELEAD 498


>ref|XP_004146418.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cucumis sativus]
          Length = 496

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 40/53 (75%), Positives = 49/53 (92%)
 Frame = -2

Query: 380 DAQKCVEMMNGRWFGGKQIVASIDDGTVNHALIRDHDSEAARLEQFGAELEAE 222
           DAQKC+E+MNGRWFGGKQI AS DDG VNHA++RD +++AARLEQFG+ELEA+
Sbjct: 444 DAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRDLEADAARLEQFGSELEAD 496


>ref|XP_002512940.1| Splicing factor U2AF-associated protein, putative [Ricinus
           communis] gi|223547951|gb|EEF49443.1| Splicing factor
           U2AF-associated protein, putative [Ricinus communis]
          Length = 518

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 40/53 (75%), Positives = 47/53 (88%)
 Frame = -2

Query: 380 DAQKCVEMMNGRWFGGKQIVASIDDGTVNHALIRDHDSEAARLEQFGAELEAE 222
           DAQ C+E+MNGRWFGG+Q+ AS DDG+VNHAL+RD D +AARLEQFGAELE E
Sbjct: 466 DAQNCIELMNGRWFGGRQVHASEDDGSVNHALVRDLDQDAARLEQFGAELEGE 518


>dbj|BAJ53149.1| JHL23J11.4 [Jatropha curcas]
          Length = 552

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 38/53 (71%), Positives = 48/53 (90%)
 Frame = -2

Query: 380 DAQKCVEMMNGRWFGGKQIVASIDDGTVNHALIRDHDSEAARLEQFGAELEAE 222
           DAQKC+E+MNGRWFGG+Q+ AS DDG+VNHA++RD+  + ARLEQFGAELEA+
Sbjct: 500 DAQKCIELMNGRWFGGRQVHASEDDGSVNHAIVRDYAEDTARLEQFGAELEAD 552


Top