BLASTX nr result

ID: Cimicifuga21_contig00021257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021257
         (1151 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267457.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mit...   334   2e-89
ref|XP_002329853.1| predicted protein [Populus trichocarpa] gi|2...   316   6e-84
ref|XP_002509613.1| immature colon carcinoma transcript, putativ...   309   1e-81
ref|XP_002304436.1| predicted protein [Populus trichocarpa] gi|2...   308   2e-81
ref|XP_004159510.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mit...   295   2e-77

>ref|XP_002267457.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Vitis
           vinifera] gi|296082846|emb|CBI22147.3| unnamed protein
           product [Vitis vinifera]
          Length = 230

 Score =  334 bits (857), Expect = 2e-89
 Identities = 178/231 (77%), Positives = 192/231 (83%), Gaps = 2/231 (0%)
 Frame = +2

Query: 194 MAAIRTLTSMAMKEMIHLSPFLRSRTMFPTTYLKFQHTFGITTTRLISSSGFRCMASDSA 373
           MA IR  T+M +KE+ H+S  LRS  MF      F    G T  R IS S  RC A+DS 
Sbjct: 1   MATIRCTTNMIVKEIFHVSLSLRSERMFQMVLPNFSVYCG-TVNRGISYSRIRCAAADSG 59

Query: 374 D--KKVSARLSQMHQILQEAEDRSFSAGNEPTPKITLGHVTVSFARSGGPGGQNVNKVNT 547
           D  +KVSARLSQ+ Q+LQEAE+RS S GNEPTPKITL HVTVSFARSGGPGGQNVNKVNT
Sbjct: 60  DGGRKVSARLSQVQQLLQEAEERSLSFGNEPTPKITLDHVTVSFARSGGPGGQNVNKVNT 119

Query: 548 KVDMRFNVMKAYWLSERIRERILQLEKNRINKDGEIVISSTKTRTQKGNIEDALEKLQAI 727
           KVDMRFNV  AYWLS+R+RERI+Q+EKNRINKDGEIVISSTKTRTQKGNIEDAL KLQAI
Sbjct: 120 KVDMRFNVKNAYWLSDRVRERIMQMEKNRINKDGEIVISSTKTRTQKGNIEDALGKLQAI 179

Query: 728 IDAASYVPPPPSEEQKKKIAKLAAIGEQKRLQNKKALSQKKAIRRTRDSWD 880
           IDAASYVPPPPSEEQKKKIAKLAAIGEQKRLQNKK LSQKKA RR+RDSWD
Sbjct: 180 IDAASYVPPPPSEEQKKKIAKLAAIGEQKRLQNKKVLSQKKAFRRSRDSWD 230


>ref|XP_002329853.1| predicted protein [Populus trichocarpa] gi|222871090|gb|EEF08221.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score =  316 bits (810), Expect = 6e-84
 Identities = 170/233 (72%), Positives = 191/233 (81%), Gaps = 4/233 (1%)
 Frame = +2

Query: 194 MAAIRTLTSMAMKEMIHLSPFLRSRTMFP---TTYLKFQHTFGITT-TRLISSSGFRCMA 361
           MA IRT T+M +K++     FL  R + P   T  L   H   +    R ISS   +C A
Sbjct: 1   MAVIRTTTNMILKQV-----FLNHRLIPPLSVTRTLSNLHWASLEVPNRQISSCRIKCAA 55

Query: 362 SDSADKKVSARLSQMHQILQEAEDRSFSAGNEPTPKITLGHVTVSFARSGGPGGQNVNKV 541
           SD  DKKVSARLSQ+HQ+LQEAE+R+ + GNEPTPKIT GHVTVSFARSGGPGGQNVNKV
Sbjct: 56  SD--DKKVSARLSQVHQLLQEAEERASAVGNEPTPKITRGHVTVSFARSGGPGGQNVNKV 113

Query: 542 NTKVDMRFNVMKAYWLSERIRERILQLEKNRINKDGEIVISSTKTRTQKGNIEDALEKLQ 721
           NTKVDMRFNV KAYWLS+RIRERI+Q+EKNRINKDGEIVISSTKTRTQ GNI+DALEKLQ
Sbjct: 114 NTKVDMRFNVKKAYWLSDRIRERIMQMEKNRINKDGEIVISSTKTRTQTGNIDDALEKLQ 173

Query: 722 AIIDAASYVPPPPSEEQKKKIAKLAAIGEQKRLQNKKALSQKKAIRRTRDSWD 880
           A+IDAASYVPPPPSEEQKKKIAKLA+IGEQKRL++KK LS KKA RR+RDSWD
Sbjct: 174 AVIDAASYVPPPPSEEQKKKIAKLASIGEQKRLRSKKVLSDKKAFRRSRDSWD 226


>ref|XP_002509613.1| immature colon carcinoma transcript, putative [Ricinus communis]
           gi|223549512|gb|EEF51000.1| immature colon carcinoma
           transcript, putative [Ricinus communis]
          Length = 234

 Score =  309 bits (791), Expect = 1e-81
 Identities = 170/239 (71%), Positives = 189/239 (79%), Gaps = 10/239 (4%)
 Frame = +2

Query: 194 MAAIRTLTSMAMKEMIHL----------SPFLRSRTMFPTTYLKFQHTFGITTTRLISSS 343
           MAA RT T+M +KE+++           S  L S  + PT        F   T R +S S
Sbjct: 1   MAATRTATTMILKEIVYCRLRLSFSSLSSSSLPSLRLTPTNLHANAVKF---TRRELSFS 57

Query: 344 GFRCMASDSADKKVSARLSQMHQILQEAEDRSFSAGNEPTPKITLGHVTVSFARSGGPGG 523
             RC ASD  DKKVSARLSQ+ Q+LQEAE+++ SAGNEP PKITL HVTVSFARSGGPGG
Sbjct: 58  RIRCAASD--DKKVSARLSQVQQLLQEAEEQAISAGNEPPPKITLDHVTVSFARSGGPGG 115

Query: 524 QNVNKVNTKVDMRFNVMKAYWLSERIRERILQLEKNRINKDGEIVISSTKTRTQKGNIED 703
           QNVNKVNTKVDMRFNV  AYWLS+RIR+RI+Q+EKNRINKDGEIVISSTKTRTQKGNIED
Sbjct: 116 QNVNKVNTKVDMRFNVKDAYWLSDRIRDRIMQMEKNRINKDGEIVISSTKTRTQKGNIED 175

Query: 704 ALEKLQAIIDAASYVPPPPSEEQKKKIAKLAAIGEQKRLQNKKALSQKKAIRRTRDSWD 880
           AL KLQAIIDAASYVPPPPSEEQKKKIAKLAAIGEQKRL++KK LS KKA RR+R SWD
Sbjct: 176 ALAKLQAIIDAASYVPPPPSEEQKKKIAKLAAIGEQKRLKSKKVLSDKKAFRRSRISWD 234


>ref|XP_002304436.1| predicted protein [Populus trichocarpa] gi|222841868|gb|EEE79415.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  308 bits (789), Expect = 2e-81
 Identities = 167/236 (70%), Positives = 186/236 (78%), Gaps = 7/236 (2%)
 Frame = +2

Query: 194 MAAIRTLTSMAMKEMIHLSPFLRSRTMFPTTYLKFQHTFGI-------TTTRLISSSGFR 352
           MA IRT T+M +K++     FL +  + P        T G           R IS S  +
Sbjct: 1   MAVIRTSTNMILKQV-----FLDNLLIPPVPSFSVSRTLGNLRWANLKVPNREISFSRIK 55

Query: 353 CMASDSADKKVSARLSQMHQILQEAEDRSFSAGNEPTPKITLGHVTVSFARSGGPGGQNV 532
           C  SD  DKKVS+RLSQ+ Q+LQEAE+R+ +AGNEP PKITL HVTVSFARSGGPGGQNV
Sbjct: 56  CAGSD--DKKVSSRLSQVQQLLQEAEERASAAGNEPPPKITLDHVTVSFARSGGPGGQNV 113

Query: 533 NKVNTKVDMRFNVMKAYWLSERIRERILQLEKNRINKDGEIVISSTKTRTQKGNIEDALE 712
           NKVNTKVDMRFNV  AYWLSERIRERI+Q+EKNRINKDGEIVISSTKTRTQKGNI+DAL 
Sbjct: 114 NKVNTKVDMRFNVKNAYWLSERIRERIMQMEKNRINKDGEIVISSTKTRTQKGNIDDALA 173

Query: 713 KLQAIIDAASYVPPPPSEEQKKKIAKLAAIGEQKRLQNKKALSQKKAIRRTRDSWD 880
           KLQAIID ASYVPPPPSEEQKKKIAKLAAIGEQKRL++KKALS KKA RR+RDSWD
Sbjct: 174 KLQAIIDVASYVPPPPSEEQKKKIAKLAAIGEQKRLKSKKALSDKKAFRRSRDSWD 229


>ref|XP_004159510.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
           [Cucumis sativus]
          Length = 232

 Score =  295 bits (754), Expect = 2e-77
 Identities = 159/234 (67%), Positives = 182/234 (77%), Gaps = 5/234 (2%)
 Frame = +2

Query: 194 MAAIRTLTSMAMKEMIHLSPFLRSRTMFPTTYLKFQHTFGITTT---RLISSSGFRCMAS 364
           MA IRT T++ ++E++H  P+       P+ + K  H    T     R IS     C AS
Sbjct: 1   MAVIRTTTNIILREILHSQPYFSLSP--PSIFPKLLHHPNATLRFRLRDISFGRVLCAAS 58

Query: 365 DSADK--KVSARLSQMHQILQEAEDRSFSAGNEPTPKITLGHVTVSFARSGGPGGQNVNK 538
           DS     KVS+R+SQM Q+L EAE+R+  A  EP PKITL HV V+FARSGGPGGQNVNK
Sbjct: 59  DSPGSGGKVSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSGGPGGQNVNK 118

Query: 539 VNTKVDMRFNVMKAYWLSERIRERILQLEKNRINKDGEIVISSTKTRTQKGNIEDALEKL 718
           VNTKVDMRFNV +AYWLSERIRE+ILQ EKNRINKDGE+VISSTKTRTQKGNIEDALEKL
Sbjct: 119 VNTKVDMRFNVKEAYWLSERIREKILQTEKNRINKDGELVISSTKTRTQKGNIEDALEKL 178

Query: 719 QAIIDAASYVPPPPSEEQKKKIAKLAAIGEQKRLQNKKALSQKKAIRRTRDSWD 880
           QAIIDAASYVPPPPSEEQKKKIAKLAAIGEQ+RL++KK  S KKA RR+R+SWD
Sbjct: 179 QAIIDAASYVPPPPSEEQKKKIAKLAAIGEQRRLKSKKVHSDKKAFRRSRNSWD 232


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