BLASTX nr result

ID: Cimicifuga21_contig00021237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021237
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24131.3| unnamed protein product [Vitis vinifera]              291   5e-77
ref|XP_002265699.1| PREDICTED: general transcription factor 3C p...   291   5e-77
ref|XP_003540640.1| PREDICTED: general transcription factor 3C p...   268   5e-70
ref|XP_003538968.1| PREDICTED: general transcription factor 3C p...   266   2e-69
ref|XP_003607543.1| Transcription factor tau subunit sfc4 [Medic...   265   4e-69

>emb|CBI24131.3| unnamed protein product [Vitis vinifera]
          Length = 915

 Score =  291 bits (746), Expect = 5e-77
 Identities = 140/188 (74%), Positives = 160/188 (85%)
 Frame = -1

Query: 597  ENNMSRPSKFLNHMRRVHTKCVPPIIISGHKLTMISQHQSAARKYLEAYKLQPDSPFINL 418
            EN  S+ SK L+ MR  H  CVPPI+I GH+ TMISQHQ AA++YLEAYKL P++P INL
Sbjct: 728  ENRYSKHSKLLHSMRVRHKDCVPPIVIFGHQFTMISQHQIAAKEYLEAYKLMPENPLINL 787

Query: 417  CVGTALINLALGFRLQNKHQCLAQGFAFLFNNLHLSENSQEGLYNIARAYQHVGLVTLAA 238
            C GTALIN+ALGFRLQNKHQCLAQG AFL+NNL L ENSQE LYNIARAY HVGLV+LA 
Sbjct: 788  CAGTALINIALGFRLQNKHQCLAQGLAFLYNNLRLCENSQEALYNIARAYHHVGLVSLAV 847

Query: 237  TYYEKVLATPEKDYPIPKMPIEDSSLPESRSRGYCNLRREAAYNLHLIYKKSGALDLARQ 58
            TYYEKVLAT E+DYPIP++P E++ L E+R  GYC+LRREAAYNLHLIYKKSGALDLARQ
Sbjct: 848  TYYEKVLATHERDYPIPRLPYENTDLVENRKPGYCDLRREAAYNLHLIYKKSGALDLARQ 907

Query: 57   VLRYHCTL 34
            VL+ HCT+
Sbjct: 908  VLKDHCTI 915


>ref|XP_002265699.1| PREDICTED: general transcription factor 3C polypeptide 3-like [Vitis
            vinifera]
          Length = 1110

 Score =  291 bits (746), Expect = 5e-77
 Identities = 140/188 (74%), Positives = 160/188 (85%)
 Frame = -1

Query: 597  ENNMSRPSKFLNHMRRVHTKCVPPIIISGHKLTMISQHQSAARKYLEAYKLQPDSPFINL 418
            EN  S+ SK L+ MR  H  CVPPI+I GH+ TMISQHQ AA++YLEAYKL P++P INL
Sbjct: 923  ENRYSKHSKLLHSMRVRHKDCVPPIVIFGHQFTMISQHQIAAKEYLEAYKLMPENPLINL 982

Query: 417  CVGTALINLALGFRLQNKHQCLAQGFAFLFNNLHLSENSQEGLYNIARAYQHVGLVTLAA 238
            C GTALIN+ALGFRLQNKHQCLAQG AFL+NNL L ENSQE LYNIARAY HVGLV+LA 
Sbjct: 983  CAGTALINIALGFRLQNKHQCLAQGLAFLYNNLRLCENSQEALYNIARAYHHVGLVSLAV 1042

Query: 237  TYYEKVLATPEKDYPIPKMPIEDSSLPESRSRGYCNLRREAAYNLHLIYKKSGALDLARQ 58
            TYYEKVLAT E+DYPIP++P E++ L E+R  GYC+LRREAAYNLHLIYKKSGALDLARQ
Sbjct: 1043 TYYEKVLATHERDYPIPRLPYENTDLVENRKPGYCDLRREAAYNLHLIYKKSGALDLARQ 1102

Query: 57   VLRYHCTL 34
            VL+ HCT+
Sbjct: 1103 VLKDHCTI 1110


>ref|XP_003540640.1| PREDICTED: general transcription factor 3C polypeptide 3-like
            [Glycine max]
          Length = 919

 Score =  268 bits (685), Expect = 5e-70
 Identities = 133/193 (68%), Positives = 153/193 (79%), Gaps = 5/193 (2%)
 Frame = -1

Query: 597  ENNMSRPSKFLNHMRRVHTKCVPPIIISGHKLTMISQHQSAARKYLEAYKLQPDSPFINL 418
            EN  +R  KF+  M+     CVPPI+ISGH+ T+ S HQ AARKYLEAYKL P++P +NL
Sbjct: 727  ENRDTRHYKFVRGMQGKFVDCVPPILISGHQFTICSHHQDAARKYLEAYKLLPENPLVNL 786

Query: 417  CVGTALINLALGFRLQNKHQCLAQGFAFLFNNLHLSENS-----QEGLYNIARAYQHVGL 253
            CVGTALINLALGFRLQNKHQC+ QG AFL+NN+ + ENS     QE LYNIARA+ HVGL
Sbjct: 787  CVGTALINLALGFRLQNKHQCVVQGLAFLYNNMRICENSQVFFLQESLYNIARAFHHVGL 846

Query: 252  VTLAATYYEKVLATPEKDYPIPKMPIEDSSLPESRSRGYCNLRREAAYNLHLIYKKSGAL 73
            VTLAA YYEKV+A  EKDYPIPK+P E+    E+   GYC+LRREAAYNLHLIYKKSGAL
Sbjct: 847  VTLAAFYYEKVIAICEKDYPIPKLPNENPDSIETHKPGYCDLRREAAYNLHLIYKKSGAL 906

Query: 72   DLARQVLRYHCTL 34
            DLARQVL+ HCTL
Sbjct: 907  DLARQVLKDHCTL 919


>ref|XP_003538968.1| PREDICTED: general transcription factor 3C polypeptide 3-like
            [Glycine max]
          Length = 929

 Score =  266 bits (680), Expect = 2e-69
 Identities = 132/194 (68%), Positives = 153/194 (78%), Gaps = 6/194 (3%)
 Frame = -1

Query: 597  ENNMSRPSKFLNHMRRVHTKCVPPIIISGHKLTMISQHQSAARKYLEAYKLQPDSPFINL 418
            EN  +R  KF+  M+     CVPPI+ISGH+ T+ S HQ AARKYLEAYKL P++P +NL
Sbjct: 736  ENRDTRHYKFVRGMQGKFVDCVPPILISGHQFTICSHHQDAARKYLEAYKLLPENPLVNL 795

Query: 417  CVGTALINLALGFRLQNKHQCLAQGFAFLFNNLHLSENS------QEGLYNIARAYQHVG 256
            CVGTALINLALG RLQNKHQC+ QG AFL+NNL + ENS      QE LYNIARA+ HVG
Sbjct: 796  CVGTALINLALGLRLQNKHQCVVQGLAFLYNNLRICENSQQLIFLQESLYNIARAFHHVG 855

Query: 255  LVTLAATYYEKVLATPEKDYPIPKMPIEDSSLPESRSRGYCNLRREAAYNLHLIYKKSGA 76
            LVTLA  YYEKV+A  E+DYPIPK+P E+S + E+   GYC+LRREAAYNLHLIYKKSGA
Sbjct: 856  LVTLAVIYYEKVIAMCERDYPIPKLPNENSDIIETHKPGYCDLRREAAYNLHLIYKKSGA 915

Query: 75   LDLARQVLRYHCTL 34
            LDLARQVLR +CTL
Sbjct: 916  LDLARQVLRDYCTL 929


>ref|XP_003607543.1| Transcription factor tau subunit sfc4 [Medicago truncatula]
            gi|355508598|gb|AES89740.1| Transcription factor tau
            subunit sfc4 [Medicago truncatula]
          Length = 937

 Score =  265 bits (678), Expect = 4e-69
 Identities = 127/188 (67%), Positives = 149/188 (79%)
 Frame = -1

Query: 597  ENNMSRPSKFLNHMRRVHTKCVPPIIISGHKLTMISQHQSAARKYLEAYKLQPDSPFINL 418
            EN  +R  KFL  M+     CVPPI+IS H+ T+ S HQ AARKYLEAYKL P++P +NL
Sbjct: 750  ENRDTRHDKFLRSMQGKFVDCVPPILISAHQFTLCSHHQDAARKYLEAYKLLPENPLVNL 809

Query: 417  CVGTALINLALGFRLQNKHQCLAQGFAFLFNNLHLSENSQEGLYNIARAYQHVGLVTLAA 238
            CVGTAL+NLALGFRL NKHQC+ QG AFL+NNL +  NSQE LYNIARAY HVGLVTLAA
Sbjct: 810  CVGTALVNLALGFRLHNKHQCIVQGLAFLYNNLEICTNSQESLYNIARAYHHVGLVTLAA 869

Query: 237  TYYEKVLATPEKDYPIPKMPIEDSSLPESRSRGYCNLRREAAYNLHLIYKKSGALDLARQ 58
             YYEKV+A  E+DYPIPK+  E   + E+   GYCNLRREAAYNLHLIYK+SGALDLARQ
Sbjct: 870  IYYEKVIAIRERDYPIPKLQNESIDVIENHKPGYCNLRREAAYNLHLIYKRSGALDLARQ 929

Query: 57   VLRYHCTL 34
            VL+ +C++
Sbjct: 930  VLKDYCSV 937


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