BLASTX nr result
ID: Cimicifuga21_contig00021214
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00021214
(2337 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI30150.3| unnamed protein product [Vitis vinifera] 554 e-155
ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3... 527 e-147
ref|XP_002326378.1| predicted protein [Populus trichocarpa] gi|2... 512 e-142
ref|XP_002316395.1| predicted protein [Populus trichocarpa] gi|2... 488 e-135
ref|XP_004143360.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3... 464 e-128
>emb|CBI30150.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 554 bits (1428), Expect = e-155
Identities = 279/516 (54%), Positives = 367/516 (71%), Gaps = 8/516 (1%)
Frame = +1
Query: 523 DGVSCPICMESWSSEGSHQVCCLPCGHVYGFSCIDKWIRQCRRNFAKCPQCSRRCGVKDI 702
DG+ CPICME+W+S G HQVCCLPCGH+YG SCI KW +QC R+ KCPQC R+C ++++
Sbjct: 105 DGLCCPICMEAWTSGGEHQVCCLPCGHIYGISCIKKWFQQCGRSSGKCPQCKRKCTLRNV 164
Query: 703 IKLYVSRIAVVDGEHDKKLRSLHAENEFLK-------LKIVSLHERICQ-DKEEKMCKEE 858
LY SR+ VD + KK+RSL A+ L+ +K H+R + + E
Sbjct: 165 RTLYASRVVAVDEDLRKKIRSLEAKCASLEKKNADWCMKESDWHKREADLHLQVQQLIER 224
Query: 859 ASRLENISSREMQGRTSEFITSAGDSQGQAPLLGRTSSYCGQASSCCNFELEDELVVEGA 1038
+ LE +SS EM GR S + + G + + G+ S CNF L+ EL V+GA
Sbjct: 225 TTYLERLSS-EMHGRGSGLVAARGHNFAEN---------FGRRGSSCNFVLQKELQVDGA 274
Query: 1039 RLFDMDGSNRILILARRLPGMGGHHVLTKISLMYPYDSENIQLPLSTKAVKDLRVSPCAG 1218
R FD+D S IL++ARRL G GG HVLTK+SL+ P++ E+I LP TKAVKDLRVSP
Sbjct: 275 RYFDIDASGEILVIARRLSGTGGTHVLTKMSLISPHEIEDILLPSGTKAVKDLRVSPAKC 334
Query: 1219 KLVLFASLGKKLSILSMESNNIVLTYDLPSPAWSCSWDLNSPHHLYAGLQNGTLLVFDMR 1398
+L L ASLGKKLS+LSMESNN++LTYDLP+ AWSCSWDLNS H++YAGLQNG L+VFDMR
Sbjct: 335 RLALLASLGKKLSVLSMESNNVILTYDLPTAAWSCSWDLNSSHYMYAGLQNGMLMVFDMR 394
Query: 1399 QTARPMESINGMSCSPIHTLHSLMHKASTPRDGGTILSASSIGPCIWNTGGVGERPFLVP 1578
QTARPM I+G + +PIHT+ S++H ++ P T+LSASS+G C WN GG ERPFLVP
Sbjct: 395 QTARPMAEISGPTSNPIHTIQSVLHNSTLPSGVSTLLSASSVGLCQWNFGGSEERPFLVP 454
Query: 1579 EMENQGVCISLAYCPSTDDIVASFRPKVQMAYDVVQPSLPLSQSPTVLGRGILGSHVLIK 1758
E +N GVCISLA+CPS+D+IV++FRPKV+M+ ++ L +P+V+G+G+ GSHVL+K
Sbjct: 455 ETKNHGVCISLAHCPSSDNIVSTFRPKVEMSNEIAVSQYSL--TPSVMGQGMQGSHVLLK 512
Query: 1759 RVRGNCYSKLASSYANVNDVRMLKSAIVNVENCNPLFAYGDELTRGLSLCELPSLRVMRT 1938
RV GNCY KL SS ANVND+R+ +SAI+++++ +PLF GDE+T L L ELPSLRV +
Sbjct: 513 RVGGNCYQKLGSSCANVNDIRLQRSAIIDLQSHHPLFVSGDEITHELVLQELPSLRVSQR 572
Query: 1939 LQPHQYPILDVKFSASLGSGILGCTSEDKLQLFSAK 2046
L+ ++P+ DVK+S L +L C SED LQ FSAK
Sbjct: 573 LKSQKHPLRDVKYSHDLSPSLLCCLSEDTLQFFSAK 608
>ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Vitis vinifera]
Length = 567
Score = 527 bits (1357), Expect = e-147
Identities = 269/508 (52%), Positives = 348/508 (68%)
Frame = +1
Query: 523 DGVSCPICMESWSSEGSHQVCCLPCGHVYGFSCIDKWIRQCRRNFAKCPQCSRRCGVKDI 702
DG+ CPICME+W+S G HQVCCLPCGH+YG SCI KW +QC R+ KCPQC R+C ++++
Sbjct: 105 DGLCCPICMEAWTSGGEHQVCCLPCGHIYGISCIKKWFQQCGRSSGKCPQCKRKCTLRNV 164
Query: 703 IKLYVSRIAVVDGEHDKKLRSLHAENEFLKLKIVSLHERICQDKEEKMCKEEASRLENIS 882
LY SR+ VD + KK+RSL A K SL + K C +E
Sbjct: 165 RTLYASRVVAVDEDLRKKIRSLEA-------KCASLEK-----KNADWCMKE-------- 204
Query: 883 SREMQGRTSEFITSAGDSQGQAPLLGRTSSYCGQASSCCNFELEDELVVEGARLFDMDGS 1062
S++ D Q L +E EL V+GAR FD+D S
Sbjct: 205 --------SDWHKREADLHLQVQQL-----------------IEKELQVDGARYFDIDAS 239
Query: 1063 NRILILARRLPGMGGHHVLTKISLMYPYDSENIQLPLSTKAVKDLRVSPCAGKLVLFASL 1242
IL++ARRL G GG HVLTK+SL+ P++ E+I LP TKAVKDLRVSP +L L ASL
Sbjct: 240 GEILVIARRLSGTGGTHVLTKMSLISPHEIEDILLPSGTKAVKDLRVSPAKCRLALLASL 299
Query: 1243 GKKLSILSMESNNIVLTYDLPSPAWSCSWDLNSPHHLYAGLQNGTLLVFDMRQTARPMES 1422
GKKLS+LSMESNN++LTYDLP+ AWSCSWDLNS H++YAGLQNG L+VFDMRQTARPM
Sbjct: 300 GKKLSVLSMESNNVILTYDLPTAAWSCSWDLNSSHYMYAGLQNGMLMVFDMRQTARPMAE 359
Query: 1423 INGMSCSPIHTLHSLMHKASTPRDGGTILSASSIGPCIWNTGGVGERPFLVPEMENQGVC 1602
I+G + +PIHT+ S++H ++ P T+LSASS+G C WN GG ERPFLVPE +N GVC
Sbjct: 360 ISGPTSNPIHTIQSVLHNSTLPSGVSTLLSASSVGLCQWNFGGSEERPFLVPETKNHGVC 419
Query: 1603 ISLAYCPSTDDIVASFRPKVQMAYDVVQPSLPLSQSPTVLGRGILGSHVLIKRVRGNCYS 1782
ISLA+CPS+D+IV++FRPKV+M+ ++ L +P+V+G+G+ GSHVL+KRV GNCY
Sbjct: 420 ISLAHCPSSDNIVSTFRPKVEMSNEIAVSQYSL--TPSVMGQGMQGSHVLLKRVGGNCYQ 477
Query: 1783 KLASSYANVNDVRMLKSAIVNVENCNPLFAYGDELTRGLSLCELPSLRVMRTLQPHQYPI 1962
KL SS ANVND+R+ +SAI+++++ +PLF GDE+T L L ELPSLRV + L+ ++P+
Sbjct: 478 KLGSSCANVNDIRLQRSAIIDLQSHHPLFVSGDEITHELVLQELPSLRVSQRLKSQKHPL 537
Query: 1963 LDVKFSASLGSGILGCTSEDKLQLFSAK 2046
DVK+S L +L C SED LQ FSAK
Sbjct: 538 RDVKYSHDLSPSLLCCLSEDTLQFFSAK 565
>ref|XP_002326378.1| predicted protein [Populus trichocarpa] gi|222833571|gb|EEE72048.1|
predicted protein [Populus trichocarpa]
Length = 681
Score = 512 bits (1319), Expect = e-142
Identities = 270/518 (52%), Positives = 361/518 (69%), Gaps = 8/518 (1%)
Frame = +1
Query: 523 DGVSCPICMESWSSEGSHQVCCLPCGHVYGFSCIDKWIRQCRRNFAKCPQCSRRCGVKDI 702
DG+ CPICME+W++EG H +CCLPCGH++G SCI+KW+RQ R AKCPQC+R+ ++DI
Sbjct: 170 DGLFCPICMEAWTNEGDHHICCLPCGHLFGLSCIEKWLRQ-RGRLAKCPQCNRKGTLRDI 228
Query: 703 IKLYVSRIAVVDGEHDKKLRSLHAENEFLKLKIVSLHERICQDK--------EEKMCKEE 858
KL+V RIAVVD E K++R L + L K V L ++ + K E + CKE
Sbjct: 229 RKLFVPRIAVVDEESQKRIRFLEEKCASLVKKDVDLCKKESEWKRREAALQLEVQKCKER 288
Query: 859 ASRLENISSREMQGRTSEFITSAGDSQGQAPLLGRTSSYCGQASSCCNFELEDELVVEGA 1038
LE++ ++Q R S T+ SQG S + Q SS C F L+ EL V+GA
Sbjct: 289 TIYLEHLLG-DLQSRPSGVATAYRGSQGHEFGNSIYSDFNRQGSSSC-FMLQRELRVDGA 346
Query: 1039 RLFDMDGSNRILILARRLPGMGGHHVLTKISLMYPYDSENIQLPLSTKAVKDLRVSPCAG 1218
RLFD+D S +IL+L RR+P MGG HVLTK+SL+ P++SE+I LP +TK +KDL +SP G
Sbjct: 347 RLFDVDASGKILLLVRRVPMMGGSHVLTKMSLIPPHESEDIFLPPATKIIKDLHISPTNG 406
Query: 1219 KLVLFASLGKKLSILSMESNNIVLTYDLPSPAWSCSWDLNSPHHLYAGLQNGTLLVFDMR 1398
L LFASLGKKLS+LSMESNN++L+YDLP+ AWSCSWDLN H++YAGLQNG+LLVFDMR
Sbjct: 407 SLALFASLGKKLSVLSMESNNVILSYDLPAAAWSCSWDLNCSHYVYAGLQNGSLLVFDMR 466
Query: 1399 QTARPMESINGMSCSPIHTLHSLMHKASTPRDGGTILSASSIGPCIWNTGGVGERPFLVP 1578
T P+ES G + PIHT+ SL H ++ P T++SASS+G C WN GG ERPFL+P
Sbjct: 467 ITGSPVESRLGHTTDPIHTVQSLQHISTLPSGVKTVVSASSVGMCQWNFGGEEERPFLIP 526
Query: 1579 EMENQGVCISLAYCPSTDDIVASFRPKVQMAYDVVQPSLPLSQSPTVLGRGILGSHVLIK 1758
E NQGVC+SLAYC S+DDIV S+RP+V+M+ +VV S L + G+G+LGSH+ +K
Sbjct: 527 ETTNQGVCVSLAYCASSDDIVVSYRPRVEMSNEVV--SQTLFKPSLATGQGVLGSHLHLK 584
Query: 1759 RVRGNCYSKLASSYANVNDVRMLKSAIVNVENCNPLFAYGDELTRGLSLCELPSLRVMRT 1938
R G+ Y KL + + V+ +R+ KS+I++ +N PLFA GDE++ GL L ELPS +
Sbjct: 585 RA-GSNYEKLGIACSTVSGIRLPKSSIIDRQNQKPLFATGDEVSCGLILQELPSFTATQR 643
Query: 1939 LQPHQYPILDVKFSASLGSGILGCTSEDKLQLFSAKPS 2052
L+ HQ+ I DVK++++ G+LGC SED +QLFS K S
Sbjct: 644 LKSHQHFIYDVKYTSTHSQGLLGCLSEDTVQLFSTKLS 681
>ref|XP_002316395.1| predicted protein [Populus trichocarpa] gi|222865435|gb|EEF02566.1|
predicted protein [Populus trichocarpa]
Length = 605
Score = 488 bits (1255), Expect = e-135
Identities = 263/513 (51%), Positives = 339/513 (66%)
Frame = +1
Query: 523 DGVSCPICMESWSSEGSHQVCCLPCGHVYGFSCIDKWIRQCRRNFAKCPQCSRRCGVKDI 702
DG++C ICME W SEG HQV CLPCGH+YGFSCI KW+++ KCPQC+ +C KDI
Sbjct: 117 DGLNCAICMEPWRSEGDHQVSCLPCGHLYGFSCISKWLQRPVPT-TKCPQCNAKCKFKDI 175
Query: 703 IKLYVSRIAVVDGEHDKKLRSLHAENEFLKLKIVSLHERICQDKEEKMCKEEASRLENIS 882
KLY + + V+D KK+ SL E LK E+ + EN S
Sbjct: 176 RKLYTTPVVVIDEGLQKKVESLEDEIGSLKT-------------------EKPACTENTS 216
Query: 883 SREMQGRTSEFITSAGDSQGQAPLLGRTSSYCGQASSCCNFELEDELVVEGARLFDMDGS 1062
+M + +F +A ++QG A SY + CNF+L+ EL +EG RLF MD S
Sbjct: 217 FEQMGSKPHQFF-NAKEAQG-AQSGCSFGSYSSKQLLHCNFKLQHELAIEGGRLFAMDFS 274
Query: 1063 NRILILARRLPGMGGHHVLTKISLMYPYDSENIQLPLSTKAVKDLRVSPCAGKLVLFASL 1242
+ LIL RR+ GMGG H+L KI+L+ P ++E+IQLP STKAVKD+++SPC GKL L ASL
Sbjct: 275 YQNLILTRRIAGMGGMHMLNKINLINPRENEDIQLPPSTKAVKDIQISPC-GKLTLLASL 333
Query: 1243 GKKLSILSMESNNIVLTYDLPSPAWSCSWDLNSPHHLYAGLQNGTLLVFDMRQTARPMES 1422
GKKLSILSMESNNIV+TY+L PAWSCSWDLNSPH++YAGLQNG LLVFDMR T P++S
Sbjct: 334 GKKLSILSMESNNIVVTYNLRVPAWSCSWDLNSPHYVYAGLQNGMLLVFDMRGTLNPLQS 393
Query: 1423 INGMSCSPIHTLHSLMHKASTPRDGGTILSASSIGPCIWNTGGVGERPFLVPEMENQGVC 1602
+ G PIHT+H L + +L+ASS+GPC+WNT G+RPFLVP ENQG+C
Sbjct: 394 MVGPVLGPIHTMHPLAQNPVLGSNSQKLLTASSLGPCVWNTDA-GKRPFLVPGFENQGIC 452
Query: 1603 ISLAYCPSTDDIVASFRPKVQMAYDVVQPSLPLSQSPTVLGRGILGSHVLIKRVRGNCYS 1782
SLAY P +DDIVAS+ PK + + V S G L S +L+KR+ + Y
Sbjct: 453 TSLAYGPLSDDIVASYHPKSKKSNATVNSQCIDPDSSPFPGSATLCSQLLVKRIADSHYR 512
Query: 1783 KLASSYANVNDVRMLKSAIVNVENCNPLFAYGDELTRGLSLCELPSLRVMRTLQPHQYPI 1962
L S+ A +++ +M ++AI+N++NC PLFAYGDE TRGL L ELPS V + L+PH +PI
Sbjct: 513 NLGSTSAYLSNGQMARTAIINMQNCFPLFAYGDEATRGLRLKELPSFNVTQNLKPHHHPI 572
Query: 1963 LDVKFSASLGSGILGCTSEDKLQLFSAKPS*KR 2061
LDVK++ + +GILG SEDKLQLFSA+ KR
Sbjct: 573 LDVKYAHNQDTGILGSVSEDKLQLFSAELLQKR 605
>ref|XP_004143360.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Cucumis sativus]
gi|449482586|ref|XP_004156335.1| PREDICTED: E3
ubiquitin-protein ligase RFWD3-like [Cucumis sativus]
Length = 617
Score = 464 bits (1195), Expect = e-128
Identities = 256/567 (45%), Positives = 355/567 (62%), Gaps = 19/567 (3%)
Frame = +1
Query: 409 QVDDRSSREQGEPSTPSSSKRIXXXXXXXXXXXXXXXTDGVSCPICMESWSSEGSHQVCC 588
+VD R E GE S+ + D + C ICM++W++ G H +CC
Sbjct: 83 EVDKRRRTEGGEASSSQNE-------------WNRSENDDMICSICMDAWTNYGEHHICC 129
Query: 589 LPCGHVYGFSCIDKWIRQCRRNFAKCPQCSRRCGVKDIIKLYVSRIAVVDGEHDKKLRSL 768
LPCGH+YG SCI++W++Q R+N KCPQC+R+C KD+ K++ RI DGE K+++SL
Sbjct: 130 LPCGHLYGMSCINRWLQQ-RKNAGKCPQCNRKCSTKDVRKIFAPRIVAADGESQKRIKSL 188
Query: 769 HAENEFLKLKIVSLHERICQDKEEKMCKEEAS---RLENISS--REMQGRTSEFITSAGD 933
A L + KE CK+E R ++ S RE+ RT+ D
Sbjct: 189 EATCASL------------EKKEANWCKKEVEWKKRETDMQSKLRELSERTNYLEHLLED 236
Query: 934 SQGQAPLL-------GRTSS-------YCGQASSCCNFELEDELVVEGARLFDMDGSNRI 1071
SQ + L G++ S + GQ SSC +F L+ EL+V+GARL D+D SN+I
Sbjct: 237 SQRKPVLANLDCTFQGKSVSEHNFGLRFSGQVSSC-SFILKKELLVDGARLIDVDASNQI 295
Query: 1072 LILARRLPGMGGHHVLTKISLMYPYDSENIQLPLSTKAVKDLRVSPCAGKLVLFASLGKK 1251
+++ARR G GG HVLTKISLM PY+ E+I +P T AV+DL +SP A LVLF+SLGKK
Sbjct: 296 VLVARR--GFGGTHVLTKISLMSPYEREDIGIPFCTNAVRDLHISPAARNLVLFSSLGKK 353
Query: 1252 LSILSMESNNIVLTYDLPSPAWSCSWDLNSPHHLYAGLQNGTLLVFDMRQTARPMESING 1431
L+ILSMESN+I+L YDLP AWSCSWD NS HH+YAGL+NG L++FDMRQT P++ + G
Sbjct: 354 LAILSMESNHIILDYDLPDAAWSCSWDQNSSHHVYAGLKNGLLVMFDMRQTVGPLKILQG 413
Query: 1432 MSCSPIHTLHSLMHKASTPRDGGTILSASSIGPCIWNTGGVGERPFLVPEMENQGVCISL 1611
++ +PIHT+HSL ++ D ++LSAS+ G C WN + E PFL+PE NQGVC SL
Sbjct: 414 LTNNPIHTIHSLSSHSTVSND-KSVLSASAYGICQWNFDALEEGPFLIPE-TNQGVCTSL 471
Query: 1612 AYCPSTDDIVASFRPKVQMAYDVVQPSLPLSQSPTVLGRGILGSHVLIKRVRGNCYSKLA 1791
AYC S D++VAS+RPKV M+ ++V S S T G + G HV K+ + +SKL
Sbjct: 472 AYCSSRDELVASYRPKVGMSNEIVYSQPSPSPSHTA-GHRVDGCHVAFKKEDHHQFSKLG 530
Query: 1792 SSYANVNDVRMLKSAIVNVENCNPLFAYGDELTRGLSLCELPSLRVMRTLQPHQYPILDV 1971
S++AN++ +R+ KS I+++ +CN LF D + L L ELPS R ++ L+ H++P+ DV
Sbjct: 531 SAHANIDAIRLPKSTIIDLPDCNSLFVSADAIMGDLILQELPSFRSVQHLKVHKHPVRDV 590
Query: 1972 KFSASLGSGILGCTSEDKLQLFSAKPS 2052
K+S G+LGC S+D LQLF K S
Sbjct: 591 KYSYGFDGGLLGCLSDDILQLFCTKGS 617