BLASTX nr result

ID: Cimicifuga21_contig00021194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021194
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus ...    62   5e-08
ref|XP_002328860.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
gb|AFK44336.1| unknown [Lotus japonicus]                               57   2e-06
ref|XP_003530495.1| PREDICTED: uncharacterized protein LOC100812...    56   3e-06
ref|XP_003599496.1| F-box [Medicago truncatula] gi|355488544|gb|...    56   3e-06

>ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540440|gb|EEF42009.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 369

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 25/45 (55%), Positives = 37/45 (82%)
 Frame = -3

Query: 137 LPHELIVEILSWLPANYLWKFRCVCKIWLRLLTTDPQFAKLHLDR 3
           LP E+I++ILS LP  +L +F+CVC+ W  L+++DP+FAKLHL+R
Sbjct: 8   LPFEIIIDILSRLPVKHLIQFKCVCRTWQYLISSDPEFAKLHLER 52


>ref|XP_002328860.1| predicted protein [Populus trichocarpa] gi|222839290|gb|EEE77627.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = -3

Query: 143 TSLPHELIVEILSWLPANYLWKFRCVCKIWLRLLTTDPQFAKLHLDR 3
           + LP E+IV+IL++LPA  L KF+CVC+ W R L +DPQFAKLHL R
Sbjct: 2   SKLPQEIIVDILTYLPAKSLIKFKCVCRSW-RSLISDPQFAKLHLKR 47


>gb|AFK44336.1| unknown [Lotus japonicus]
          Length = 193

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/45 (64%), Positives = 32/45 (71%)
 Frame = -3

Query: 143 TSLPHELIVEILSWLPANYLWKFRCVCKIWLRLLTTDPQFAKLHL 9
           T LP EL+VEILS LP   L KFRCVCK W+ LL +DP F K HL
Sbjct: 61  TFLPDELVVEILSRLPVKSLLKFRCVCKSWM-LLISDPYFIKKHL 104


>ref|XP_003530495.1| PREDICTED: uncharacterized protein LOC100812622 [Glycine max]
          Length = 975

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/45 (62%), Positives = 30/45 (66%)
 Frame = -3

Query: 137 LPHELIVEILSWLPANYLWKFRCVCKIWLRLLTTDPQFAKLHLDR 3
           LP ELIVEILSWLP   L +FRCV K W  L+   P F KLHL R
Sbjct: 9   LPQELIVEILSWLPVKPLMRFRCVSKAWYSLI-FHPSFIKLHLQR 52


>ref|XP_003599496.1| F-box [Medicago truncatula] gi|355488544|gb|AES69747.1| F-box
           [Medicago truncatula]
          Length = 370

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = -3

Query: 137 LPHELIVEILSWLPANYLWKFRCVCKIWLRLLTTDPQFAKLHLD 6
           LPHELI++IL  LP   L +F+CVCK WL L+ +DP FAK H D
Sbjct: 9   LPHELIIQILLRLPVKSLIRFKCVCKSWLTLI-SDPHFAKSHFD 51


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