BLASTX nr result
ID: Cimicifuga21_contig00021184
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00021184 (1034 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI23877.3| unnamed protein product [Vitis vinifera] 219 9e-55 ref|XP_002276553.1| PREDICTED: 50S ribosomal protein L18-like [V... 219 9e-55 ref|XP_004135173.1| PREDICTED: 50S ribosomal protein L18, chloro... 211 2e-52 ref|XP_002312248.1| predicted protein [Populus trichocarpa] gi|2... 209 1e-51 ref|XP_003613814.1| 50S ribosomal protein L18 [Medicago truncatu... 206 1e-50 >emb|CBI23877.3| unnamed protein product [Vitis vinifera] Length = 164 Score = 219 bits (558), Expect = 9e-55 Identities = 106/157 (67%), Positives = 130/157 (82%) Frame = +3 Query: 309 SLQLKTSGLFQPLPNPFNSHPLHHRNLSFKPLVVKARANTRQESAKVRNRRLQKKFNGSP 488 +LQ K+SGLF N + + N K +V++ARAN +++SAK+RNRRLQ+KFNGSP Sbjct: 8 TLQFKSSGLFGTHSNSISFLSMPITNSFTKAMVIEARANAKKDSAKIRNRRLQRKFNGSP 67 Query: 489 VRPRISVFCSAKQLYVTLVDDQNKKCLFYGNTLQKSIRGEPSCSTIEAAQRVGEELVKAC 668 +PR+SVFCSAKQLY LVDDQNK+CLFYG+TLQKSI G CS IEAA+RVGEELVKAC Sbjct: 68 TKPRLSVFCSAKQLYAMLVDDQNKRCLFYGSTLQKSIHGNNPCSAIEAAERVGEELVKAC 127 Query: 669 IDLKINEITSYDRNGFSRGEKMQAFEIALSKHGFMPR 779 ID +INEI+SYDRNGF+RGE+MQAFEIA+S+HGF+PR Sbjct: 128 IDHQINEISSYDRNGFARGERMQAFEIAISRHGFLPR 164 >ref|XP_002276553.1| PREDICTED: 50S ribosomal protein L18-like [Vitis vinifera] Length = 177 Score = 219 bits (558), Expect = 9e-55 Identities = 106/157 (67%), Positives = 130/157 (82%) Frame = +3 Query: 309 SLQLKTSGLFQPLPNPFNSHPLHHRNLSFKPLVVKARANTRQESAKVRNRRLQKKFNGSP 488 +LQ K+SGLF N + + N K +V++ARAN +++SAK+RNRRLQ+KFNGSP Sbjct: 21 TLQFKSSGLFGTHSNSISFLSMPITNSFTKAMVIEARANAKKDSAKIRNRRLQRKFNGSP 80 Query: 489 VRPRISVFCSAKQLYVTLVDDQNKKCLFYGNTLQKSIRGEPSCSTIEAAQRVGEELVKAC 668 +PR+SVFCSAKQLY LVDDQNK+CLFYG+TLQKSI G CS IEAA+RVGEELVKAC Sbjct: 81 TKPRLSVFCSAKQLYAMLVDDQNKRCLFYGSTLQKSIHGNNPCSAIEAAERVGEELVKAC 140 Query: 669 IDLKINEITSYDRNGFSRGEKMQAFEIALSKHGFMPR 779 ID +INEI+SYDRNGF+RGE+MQAFEIA+S+HGF+PR Sbjct: 141 IDHQINEISSYDRNGFARGERMQAFEIAISRHGFLPR 177 >ref|XP_004135173.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Cucumis sativus] gi|449478396|ref|XP_004155307.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Cucumis sativus] Length = 180 Score = 211 bits (538), Expect = 2e-52 Identities = 104/157 (66%), Positives = 126/157 (80%) Frame = +3 Query: 303 VSSLQLKTSGLFQPLPNPFNSHPLHHRNLSFKPLVVKARANTRQESAKVRNRRLQKKFNG 482 VS L LKTS F PF+ L ++ KPL ++AR N++ ESAKVRNRR+QKK+NG Sbjct: 23 VSGLLLKTSMPFGLQSKPFDFRSLKTKHCDVKPLTIQARGNSKTESAKVRNRRMQKKYNG 82 Query: 483 SPVRPRISVFCSAKQLYVTLVDDQNKKCLFYGNTLQKSIRGEPSCSTIEAAQRVGEELVK 662 +P RPR+SVFCS KQLY LVDDQNKKCLFYG+TLQKS+R PSC+TIEAAQ VGEELVK Sbjct: 83 TPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPTPSCTTIEAAQHVGEELVK 142 Query: 663 ACIDLKINEITSYDRNGFSRGEKMQAFEIALSKHGFM 773 C+DL I+EI+ YDRNGF+ GEKMQAFEIA+S++GF+ Sbjct: 143 VCMDLNIHEISLYDRNGFACGEKMQAFEIAISRYGFL 179 >ref|XP_002312248.1| predicted protein [Populus trichocarpa] gi|222852068|gb|EEE89615.1| predicted protein [Populus trichocarpa] Length = 165 Score = 209 bits (531), Expect = 1e-51 Identities = 103/158 (65%), Positives = 124/158 (78%) Frame = +3 Query: 306 SSLQLKTSGLFQPLPNPFNSHPLHHRNLSFKPLVVKARANTRQESAKVRNRRLQKKFNGS 485 S+L KT +F PFN P+ RN K LV K RANTR ESAK+RNRR KKFNG+ Sbjct: 8 SALPFKTCDVFGNPLKPFNFLPIQTRNFQTKTLVAKRRANTRTESAKIRNRRTLKKFNGT 67 Query: 486 PVRPRISVFCSAKQLYVTLVDDQNKKCLFYGNTLQKSIRGEPSCSTIEAAQRVGEELVKA 665 +PR+SVFCS KQLY LVDDQ+KKCLFYG+TLQK + G+ STIEAA+ +GEEL+KA Sbjct: 68 RTKPRLSVFCSTKQLYAMLVDDQSKKCLFYGSTLQKPLSGDLPRSTIEAAECLGEELIKA 127 Query: 666 CIDLKINEITSYDRNGFSRGEKMQAFEIALSKHGFMPR 779 C+DLKINEI+SYDRNGF+ GE+MQAFEIA+S+HGF+PR Sbjct: 128 CMDLKINEISSYDRNGFAGGERMQAFEIAISRHGFLPR 165 >ref|XP_003613814.1| 50S ribosomal protein L18 [Medicago truncatula] gi|355515149|gb|AES96772.1| 50S ribosomal protein L18 [Medicago truncatula] Length = 189 Score = 206 bits (523), Expect = 1e-50 Identities = 101/153 (66%), Positives = 117/153 (76%) Frame = +3 Query: 315 QLKTSGLFQPLPNPFNSHPLHHRNLSFKPLVVKARANTRQESAKVRNRRLQKKFNGSPVR 494 Q TS F +P PF S +L K LV KA+AN R+ESAK+RNR++QKKFNG+ Sbjct: 12 QFNTSSFFGVIPKPFISFQPQTTSLIKKSLVTKAKANARKESAKIRNRKMQKKFNGTATH 71 Query: 495 PRISVFCSAKQLYVTLVDDQNKKCLFYGNTLQKSIRGEPSCSTIEAAQRVGEELVKACID 674 PR+SVFCS KQLY LVDDQNKKCLFYG+TLQK R P CSTIEAAQRVGE LVKAC+D Sbjct: 72 PRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKLFRENPPCSTIEAAQRVGEALVKACVD 131 Query: 675 LKINEITSYDRNGFSRGEKMQAFEIALSKHGFM 773 L INEI+SYDRNGF RGE++ AFEIA+S GF+ Sbjct: 132 LNINEISSYDRNGFGRGERLNAFEIAISNFGFL 164