BLASTX nr result

ID: Cimicifuga21_contig00021184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021184
         (1034 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23877.3| unnamed protein product [Vitis vinifera]              219   9e-55
ref|XP_002276553.1| PREDICTED: 50S ribosomal protein L18-like [V...   219   9e-55
ref|XP_004135173.1| PREDICTED: 50S ribosomal protein L18, chloro...   211   2e-52
ref|XP_002312248.1| predicted protein [Populus trichocarpa] gi|2...   209   1e-51
ref|XP_003613814.1| 50S ribosomal protein L18 [Medicago truncatu...   206   1e-50

>emb|CBI23877.3| unnamed protein product [Vitis vinifera]
          Length = 164

 Score =  219 bits (558), Expect = 9e-55
 Identities = 106/157 (67%), Positives = 130/157 (82%)
 Frame = +3

Query: 309 SLQLKTSGLFQPLPNPFNSHPLHHRNLSFKPLVVKARANTRQESAKVRNRRLQKKFNGSP 488
           +LQ K+SGLF    N  +   +   N   K +V++ARAN +++SAK+RNRRLQ+KFNGSP
Sbjct: 8   TLQFKSSGLFGTHSNSISFLSMPITNSFTKAMVIEARANAKKDSAKIRNRRLQRKFNGSP 67

Query: 489 VRPRISVFCSAKQLYVTLVDDQNKKCLFYGNTLQKSIRGEPSCSTIEAAQRVGEELVKAC 668
            +PR+SVFCSAKQLY  LVDDQNK+CLFYG+TLQKSI G   CS IEAA+RVGEELVKAC
Sbjct: 68  TKPRLSVFCSAKQLYAMLVDDQNKRCLFYGSTLQKSIHGNNPCSAIEAAERVGEELVKAC 127

Query: 669 IDLKINEITSYDRNGFSRGEKMQAFEIALSKHGFMPR 779
           ID +INEI+SYDRNGF+RGE+MQAFEIA+S+HGF+PR
Sbjct: 128 IDHQINEISSYDRNGFARGERMQAFEIAISRHGFLPR 164


>ref|XP_002276553.1| PREDICTED: 50S ribosomal protein L18-like [Vitis vinifera]
          Length = 177

 Score =  219 bits (558), Expect = 9e-55
 Identities = 106/157 (67%), Positives = 130/157 (82%)
 Frame = +3

Query: 309 SLQLKTSGLFQPLPNPFNSHPLHHRNLSFKPLVVKARANTRQESAKVRNRRLQKKFNGSP 488
           +LQ K+SGLF    N  +   +   N   K +V++ARAN +++SAK+RNRRLQ+KFNGSP
Sbjct: 21  TLQFKSSGLFGTHSNSISFLSMPITNSFTKAMVIEARANAKKDSAKIRNRRLQRKFNGSP 80

Query: 489 VRPRISVFCSAKQLYVTLVDDQNKKCLFYGNTLQKSIRGEPSCSTIEAAQRVGEELVKAC 668
            +PR+SVFCSAKQLY  LVDDQNK+CLFYG+TLQKSI G   CS IEAA+RVGEELVKAC
Sbjct: 81  TKPRLSVFCSAKQLYAMLVDDQNKRCLFYGSTLQKSIHGNNPCSAIEAAERVGEELVKAC 140

Query: 669 IDLKINEITSYDRNGFSRGEKMQAFEIALSKHGFMPR 779
           ID +INEI+SYDRNGF+RGE+MQAFEIA+S+HGF+PR
Sbjct: 141 IDHQINEISSYDRNGFARGERMQAFEIAISRHGFLPR 177


>ref|XP_004135173.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Cucumis
           sativus] gi|449478396|ref|XP_004155307.1| PREDICTED: 50S
           ribosomal protein L18, chloroplastic-like [Cucumis
           sativus]
          Length = 180

 Score =  211 bits (538), Expect = 2e-52
 Identities = 104/157 (66%), Positives = 126/157 (80%)
 Frame = +3

Query: 303 VSSLQLKTSGLFQPLPNPFNSHPLHHRNLSFKPLVVKARANTRQESAKVRNRRLQKKFNG 482
           VS L LKTS  F     PF+   L  ++   KPL ++AR N++ ESAKVRNRR+QKK+NG
Sbjct: 23  VSGLLLKTSMPFGLQSKPFDFRSLKTKHCDVKPLTIQARGNSKTESAKVRNRRMQKKYNG 82

Query: 483 SPVRPRISVFCSAKQLYVTLVDDQNKKCLFYGNTLQKSIRGEPSCSTIEAAQRVGEELVK 662
           +P RPR+SVFCS KQLY  LVDDQNKKCLFYG+TLQKS+R  PSC+TIEAAQ VGEELVK
Sbjct: 83  TPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMRPTPSCTTIEAAQHVGEELVK 142

Query: 663 ACIDLKINEITSYDRNGFSRGEKMQAFEIALSKHGFM 773
            C+DL I+EI+ YDRNGF+ GEKMQAFEIA+S++GF+
Sbjct: 143 VCMDLNIHEISLYDRNGFACGEKMQAFEIAISRYGFL 179


>ref|XP_002312248.1| predicted protein [Populus trichocarpa] gi|222852068|gb|EEE89615.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  209 bits (531), Expect = 1e-51
 Identities = 103/158 (65%), Positives = 124/158 (78%)
 Frame = +3

Query: 306 SSLQLKTSGLFQPLPNPFNSHPLHHRNLSFKPLVVKARANTRQESAKVRNRRLQKKFNGS 485
           S+L  KT  +F     PFN  P+  RN   K LV K RANTR ESAK+RNRR  KKFNG+
Sbjct: 8   SALPFKTCDVFGNPLKPFNFLPIQTRNFQTKTLVAKRRANTRTESAKIRNRRTLKKFNGT 67

Query: 486 PVRPRISVFCSAKQLYVTLVDDQNKKCLFYGNTLQKSIRGEPSCSTIEAAQRVGEELVKA 665
             +PR+SVFCS KQLY  LVDDQ+KKCLFYG+TLQK + G+   STIEAA+ +GEEL+KA
Sbjct: 68  RTKPRLSVFCSTKQLYAMLVDDQSKKCLFYGSTLQKPLSGDLPRSTIEAAECLGEELIKA 127

Query: 666 CIDLKINEITSYDRNGFSRGEKMQAFEIALSKHGFMPR 779
           C+DLKINEI+SYDRNGF+ GE+MQAFEIA+S+HGF+PR
Sbjct: 128 CMDLKINEISSYDRNGFAGGERMQAFEIAISRHGFLPR 165


>ref|XP_003613814.1| 50S ribosomal protein L18 [Medicago truncatula]
           gi|355515149|gb|AES96772.1| 50S ribosomal protein L18
           [Medicago truncatula]
          Length = 189

 Score =  206 bits (523), Expect = 1e-50
 Identities = 101/153 (66%), Positives = 117/153 (76%)
 Frame = +3

Query: 315 QLKTSGLFQPLPNPFNSHPLHHRNLSFKPLVVKARANTRQESAKVRNRRLQKKFNGSPVR 494
           Q  TS  F  +P PF S      +L  K LV KA+AN R+ESAK+RNR++QKKFNG+   
Sbjct: 12  QFNTSSFFGVIPKPFISFQPQTTSLIKKSLVTKAKANARKESAKIRNRKMQKKFNGTATH 71

Query: 495 PRISVFCSAKQLYVTLVDDQNKKCLFYGNTLQKSIRGEPSCSTIEAAQRVGEELVKACID 674
           PR+SVFCS KQLY  LVDDQNKKCLFYG+TLQK  R  P CSTIEAAQRVGE LVKAC+D
Sbjct: 72  PRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKLFRENPPCSTIEAAQRVGEALVKACVD 131

Query: 675 LKINEITSYDRNGFSRGEKMQAFEIALSKHGFM 773
           L INEI+SYDRNGF RGE++ AFEIA+S  GF+
Sbjct: 132 LNINEISSYDRNGFGRGERLNAFEIAISNFGFL 164


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