BLASTX nr result

ID: Cimicifuga21_contig00021172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021172
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270114.1| PREDICTED: uncharacterized protein LOC100256...   115   1e-23
ref|XP_002316817.1| predicted protein [Populus trichocarpa] gi|2...    97   5e-18
ref|XP_002522235.1| conserved hypothetical protein [Ricinus comm...    84   5e-14
ref|XP_002305062.1| predicted protein [Populus trichocarpa] gi|2...    81   2e-13

>ref|XP_002270114.1| PREDICTED: uncharacterized protein LOC100256599 [Vitis vinifera]
           gi|297740528|emb|CBI30710.3| unnamed protein product
           [Vitis vinifera]
          Length = 262

 Score =  115 bits (287), Expect = 1e-23
 Identities = 84/198 (42%), Positives = 106/198 (53%), Gaps = 13/198 (6%)
 Frame = -2

Query: 757 TTWSIRCEGNRKGRP-RRNTGSGGT---DKETGXXXXXXXXXXXXXQEEIIALFRRIQLS 590
           T  SI+ +GNR+GRP R+N  SG T   DK                Q+EIIALFRRIQ S
Sbjct: 52  TISSIKSDGNRRGRPPRKNHISGRTEKGDKNKTPPSSDGKLSESSNQDEIIALFRRIQSS 111

Query: 589 IANDGESTSPRKRVSDNRKERKSAESVLDVLLQSTKQI------REENKVLPKRRGVPKT 428
           I+  GES   +KR+SD+  ++ SAESVL++L QS KQ+      +E  +VL +RRGVPK 
Sbjct: 112 ISK-GESLGTKKRISDSSVDKTSAESVLEILRQSRKQVKGRPSKKEGGQVLTQRRGVPKK 170

Query: 427 KRETEDIPSTPDFNLSRPPSNFXXXXXXXXXXXXKXXXXXXXXXXXXXPI---ELHGIEE 257
            +   D     D   +RPPSNF            +                  EL  +EE
Sbjct: 171 DQGIPDKQYVADLKSARPPSNFVKRSPIPSPTNPRGKAVKLKNEVSVRTTSFNELPKVEE 230

Query: 256 MKVSELKELAKSRGIKRY 203
           MKV+ELKELAKSRGIK Y
Sbjct: 231 MKVTELKELAKSRGIKGY 248


>ref|XP_002316817.1| predicted protein [Populus trichocarpa] gi|222859882|gb|EEE97429.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 78/218 (35%), Positives = 111/218 (50%), Gaps = 17/218 (7%)
 Frame = -2

Query: 805 EITDSAPHVTSQS--LHSTTWSIRCEGNRKGRP-RRNTGSGGTDKE---TGXXXXXXXXX 644
           EI D +    S +  L  +  SI+ +G+ KGRP R+++  G T+KE   +          
Sbjct: 35  EIADGSLAFASHNGVLQFSVSSIKSDGSSKGRPPRKSSAPGRTEKEDEDSKSQSSDRKQP 94

Query: 643 XXXXQEEIIALFRRIQLSIANDGESTSPRKRVSDNRKERKSAESVLDVLLQSTKQ----- 479
               Q EI+ALFRRIQ SI+  GEST+ +K+ +    E     S+L+VL  STK      
Sbjct: 95  MSSNQAEIMALFRRIQSSISK-GESTATKKKKASRSNENSPTNSILEVLRHSTKHAKGPS 153

Query: 478 -IREENKVLPKRRGVPKTKRETEDIPSTPDFNLSRPPSNF-----XXXXXXXXXXXXKXX 317
            +RE NKVL ++R V K ++ T+   +  D  L+RPPSNF                 +  
Sbjct: 154 TVREGNKVLTQKRSVSKDQK-TQAEHALEDVKLTRPPSNFTKKSPIPSPSTSRENTTELN 212

Query: 316 XXXXXXXXXXXPIELHGIEEMKVSELKELAKSRGIKRY 203
                       +EL  +E+MK++ELKELAKSRGIK Y
Sbjct: 213 SEASEGKASNHKLELPRVEKMKLTELKELAKSRGIKGY 250


>ref|XP_002522235.1| conserved hypothetical protein [Ricinus communis]
           gi|223538488|gb|EEF40093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 289

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 66/193 (34%), Positives = 94/193 (48%), Gaps = 13/193 (6%)
 Frame = -2

Query: 742 RCEGNRKGRPRRNTGSGGT----DKETGXXXXXXXXXXXXXQEEIIALFRRIQLSIANDG 575
           + +G+R+GR  R + S G     DK                ++EIIALFRRI  SI+  G
Sbjct: 84  KSDGSRRGRSPRKSSSPGKRKKEDKSEKYQFSDGKLPRSPEKDEIIALFRRIHSSISK-G 142

Query: 574 ESTSPRKRVSDNRKERKSAESVLDVLLQSTKQI--REENKVLPKRRGVPK--TKRETEDI 407
           E+ S ++   +  +++   ES+L+ L QS K +  RE+++V  ++RGVPK   K +    
Sbjct: 143 EAKSTQQTDINFSEDKSPTESILEALRQSRKPVKGREQDRVSMQKRGVPKEGPKLQNNAQ 202

Query: 406 PSTPDFNLSRPPSNF-----XXXXXXXXXXXXKXXXXXXXXXXXXXPIELHGIEEMKVSE 242
                FN +RPPS F                 +              +EL  IEEMK+ E
Sbjct: 203 HMAAKFNFTRPPSKFIRRSPISSPSFPRGSPTELNNDPSASTESDKVLELPQIEEMKLPE 262

Query: 241 LKELAKSRGIKRY 203
           LKELAKSRGIK Y
Sbjct: 263 LKELAKSRGIKGY 275


>ref|XP_002305062.1| predicted protein [Populus trichocarpa] gi|222848026|gb|EEE85573.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 60/153 (39%), Positives = 80/153 (52%), Gaps = 11/153 (7%)
 Frame = -2

Query: 628 EEIIALFRRIQLSIANDGESTSPRKRVSDNRKERKSAESVLDVLLQSTKQIREENKVLPK 449
           EEI+ALFRRIQ SI+  GEST+  K+ +  R E+   +S+L+VLL+S KQ ++ N V  +
Sbjct: 63  EEIMALFRRIQYSISK-GESTATEKK-NAGRSEKSPTDSILEVLLRSRKQAKDTNTV-TE 119

Query: 448 RRGVPKTKRETEDIP------STPDFNLSRPPSNFXXXXXXXXXXXXKXXXXXXXXXXXX 287
            + VP  KR    +       +  DF L+RP SNF                         
Sbjct: 120 GKNVPTHKRSVPKVQKMQARNALADFKLTRPHSNFTKKFSIPSPSTPGEKNAELNSEASE 179

Query: 286 XPI-----ELHGIEEMKVSELKELAKSRGIKRY 203
                   EL  +EEMK++ELKELAKSRGIK Y
Sbjct: 180 AKASGSISELPRVEEMKLTELKELAKSRGIKGY 212


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