BLASTX nr result

ID: Cimicifuga21_contig00021120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021120
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002952428.1| hypothetical protein VOLCADRAFT_75353 [Volvo...   173   2e-41
ref|NP_198547.3| putative endomembrane protein 70 [Arabidopsis t...   172   3e-41
ref|XP_002870515.1| transporter [Arabidopsis lyrata subsp. lyrat...   172   3e-41
ref|XP_003531127.1| PREDICTED: putative phagocytic receptor 1b-l...   171   6e-41
ref|XP_003524839.1| PREDICTED: putative phagocytic receptor 1b-l...   171   6e-41

>ref|XP_002952428.1| hypothetical protein VOLCADRAFT_75353 [Volvox carteri f.
           nagariensis] gi|300262364|gb|EFJ46571.1| hypothetical
           protein VOLCADRAFT_75353 [Volvox carteri f. nagariensis]
          Length = 554

 Score =  173 bits (439), Expect = 2e-41
 Identities = 76/127 (59%), Positives = 95/127 (74%), Gaps = 1/127 (0%)
 Frame = +3

Query: 3   IQLHYLYSSMWGHRIFTVYSXXXXXXXXXXXXXXXXXXXXXYYQLSVEDHEWWWSSLLCG 182
           I+L+Y+++S+WGH+++T+YS                     Y+QL+VEDH WWW S LCG
Sbjct: 428 IELYYIFASIWGHKVYTIYSILFIVFIILIIVTAFITVALTYFQLAVEDHRWWWRSFLCG 487

Query: 183 GSTSIFMYSYCFIYY-VRSNMSGFMQLSFFFGYNACICYAFFLMLGSIGFYSSLLFVRHI 359
           GST IF+Y YCF YY VRS+MSGFMQ SFFFGYNA +CYAFFLMLG++GF +SLLFVRHI
Sbjct: 488 GSTGIFVYGYCFYYYYVRSDMSGFMQTSFFFGYNAVVCYAFFLMLGTVGFRASLLFVRHI 547

Query: 360 YRAVKLE 380
           YRA+K E
Sbjct: 548 YRAIKCE 554


>ref|NP_198547.3| putative endomembrane protein 70 [Arabidopsis thaliana]
           gi|9758717|dbj|BAB09103.1| endosomal protein-like
           [Arabidopsis thaliana] gi|110742157|dbj|BAE99006.1|
           multispanning membrane protein - like [Arabidopsis
           thaliana] gi|332006781|gb|AED94164.1| putative
           endomembrane protein 70 [Arabidopsis thaliana]
          Length = 593

 Score =  172 bits (437), Expect = 3e-41
 Identities = 76/127 (59%), Positives = 95/127 (74%), Gaps = 1/127 (0%)
 Frame = +3

Query: 3   IQLHYLYSSMWGHRIFTVYSXXXXXXXXXXXXXXXXXXXXXYYQLSVEDHEWWWSSLLCG 182
           I+L+Y+++S+WGHRI+T+YS                     Y+QL+ EDHEWWW SLLCG
Sbjct: 467 IELYYIFASVWGHRIYTIYSILSIVFLILVIVTAFITVALTYFQLAAEDHEWWWRSLLCG 526

Query: 183 GSTSIFMYSYC-FIYYVRSNMSGFMQLSFFFGYNACICYAFFLMLGSIGFYSSLLFVRHI 359
           GST +F+Y+YC + YY RS+MSGFMQ SFFFGY ACICY FFLMLG+IGF +SLLFVRHI
Sbjct: 527 GSTGLFIYAYCLYYYYARSDMSGFMQTSFFFGYMACICYGFFLMLGTIGFCASLLFVRHI 586

Query: 360 YRAVKLE 380
           YR++K E
Sbjct: 587 YRSIKCE 593


>ref|XP_002870515.1| transporter [Arabidopsis lyrata subsp. lyrata]
           gi|297316351|gb|EFH46774.1| transporter [Arabidopsis
           lyrata subsp. lyrata]
          Length = 593

 Score =  172 bits (437), Expect = 3e-41
 Identities = 76/127 (59%), Positives = 95/127 (74%), Gaps = 1/127 (0%)
 Frame = +3

Query: 3   IQLHYLYSSMWGHRIFTVYSXXXXXXXXXXXXXXXXXXXXXYYQLSVEDHEWWWSSLLCG 182
           I+L+Y+++S+WGHRI+T+YS                     Y+QL+ EDHEWWW SLLCG
Sbjct: 467 IELYYIFASVWGHRIYTIYSILSIVFLILVIVTAFITVALTYFQLAAEDHEWWWRSLLCG 526

Query: 183 GSTSIFMYSYC-FIYYVRSNMSGFMQLSFFFGYNACICYAFFLMLGSIGFYSSLLFVRHI 359
           GST +F+Y+YC + YY RS+MSGFMQ SFFFGY ACICY FFLMLG+IGF +SLLFVRHI
Sbjct: 527 GSTGLFIYAYCLYYYYARSDMSGFMQTSFFFGYMACICYGFFLMLGAIGFRASLLFVRHI 586

Query: 360 YRAVKLE 380
           YR++K E
Sbjct: 587 YRSIKCE 593


>ref|XP_003531127.1| PREDICTED: putative phagocytic receptor 1b-like [Glycine max]
          Length = 604

 Score =  171 bits (434), Expect = 6e-41
 Identities = 75/127 (59%), Positives = 93/127 (73%), Gaps = 1/127 (0%)
 Frame = +3

Query: 3   IQLHYLYSSMWGHRIFTVYSXXXXXXXXXXXXXXXXXXXXXYYQLSVEDHEWWWSSLLCG 182
           I+L+Y+++S+WGHRI+T+YS                     Y+QL+ EDHEWWW S LCG
Sbjct: 478 IELYYIFASVWGHRIYTIYSILFIVFIILLIVTAFITVALTYFQLAAEDHEWWWRSFLCG 537

Query: 183 GSTSIFMYSYC-FIYYVRSNMSGFMQLSFFFGYNACICYAFFLMLGSIGFYSSLLFVRHI 359
           GST +F+Y YC + YY RS+MSGFMQ SFFFGY ACICY FFLMLGS+GF +SLLFVRHI
Sbjct: 538 GSTGLFIYGYCLYYYYARSDMSGFMQTSFFFGYMACICYGFFLMLGSVGFRASLLFVRHI 597

Query: 360 YRAVKLE 380
           YR++K E
Sbjct: 598 YRSIKCE 604


>ref|XP_003524839.1| PREDICTED: putative phagocytic receptor 1b-like [Glycine max]
          Length = 601

 Score =  171 bits (434), Expect = 6e-41
 Identities = 75/127 (59%), Positives = 93/127 (73%), Gaps = 1/127 (0%)
 Frame = +3

Query: 3   IQLHYLYSSMWGHRIFTVYSXXXXXXXXXXXXXXXXXXXXXYYQLSVEDHEWWWSSLLCG 182
           I+L+Y+++S+WGHRI+T+YS                     Y+QL+ EDHEWWW S LCG
Sbjct: 475 IELYYIFASVWGHRIYTIYSILFIVFIILLIVTAFITVALTYFQLAAEDHEWWWRSFLCG 534

Query: 183 GSTSIFMYSYC-FIYYVRSNMSGFMQLSFFFGYNACICYAFFLMLGSIGFYSSLLFVRHI 359
           GST +F+Y YC + YY RS+MSGFMQ SFFFGY ACICY FFLMLGS+GF +SLLFVRHI
Sbjct: 535 GSTGLFIYGYCLYYYYARSDMSGFMQTSFFFGYMACICYGFFLMLGSVGFRASLLFVRHI 594

Query: 360 YRAVKLE 380
           YR++K E
Sbjct: 595 YRSIKCE 601


Top