BLASTX nr result
ID: Cimicifuga21_contig00021115
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00021115 (431 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|2... 64 2e-08 ref|XP_002512931.1| conserved hypothetical protein [Ricinus comm... 61 1e-07 ref|XP_003623407.1| F-box/kelch-repeat protein [Medicago truncat... 60 2e-07 ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|2... 58 7e-07 ref|XP_003605337.1| F-box protein [Medicago truncatula] gi|35550... 57 2e-06 >ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|222854764|gb|EEE92311.1| predicted protein [Populus trichocarpa] Length = 400 Score = 63.5 bits (153), Expect = 2e-08 Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 4/100 (4%) Frame = +2 Query: 122 MPEDVGFQILLWLPVISLLRFKSVCKSCCALIENSTFVNQHLLHN---GNNTNLIVKDYD 292 +P +V ILL LPV SL+RF+S+ K C+LI+ F+N HL H+ +N ++I+K++D Sbjct: 4 IPHEVIHDILLQLPVKSLVRFRSLSKPICSLIDGPNFINLHLNHSITTKSNHSIILKEWD 63 Query: 293 QFVMLSGHKFDYTVPIDFH-WYPGNDVRIMNSINGIVCLR 409 F + D V + H Y G ++ S+NG+V LR Sbjct: 64 LFAVDFDALSD-AVEVKHHPLYSGGGTEVIGSVNGLVFLR 102 >ref|XP_002512931.1| conserved hypothetical protein [Ricinus communis] gi|223547942|gb|EEF49434.1| conserved hypothetical protein [Ricinus communis] Length = 386 Score = 60.8 bits (146), Expect = 1e-07 Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 20/116 (17%) Frame = +2 Query: 122 MPEDVGFQILLWLPVISLLRFKSVCKSCCALIENSTFVNQHLLHNGNNTN-------LIV 280 +PED+ +ILL LP++ L+RF+ VCKS CAL+ + F+ + LL NG + N ++V Sbjct: 5 LPEDLIIKILLRLPMLYLVRFRCVCKSWCALLSDPKFIYKKLLCNGEHQNYDNSPHPVVV 64 Query: 281 KDYDQ------FVMLSGHKFDYTVPIDFHWYPG------NDVRIM-NSINGIVCLR 409 K D F +LS F+ + P + YP +D+ I+ +S NG +CLR Sbjct: 65 KRRDMSTRNYFFSVLSCETFEMSAPKEIP-YPKDIMENMSDISIVGSSSNGFICLR 119 >ref|XP_003623407.1| F-box/kelch-repeat protein [Medicago truncatula] gi|355498422|gb|AES79625.1| F-box/kelch-repeat protein [Medicago truncatula] Length = 373 Score = 60.1 bits (144), Expect = 2e-07 Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 4/97 (4%) Frame = +2 Query: 128 EDVGFQILLWLPVISLLRFKSVCKSCCALIENSTFVNQHLLHNGNNTNLIVKDYD---QF 298 ED+ +I L LP+ SLLRF+ + KS +LI N TFV H+ + NTNL+ K +D F Sbjct: 9 EDIAIEIFLRLPLKSLLRFQCLSKSFESLISNPTFVKYHVQRSQKNTNLLFKFHDYYRSF 68 Query: 299 VMLSGHKFDYTV-PIDFHWYPGNDVRIMNSINGIVCL 406 M++ V DF + +++ S NG+VCL Sbjct: 69 SMVNDKSLSTIVEDFDFGSRLKSKYKVVGSCNGLVCL 105 >ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|222867152|gb|EEF04283.1| predicted protein [Populus trichocarpa] Length = 419 Score = 58.2 bits (139), Expect = 7e-07 Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 4/101 (3%) Frame = +2 Query: 122 MPEDVGFQILLWLPVISLLRFKSVCKSCCALIENSTFVNQHLLHN---GNNTNLIVKDYD 292 +P ++ I LPV SLLRF+S+ K C+LI+ F+ HL H+ +N ++I+K++D Sbjct: 4 IPHEIITDIFQQLPVKSLLRFRSLSKPICSLIDGPDFIKFHLYHSITAKSNHSVILKEWD 63 Query: 293 QFVMLSGHKFDYTVPIDFH-WYPGNDVRIMNSINGIVCLRH 412 F + D V + H Y ++ S+NG+V LRH Sbjct: 64 LFTVDFDTLSD-AVEVKHHPLYAAGGTEVIGSVNGLVFLRH 103 >ref|XP_003605337.1| F-box protein [Medicago truncatula] gi|355506392|gb|AES87534.1| F-box protein [Medicago truncatula] Length = 400 Score = 57.0 bits (136), Expect = 2e-06 Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 18/113 (15%) Frame = +2 Query: 122 MPEDVGFQILLWLPVISLLRFKSVCKSCCALIENSTFVN---QHLLHNG------NNTNL 274 +P+D+ F IL LP+ S RF+ CK L EN +F+N +LL N + T+L Sbjct: 16 IPDDIAFSILSKLPLKSFKRFECFCKPWSLLSENRSFMNTFCNNLLFNSHRCPYYDGTSL 75 Query: 275 IVKDY----DQFVMLSGHKFDYTVPIDF-HWYPGNDVRI----MNSINGIVCL 406 +++D+ D F +SG +F+ V IDF + Y N + SING CL Sbjct: 76 LLRDFKLGQDVFYSISGERFENKVKIDFPNSYDANRFKFRIFGFGSINGTFCL 128