BLASTX nr result
ID: Cimicifuga21_contig00021094
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00021094
(363 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera] 129 9e-34
ref|XP_002533428.1| serine-threonine protein kinase, plant-type,... 124 1e-32
ref|XP_003551548.1| PREDICTED: probable LRR receptor-like serine... 123 6e-32
ref|XP_002533985.1| serine-threonine protein kinase, plant-type,... 130 1e-31
ref|XP_002311067.1| predicted protein [Populus trichocarpa] gi|2... 119 4e-31
>emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]
Length = 1904
Score = 129 bits (325), Expect(2) = 9e-34
Identities = 64/94 (68%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
Frame = +1
Query: 85 QSFLAECEILRKARHRNLLKILTVCSSVDFLGNDFKALVFEFMSNGSLEDLLHNGLDRSQ 264
+SF+AECE LR RHRNL+KI+T CSSVDF GNDFKALV+E+M NGSLE LH +
Sbjct: 1688 KSFMAECEALRNIRHRNLVKIITACSSVDFXGNDFKALVYEYMPNGSLETWLHQFVPEGN 1747
Query: 265 SQ-SRNLNLLDRLNIAIDVASALDYLHNYCQNPI 363
+ R+LNLL RLNIAIDV SALDYLHN CQ+PI
Sbjct: 1748 AHGQRSLNLLQRLNIAIDVGSALDYLHNQCQDPI 1781
Score = 38.9 bits (89), Expect(2) = 9e-34
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +2
Query: 2 GSVYKGVFHKDGSIVAVKVFNLTARGA 82
GSVYKG+ H + ++ AVKVFNL RGA
Sbjct: 1660 GSVYKGILHPNETVXAVKVFNLQNRGA 1686
Score = 121 bits (303), Expect = 7e-26
Identities = 65/104 (62%), Positives = 75/104 (72%), Gaps = 2/104 (1%)
Frame = +1
Query: 58 IQPHG*RSFQSFLAECEILRKARHRNLLKILTVCSSVDFLGNDFKALVFEFMSNGSLEDL 237
IQ H + +SF AECE LR RHRNL+K+LT CSSVD+ GNDFKALV+EFM NGSLE+
Sbjct: 775 IQLHQRGAVKSFKAECEALRNIRHRNLVKVLTTCSSVDYQGNDFKALVYEFMPNGSLENW 834
Query: 238 LH--NGLDRSQSQSRNLNLLDRLNIAIDVASALDYLHNYCQNPI 363
LH D R L+L RLNIAIDVASALDYLH++C PI
Sbjct: 835 LHPVPTPDEINDVLRILSLPQRLNIAIDVASALDYLHHHCHKPI 878
>ref|XP_002533428.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis] gi|223526716|gb|EEF28948.1| serine-threonine
protein kinase, plant-type, putative [Ricinus communis]
Length = 963
Score = 124 bits (311), Expect(2) = 1e-32
Identities = 62/96 (64%), Positives = 76/96 (79%), Gaps = 2/96 (2%)
Frame = +1
Query: 82 FQSFLAECEILRKARHRNLLKILTVCSSVDFLGNDFKALVFEFMSNGSLEDLLHN--GLD 255
F+SFLAECE LR RHRNLLK+LT CSS+D+ GNDFKALV+EFM NGSLE+ LH +
Sbjct: 724 FKSFLAECEALRNIRHRNLLKVLTACSSLDYHGNDFKALVYEFMVNGSLEEWLHPPVATN 783
Query: 256 RSQSQSRNLNLLDRLNIAIDVASALDYLHNYCQNPI 363
++ ++R LN L RLNIAIDVASAL YLH++C+ I
Sbjct: 784 EAELETRKLNFLQRLNIAIDVASALYYLHHHCEPQI 819
Score = 40.8 bits (94), Expect(2) = 1e-32
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +2
Query: 2 GSVYKGVFHKDGSIVAVKVFNLTARGAFR 88
GSVYKG ++G+++AVKVFNL RG F+
Sbjct: 697 GSVYKGRLDREGTLIAVKVFNLMRRGGFK 725
>ref|XP_003551548.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
At3g47570-like [Glycine max]
Length = 1020
Score = 123 bits (309), Expect(2) = 6e-32
Identities = 60/93 (64%), Positives = 73/93 (78%)
Frame = +1
Query: 85 QSFLAECEILRKARHRNLLKILTVCSSVDFLGNDFKALVFEFMSNGSLEDLLHNGLDRSQ 264
+SF+ EC++LR RHRNLLKI+T SSVD GNDFKALVFEFM NGSLED LH +D Q
Sbjct: 737 KSFIDECQVLRSIRHRNLLKIITAISSVDHQGNDFKALVFEFMPNGSLEDWLH-PVDNQQ 795
Query: 265 SQSRNLNLLDRLNIAIDVASALDYLHNYCQNPI 363
Q++ L+ + RLNIAIDVA AL+YLH++C PI
Sbjct: 796 KQTKTLSFIQRLNIAIDVACALEYLHHFCHTPI 828
Score = 38.9 bits (89), Expect(2) = 6e-32
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = +2
Query: 2 GSVYKGVFHKDGSIVAVKVFNLTARGA 82
GSVYKG DGS VAVKV NL RGA
Sbjct: 709 GSVYKGTLSSDGSSVAVKVLNLEQRGA 735
>ref|XP_002533985.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis] gi|223526036|gb|EEF28405.1| serine-threonine
protein kinase, plant-type, putative [Ricinus communis]
Length = 936
Score = 130 bits (328), Expect(2) = 1e-31
Identities = 63/99 (63%), Positives = 77/99 (77%)
Frame = +1
Query: 67 HG*RSFQSFLAECEILRKARHRNLLKILTVCSSVDFLGNDFKALVFEFMSNGSLEDLLHN 246
HG +F+SF+AECE LR RHRNL+K+LT CSSVD+ GN+FKALV+EFM NGSLE+ LH
Sbjct: 666 HG--AFKSFIAECEALRNIRHRNLVKVLTACSSVDYQGNEFKALVYEFMVNGSLEEWLHP 723
Query: 247 GLDRSQSQSRNLNLLDRLNIAIDVASALDYLHNYCQNPI 363
+ NLN+L RLNIA+DVA ALDYLHN+C+ PI
Sbjct: 724 PDEAKAIPRNNLNILQRLNIAVDVACALDYLHNHCETPI 762
Score = 30.4 bits (67), Expect(2) = 1e-31
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 2 GSVYKGVFHKDGSIVAVKVFNLTARGAFR 88
G+V+KG + +AVKVFNL GAF+
Sbjct: 642 GTVFKGELGGGETSIAVKVFNLMRHGAFK 670
>ref|XP_002311067.1| predicted protein [Populus trichocarpa] gi|222850887|gb|EEE88434.1|
predicted protein [Populus trichocarpa]
Length = 1025
Score = 119 bits (299), Expect(2) = 4e-31
Identities = 59/91 (64%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
Frame = +1
Query: 85 QSFLAECEILRKARHRNLLKILTVCSSVDFLGNDFKALVFEFMSNGSLEDLLHNG-LDRS 261
+SF+AEC L RHRNL+K+LT CS +DF GNDFKALV+EFM NGSLE+ LH +
Sbjct: 747 KSFMAECAALINIRHRNLVKVLTACSGIDFQGNDFKALVYEFMVNGSLEEWLHPAQISDE 806
Query: 262 QSQSRNLNLLDRLNIAIDVASALDYLHNYCQ 354
+ R+L+LL RLNIAIDVASALDYLHN+CQ
Sbjct: 807 AHRRRDLSLLQRLNIAIDVASALDYLHNHCQ 837
Score = 40.0 bits (92), Expect(2) = 4e-31
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +2
Query: 2 GSVYKGVFHKDGSIVAVKVFNLTARGA 82
GSVYKG+ DG+ VAVKVFNL GA
Sbjct: 719 GSVYKGILRSDGAAVAVKVFNLLREGA 745