BLASTX nr result

ID: Cimicifuga21_contig00021092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021092
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   5e-07
gb|AAM08745.1|AC025098_12 Unknown protein [Oryza sativa Japonica...    57   2e-06
gb|EEC66515.1| hypothetical protein OsI_32632 [Oryza sativa Indi...    57   2e-06
gb|EAZ39347.1| hypothetical protein OsJ_23773 [Oryza sativa Japo...    57   2e-06
ref|XP_002447884.1| hypothetical protein SORBIDRAFT_06g017410 [S...    55   6e-06

>dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 384

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 23/42 (54%), Positives = 34/42 (80%)
 Frame = +1

Query: 139 DGIDRISGLPDSRLHHIMCFMDMKQVVQSSLISSRWRPLWKS 264
           +G+DR+S LPD  LHH+M F+ M +VV++SL+S RWR +W+S
Sbjct: 19  NGVDRLSSLPDDLLHHVMSFLPMPEVVRTSLLSPRWRFVWRS 60


>gb|AAM08745.1|AC025098_12 Unknown protein [Oryza sativa Japonica Group]
           gi|31429988|gb|AAP51965.1| F-box domain containing
           protein, expressed [Oryza sativa Japonica Group]
          Length = 949

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 23/40 (57%), Positives = 32/40 (80%)
 Frame = +1

Query: 145 IDRISGLPDSRLHHIMCFMDMKQVVQSSLISSRWRPLWKS 264
           +DRISGLPD  LHHIM F++ +Q VQ+ ++S RWR LW++
Sbjct: 89  MDRISGLPDKILHHIMSFLNTRQAVQTCVLSRRWRNLWRT 128


>gb|EEC66515.1| hypothetical protein OsI_32632 [Oryza sativa Indica Group]
          Length = 492

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 23/40 (57%), Positives = 32/40 (80%)
 Frame = +1

Query: 145 IDRISGLPDSRLHHIMCFMDMKQVVQSSLISSRWRPLWKS 264
           +DRISGLPD  LHHIM F++ +Q VQ+ ++S RWR LW++
Sbjct: 89  MDRISGLPDKILHHIMSFLNARQAVQTCVLSRRWRNLWRT 128


>gb|EAZ39347.1| hypothetical protein OsJ_23773 [Oryza sativa Japonica Group]
          Length = 941

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 23/40 (57%), Positives = 32/40 (80%)
 Frame = +1

Query: 145 IDRISGLPDSRLHHIMCFMDMKQVVQSSLISSRWRPLWKS 264
           +DRISGLPD  LHHIM F++ +Q VQ+ ++S RWR LW++
Sbjct: 89  MDRISGLPDKILHHIMSFLNTRQAVQTCVLSRRWRNLWRT 128


>ref|XP_002447884.1| hypothetical protein SORBIDRAFT_06g017410 [Sorghum bicolor]
           gi|241939067|gb|EES12212.1| hypothetical protein
           SORBIDRAFT_06g017410 [Sorghum bicolor]
          Length = 426

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 22/39 (56%), Positives = 31/39 (79%)
 Frame = +1

Query: 148 DRISGLPDSRLHHIMCFMDMKQVVQSSLISSRWRPLWKS 264
           DR+S LPD  +HHIM F+  +QVVQ+ ++S+RWR LW+S
Sbjct: 24  DRLSSLPDCLIHHIMSFLKARQVVQTCVLSTRWRHLWRS 62


Top