BLASTX nr result

ID: Cimicifuga21_contig00021089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021089
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518488.1| PREDICTED: GTP-binding protein At3g49725, ch...    87   1e-15
ref|XP_002263978.2| PREDICTED: GTP-binding protein At3g49725, ch...    84   9e-15
emb|CAN74733.1| hypothetical protein VITISV_037839 [Vitis vinifera]    84   9e-15
emb|CBI18834.3| unnamed protein product [Vitis vinifera]               82   3e-14
emb|CBI25886.3| unnamed protein product [Vitis vinifera]               76   2e-12

>ref|XP_003518488.1| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like
           [Glycine max]
          Length = 594

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 58/131 (44%), Positives = 75/131 (57%), Gaps = 16/131 (12%)
 Frame = -3

Query: 402 NVDGEESESAEEWKL--VDDQPDYSKGWKGLNDQQDED---------DPQGEKEFSDDVT 256
           ++ G E+E  +E     ++++ DYS GW   +D  DED         D Q E    D+  
Sbjct: 467 SISGAENEGIKEVDCEGMEEKEDYSDGWLYDDDLVDEDEFCSPSTVADQQNESYKKDNSV 526

Query: 255 INAESLGRDVQPVETSAVMGVGLQELLSLIDEKLNNQN-----VVERRISDTFSRKWRPP 91
           +   S+G+    V+TSAV GVGLQELL LID+KL+ QN     VVER I D   RKWRP 
Sbjct: 527 VKDGSIGQSGPHVKTSAVTGVGLQELLELIDKKLSVQNKKGARVVERSIYD---RKWRPS 583

Query: 90  RNADSGIAVEQ 58
            N +SGIAVEQ
Sbjct: 584 HNQESGIAVEQ 594


>ref|XP_002263978.2| PREDICTED: GTP-binding protein At3g49725, chloroplastic-like,
           partial [Vitis vinifera]
          Length = 555

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 8/130 (6%)
 Frame = -3

Query: 426 MSSEENQENVDGEESESAEEWKL------VDDQPDYSKGWKGLNDQQDEDDPQGEKEFSD 265
           +SS + QE +D  E + ++ W         DDQ + S+ WK ++DQQ E        F D
Sbjct: 437 LSSGDVQETMDDHEGDYSDGWLSRGGEGSEDDQGNPSR-WKTMDDQQSES-------FKD 488

Query: 264 DVTINAESLGRD--VQPVETSAVMGVGLQELLSLIDEKLNNQNVVERRISDTFSRKWRPP 91
                 +S  +   +  V+TSAVMGVGLQELL+LIDEKL  Q V ER   + F RKWRPP
Sbjct: 489 RRMTEKDSCSQPQCIPHVKTSAVMGVGLQELLALIDEKLETQKVPER---NYFDRKWRPP 545

Query: 90  RNADSGIAVE 61
              D G+AVE
Sbjct: 546 HTEDVGVAVE 555


>emb|CAN74733.1| hypothetical protein VITISV_037839 [Vitis vinifera]
          Length = 743

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 8/130 (6%)
 Frame = -3

Query: 426 MSSEENQENVDGEESESAEEWKL------VDDQPDYSKGWKGLNDQQDEDDPQGEKEFSD 265
           +SS + QE +D  E + ++ W         DDQ + S+ WK ++DQQ E        F D
Sbjct: 625 LSSGDVQETMDDHEGDYSDGWLSRGGEGSEDDQGNPSR-WKTMDDQQSES-------FKD 676

Query: 264 DVTINAESLGRD--VQPVETSAVMGVGLQELLSLIDEKLNNQNVVERRISDTFSRKWRPP 91
                 +S  +   +  V+TSAVMGVGLQELL+LIDEKL  Q V ER   + F RKWRPP
Sbjct: 677 RRMTEKDSCSQPQCIPHVKTSAVMGVGLQELLALIDEKLETQKVPER---NYFDRKWRPP 733

Query: 90  RNADSGIAVE 61
              D G+AVE
Sbjct: 734 HTEDVGVAVE 743


>emb|CBI18834.3| unnamed protein product [Vitis vinifera]
          Length = 212

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 53/129 (41%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
 Frame = -3

Query: 426 MSSEENQENVDGEESESAEEW-----KLVDDQPDYSKGWKGLNDQQDEDDPQGEKEFSDD 262
           +SS + QE +D  E + ++ W     +  +D       WK ++DQQ E        F D 
Sbjct: 94  LSSGDVQETMDDREGDYSDGWLSGGGEGSEDDQGSPPRWKTMDDQQSES-------FKDR 146

Query: 261 VTINAESLGRD--VQPVETSAVMGVGLQELLSLIDEKLNNQNVVERRISDTFSRKWRPPR 88
                +S  +   +  V+TSAVMGVGLQELL+LIDEKL  Q V ER   + F RKWRPP 
Sbjct: 147 RMTEKDSCSQPQCIPHVKTSAVMGVGLQELLALIDEKLETQKVPER---NYFDRKWRPPH 203

Query: 87  NADSGIAVE 61
             D G+AVE
Sbjct: 204 TEDVGVAVE 212


>emb|CBI25886.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 54/124 (43%), Positives = 68/124 (54%)
 Frame = -3

Query: 432 DVMSSEENQENVDGEESESAEEWKLVDDQPDYSKGWKGLNDQQDEDDPQGEKEFSDDVTI 253
           DV+ S    E+ D   SE   E    DD+ D        + Q+  DD +G+  +SDD   
Sbjct: 467 DVVDSLSGAED-DDMPSELPAEPVDDDDENDIVSELSSGDVQETMDDHEGD--YSDDSCS 523

Query: 252 NAESLGRDVQPVETSAVMGVGLQELLSLIDEKLNNQNVVERRISDTFSRKWRPPRNADSG 73
             + +      V+TSAVMGVGLQELL+LIDEKL  Q V ER   + F RKWRPP   D G
Sbjct: 524 QPQCIPH----VKTSAVMGVGLQELLALIDEKLETQKVPER---NYFDRKWRPPHTEDVG 576

Query: 72  IAVE 61
           +AVE
Sbjct: 577 VAVE 580


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