BLASTX nr result

ID: Cimicifuga21_contig00021058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021058
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543085.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   129   3e-28
ref|XP_004155654.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   128   4e-28
ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   128   4e-28
ref|XP_002305003.1| predicted protein [Populus trichocarpa] gi|2...   128   6e-28
ref|XP_003593448.1| Pre-mRNA-splicing factor SYF1 [Medicago trun...   127   1e-27

>ref|XP_003543085.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Glycine max]
          Length = 919

 Score =  129 bits (323), Expect = 3e-28
 Identities = 63/84 (75%), Positives = 70/84 (83%)
 Frame = +1

Query: 1   EQAIKSGLLEKDVKTICLKYAELENSLGETDRARAIYVFASHFADPRYVTDFWSKWFNFE 180
           EQAI+SGL +KDVKT+CLKYAELE SLGE DRAR I+VFAS FADPR   +FW+KW  FE
Sbjct: 688 EQAIESGLPDKDVKTMCLKYAELEKSLGEIDRARGIFVFASQFADPRSDPEFWNKWHEFE 747

Query: 181 VQHGNESSFAEMLRKKRSVLASYS 252
           VQHGNE +F EMLR KRSV ASYS
Sbjct: 748 VQHGNEDTFREMLRIKRSVSASYS 771


>ref|XP_004155654.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Cucumis sativus]
          Length = 650

 Score =  128 bits (322), Expect = 4e-28
 Identities = 63/84 (75%), Positives = 70/84 (83%)
 Frame = +1

Query: 1   EQAIKSGLLEKDVKTICLKYAELENSLGETDRARAIYVFASHFADPRYVTDFWSKWFNFE 180
           EQAI+SGL ++DVKT+CLKYAELE SLGE DRAR IYVFAS FADPR   +FW+KW  FE
Sbjct: 420 EQAIESGLPDQDVKTMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFE 479

Query: 181 VQHGNESSFAEMLRKKRSVLASYS 252
           VQHGNE +F EMLR KRSV ASYS
Sbjct: 480 VQHGNEDTFREMLRIKRSVSASYS 503


>ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Cucumis sativus]
          Length = 912

 Score =  128 bits (322), Expect = 4e-28
 Identities = 63/84 (75%), Positives = 70/84 (83%)
 Frame = +1

Query: 1   EQAIKSGLLEKDVKTICLKYAELENSLGETDRARAIYVFASHFADPRYVTDFWSKWFNFE 180
           EQAI+SGL ++DVKT+CLKYAELE SLGE DRAR IYVFAS FADPR   +FW+KW  FE
Sbjct: 686 EQAIESGLPDQDVKTMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFE 745

Query: 181 VQHGNESSFAEMLRKKRSVLASYS 252
           VQHGNE +F EMLR KRSV ASYS
Sbjct: 746 VQHGNEDTFREMLRIKRSVSASYS 769


>ref|XP_002305003.1| predicted protein [Populus trichocarpa] gi|222847967|gb|EEE85514.1|
           predicted protein [Populus trichocarpa]
          Length = 908

 Score =  128 bits (321), Expect = 6e-28
 Identities = 62/84 (73%), Positives = 70/84 (83%)
 Frame = +1

Query: 1   EQAIKSGLLEKDVKTICLKYAELENSLGETDRARAIYVFASHFADPRYVTDFWSKWFNFE 180
           EQAI+SGL +KDVKT+CLKYA+LE +LGE DRAR IYVFAS FADPR   DFW++W  FE
Sbjct: 681 EQAIESGLPDKDVKTMCLKYADLEKNLGEIDRARGIYVFASQFADPRSDLDFWNQWHEFE 740

Query: 181 VQHGNESSFAEMLRKKRSVLASYS 252
           VQHGNE +F EMLR KRSV ASYS
Sbjct: 741 VQHGNEDTFREMLRIKRSVSASYS 764


>ref|XP_003593448.1| Pre-mRNA-splicing factor SYF1 [Medicago truncatula]
           gi|355482496|gb|AES63699.1| Pre-mRNA-splicing factor
           SYF1 [Medicago truncatula]
          Length = 925

 Score =  127 bits (319), Expect = 1e-27
 Identities = 62/84 (73%), Positives = 69/84 (82%)
 Frame = +1

Query: 1   EQAIKSGLLEKDVKTICLKYAELENSLGETDRARAIYVFASHFADPRYVTDFWSKWFNFE 180
           EQAI+SGL +KDVKT+CLKYAELE SLGE +RAR +YVFAS FADPR   DFW+ W  FE
Sbjct: 696 EQAIESGLPDKDVKTMCLKYAELERSLGEIERARGVYVFASKFADPRSDPDFWNDWHEFE 755

Query: 181 VQHGNESSFAEMLRKKRSVLASYS 252
           VQHGNE +F EMLR KRSV ASYS
Sbjct: 756 VQHGNEDTFREMLRIKRSVSASYS 779


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