BLASTX nr result

ID: Cimicifuga21_contig00021057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021057
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269512.2| PREDICTED: pentatricopeptide repeat-containi...   186   1e-45
emb|CBI30774.3| unnamed protein product [Vitis vinifera]              186   1e-45
ref|XP_002316747.1| predicted protein [Populus trichocarpa] gi|2...   182   3e-44
gb|ACO76262.1| At4g18975-like protein [Capsella grandiflora] gi|...   178   5e-43
gb|ACO76260.1| At4g18975-like protein [Capsella grandiflora] gi|...   178   5e-43

>ref|XP_002269512.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
           chloroplastic-like [Vitis vinifera]
          Length = 216

 Score =  186 bits (473), Expect = 1e-45
 Identities = 90/110 (81%), Positives = 97/110 (88%)
 Frame = +2

Query: 2   KENITQTGKREHHLWKKRDSAGSGQKALNLVRIVSEVSNEKEAVYGALDRWTAWEAEFPL 181
           KE   + GK+EHHLW+KRDS GSGQKALNLVRIVSE+ NEKEAVYGALD+WTAWE EFPL
Sbjct: 61  KEISKKVGKKEHHLWRKRDSIGSGQKALNLVRIVSELPNEKEAVYGALDKWTAWETEFPL 120

Query: 182 IAVAKALRILQKRNQWLRVIQVGKWMLSKGQGLTMGTYDILLLAFDMEQR 331
           IA AKALRIL+KRNQW RVIQV KWMLSKGQG TMGTYD LLLAFDM+ R
Sbjct: 121 IAAAKALRILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDWR 170


>emb|CBI30774.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  186 bits (473), Expect = 1e-45
 Identities = 90/110 (81%), Positives = 97/110 (88%)
 Frame = +2

Query: 2   KENITQTGKREHHLWKKRDSAGSGQKALNLVRIVSEVSNEKEAVYGALDRWTAWEAEFPL 181
           KE   + GK+EHHLW+KRDS GSGQKALNLVRIVSE+ NEKEAVYGALD+WTAWE EFPL
Sbjct: 61  KEISKKVGKKEHHLWRKRDSIGSGQKALNLVRIVSELPNEKEAVYGALDKWTAWETEFPL 120

Query: 182 IAVAKALRILQKRNQWLRVIQVGKWMLSKGQGLTMGTYDILLLAFDMEQR 331
           IA AKALRIL+KRNQW RVIQV KWMLSKGQG TMGTYD LLLAFDM+ R
Sbjct: 121 IAAAKALRILRKRNQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDWR 170


>ref|XP_002316747.1| predicted protein [Populus trichocarpa] gi|222859812|gb|EEE97359.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  182 bits (461), Expect = 3e-44
 Identities = 85/107 (79%), Positives = 96/107 (89%)
 Frame = +2

Query: 11  ITQTGKREHHLWKKRDSAGSGQKALNLVRIVSEVSNEKEAVYGALDRWTAWEAEFPLIAV 190
           + ++GK+EHHLW+KRDSAGSGQKALNLVRIVSE+ NEKEAVYGALD+WTAWE EFPLIA 
Sbjct: 60  VKKSGKKEHHLWQKRDSAGSGQKALNLVRIVSELPNEKEAVYGALDKWTAWETEFPLIAA 119

Query: 191 AKALRILQKRNQWLRVIQVGKWMLSKGQGLTMGTYDILLLAFDMEQR 331
           AKAL+ILQ+R QW RVIQV KWMLSKGQG T+GTYD LLLAFD + R
Sbjct: 120 AKALKILQQRRQWTRVIQVAKWMLSKGQGATLGTYDTLLLAFDKDDR 166


>gb|ACO76262.1| At4g18975-like protein [Capsella grandiflora]
           gi|226712508|gb|ACO76263.1| At4g18975-like protein
           [Capsella grandiflora]
          Length = 152

 Score =  178 bits (451), Expect = 5e-43
 Identities = 85/110 (77%), Positives = 96/110 (87%)
 Frame = +2

Query: 2   KENITQTGKREHHLWKKRDSAGSGQKALNLVRIVSEVSNEKEAVYGALDRWTAWEAEFPL 181
           KE     GK+EHHLWKK DSAGSGQKALNLVR++S +SNEKEAVYGALD+W AWE EFP+
Sbjct: 1   KEVKKVVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLSNEKEAVYGALDKWVAWEVEFPI 60

Query: 182 IAVAKALRILQKRNQWLRVIQVGKWMLSKGQGLTMGTYDILLLAFDMEQR 331
           IA AKAL+IL+KR+QW RVIQV KWMLSKGQG TMGTYD LLLAFDM++R
Sbjct: 61  IAAAKALQILRKRSQWHRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDER 110


>gb|ACO76260.1| At4g18975-like protein [Capsella grandiflora]
           gi|226712504|gb|ACO76261.1| At4g18975-like protein
           [Capsella grandiflora] gi|226712510|gb|ACO76264.1|
           At4g18975-like protein [Capsella grandiflora]
           gi|226712512|gb|ACO76265.1| At4g18975-like protein
           [Capsella grandiflora] gi|226712514|gb|ACO76266.1|
           At4g18975-like protein [Capsella grandiflora]
           gi|226712516|gb|ACO76267.1| At4g18975-like protein
           [Capsella grandiflora] gi|226712518|gb|ACO76268.1|
           At4g18975-like protein [Capsella grandiflora]
          Length = 152

 Score =  178 bits (451), Expect = 5e-43
 Identities = 85/110 (77%), Positives = 96/110 (87%)
 Frame = +2

Query: 2   KENITQTGKREHHLWKKRDSAGSGQKALNLVRIVSEVSNEKEAVYGALDRWTAWEAEFPL 181
           KE     GK+EHHLWKK DSAGSGQKALNLVR++S +SNEKEAVYGALD+W AWE EFP+
Sbjct: 1   KEVKKVVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLSNEKEAVYGALDKWVAWEVEFPI 60

Query: 182 IAVAKALRILQKRNQWLRVIQVGKWMLSKGQGLTMGTYDILLLAFDMEQR 331
           IA AKAL+IL+KR+QW RVIQV KWMLSKGQG TMGTYD LLLAFDM++R
Sbjct: 61  IAAAKALQILRKRSQWHRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDER 110


Top