BLASTX nr result

ID: Cimicifuga21_contig00021042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021042
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300681.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
gb|AAF26766.1|AC007396_15 T4O12.26 [Arabidopsis thaliana]              57   2e-06
ref|XP_002285899.1| PREDICTED: uncharacterized protein LOC100247...    56   3e-06
ref|XP_002889054.1| EMB1793 [Arabidopsis lyrata subsp. lyrata] g...    54   1e-05

>ref|XP_002300681.1| predicted protein [Populus trichocarpa] gi|222842407|gb|EEE79954.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/50 (54%), Positives = 39/50 (78%)
 Frame = +1

Query: 67  MAMKVERCIKMVSNMNYFLRSNLVIHRKLLHNGPDTVEELLDRHVVKKEK 216
           MAMK+++   + S++    RS +V +++LLH GPDT+EELLDRH+VKKEK
Sbjct: 1   MAMKLQKWRSLSSSLYMINRSCVVFNQRLLHEGPDTLEELLDRHLVKKEK 50


>gb|AAF26766.1|AC007396_15 T4O12.26 [Arabidopsis thaliana]
          Length = 179

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/59 (45%), Positives = 37/59 (62%)
 Frame = +1

Query: 40  FAECC*KINMAMKVERCIKMVSNMNYFLRSNLVIHRKLLHNGPDTVEELLDRHVVKKEK 216
           F  CC +  MA K+++   +   ++   RS  V  R+ LH GPDTVEELL+RH+ KKEK
Sbjct: 15  FQCCCLREMMAAKLQKWRNLAGRLDLMNRSGAVSTRRFLHEGPDTVEELLERHLAKKEK 73


>ref|XP_002285899.1| PREDICTED: uncharacterized protein LOC100247165 [Vitis vinifera]
          Length = 154

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/46 (50%), Positives = 34/46 (73%)
 Frame = +1

Query: 73  MKVERCIKMVSNMNYFLRSNLVIHRKLLHNGPDTVEELLDRHVVKK 210
           MK  +C  +   +N  +R+++V+ R+ LH GPDTVEELL+RH+VKK
Sbjct: 1   MKAGKCRNLAIFLNQMIRNDIVLQRRFLHEGPDTVEELLERHIVKK 46


>ref|XP_002889054.1| EMB1793 [Arabidopsis lyrata subsp. lyrata]
           gi|297334895|gb|EFH65313.1| EMB1793 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 157

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 25/50 (50%), Positives = 34/50 (68%)
 Frame = +1

Query: 67  MAMKVERCIKMVSNMNYFLRSNLVIHRKLLHNGPDTVEELLDRHVVKKEK 216
           MA K+++   +   ++   R + V  R+LLH GPDTVEELLDRH+ KKEK
Sbjct: 2   MATKLQKWRNLAGRLDLMSRRDAVSSRRLLHEGPDTVEELLDRHLAKKEK 51


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