BLASTX nr result
ID: Cimicifuga21_contig00021042
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00021042 (217 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002300681.1| predicted protein [Populus trichocarpa] gi|2... 58 9e-07 gb|AAF26766.1|AC007396_15 T4O12.26 [Arabidopsis thaliana] 57 2e-06 ref|XP_002285899.1| PREDICTED: uncharacterized protein LOC100247... 56 3e-06 ref|XP_002889054.1| EMB1793 [Arabidopsis lyrata subsp. lyrata] g... 54 1e-05 >ref|XP_002300681.1| predicted protein [Populus trichocarpa] gi|222842407|gb|EEE79954.1| predicted protein [Populus trichocarpa] Length = 157 Score = 57.8 bits (138), Expect = 9e-07 Identities = 27/50 (54%), Positives = 39/50 (78%) Frame = +1 Query: 67 MAMKVERCIKMVSNMNYFLRSNLVIHRKLLHNGPDTVEELLDRHVVKKEK 216 MAMK+++ + S++ RS +V +++LLH GPDT+EELLDRH+VKKEK Sbjct: 1 MAMKLQKWRSLSSSLYMINRSCVVFNQRLLHEGPDTLEELLDRHLVKKEK 50 >gb|AAF26766.1|AC007396_15 T4O12.26 [Arabidopsis thaliana] Length = 179 Score = 56.6 bits (135), Expect = 2e-06 Identities = 27/59 (45%), Positives = 37/59 (62%) Frame = +1 Query: 40 FAECC*KINMAMKVERCIKMVSNMNYFLRSNLVIHRKLLHNGPDTVEELLDRHVVKKEK 216 F CC + MA K+++ + ++ RS V R+ LH GPDTVEELL+RH+ KKEK Sbjct: 15 FQCCCLREMMAAKLQKWRNLAGRLDLMNRSGAVSTRRFLHEGPDTVEELLERHLAKKEK 73 >ref|XP_002285899.1| PREDICTED: uncharacterized protein LOC100247165 [Vitis vinifera] Length = 154 Score = 56.2 bits (134), Expect = 3e-06 Identities = 23/46 (50%), Positives = 34/46 (73%) Frame = +1 Query: 73 MKVERCIKMVSNMNYFLRSNLVIHRKLLHNGPDTVEELLDRHVVKK 210 MK +C + +N +R+++V+ R+ LH GPDTVEELL+RH+VKK Sbjct: 1 MKAGKCRNLAIFLNQMIRNDIVLQRRFLHEGPDTVEELLERHIVKK 46 >ref|XP_002889054.1| EMB1793 [Arabidopsis lyrata subsp. lyrata] gi|297334895|gb|EFH65313.1| EMB1793 [Arabidopsis lyrata subsp. lyrata] Length = 157 Score = 54.3 bits (129), Expect = 1e-05 Identities = 25/50 (50%), Positives = 34/50 (68%) Frame = +1 Query: 67 MAMKVERCIKMVSNMNYFLRSNLVIHRKLLHNGPDTVEELLDRHVVKKEK 216 MA K+++ + ++ R + V R+LLH GPDTVEELLDRH+ KKEK Sbjct: 2 MATKLQKWRNLAGRLDLMSRRDAVSSRRLLHEGPDTVEELLDRHLAKKEK 51