BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021041
         (757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512311.1| Ubiquitin-protein ligase BRE1A, putative [Ri...    94   2e-17
ref|XP_002264214.1| PREDICTED: uncharacterized protein LOC100262...    90   4e-16
ref|XP_002328537.1| predicted protein [Populus trichocarpa] gi|2...    76   7e-12
ref|XP_001318162.1| viral A-type inclusion protein [Trichomonas ...    67   4e-09
ref|XP_001319569.1| viral A-type inclusion protein [Trichomonas ...    65   1e-08

>ref|XP_002512311.1| Ubiquitin-protein ligase BRE1A, putative [Ricinus communis]
           gi|223548272|gb|EEF49763.1| Ubiquitin-protein ligase
           BRE1A, putative [Ricinus communis]
          Length = 622

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 84/276 (30%), Positives = 122/276 (44%), Gaps = 65/276 (23%)
 Frame = -3

Query: 662 MAKKKLSQQEKPPKDMEP-------------AMEDQSEKLANLKSLNDRLLKETVERREL 522
           MAKKKL+ Q + PK   P             +MED  +KL NLKSLN  LLKET+ERR+ 
Sbjct: 1   MAKKKLTHQSQHPKQQNPQDQNPNLAHPQNSSMEDPEDKLQNLKSLNAMLLKETLERRQQ 60

Query: 521 VNSLL--------------KSKQDLESEVDRLKNQSVESEIQKSV----------TSGFV 414
           V SL               K K DLE+E+  +  + V  EI+K +            GFV
Sbjct: 61  VESLTEAKKVLESQLGLIGKEKMDLENELSVVSEERVSLEIEKGLFRVFIETQVDDMGFV 120

Query: 413 SEQIDQEKERLKEEFWXXXXXXXXXXXXXXXEIDELSSDFSRYRDEVGKDLDLKGNEADR 234
            E++ +EKE  + E                 E ++LS    R RD +  +LD   NEA+ 
Sbjct: 121 VEKLVKEKEERENEIGLLKNEVNQLIVDVESEREKLSL-ACRERDVLSINLDNWKNEANA 179

Query: 233 LRSVVDD----------------------------LEKEIDRMGRERDGAVEEKDGLEKM 138
           L+  V D                            +EK+I+   + RD A  +     K 
Sbjct: 180 LKKKVTDMEDKEKNAEEEIMKVKVHCSQLIKQNQEIEKQIEEAKKLRDLAEIKLGEKVKE 239

Query: 137 IEDLEREMVDVVKERVEIEQAKVKQDIEIKKLQNSL 30
           +EDL R+M ++V++  EIE+ K  Q + I +L+  +
Sbjct: 240 LEDLNRDMAEIVRKNNEIEREKGGQRVRISELEKDV 275


>ref|XP_002264214.1| PREDICTED: uncharacterized protein LOC100262311 [Vitis vinifera]
           gi|298205014|emb|CBI34321.3| unnamed protein product
           [Vitis vinifera]
          Length = 613

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 79/240 (32%), Positives = 121/240 (50%), Gaps = 35/240 (14%)
 Frame = -3

Query: 662 MAKKKLSQQEKP------PKDMEPA-MEDQSEKLANLKSLNDRLLKETVERRELVNSLLK 504
           MAKKK + Q+K       P D +   MED SEKL NLKSLN  LLKET ERR+ V SL +
Sbjct: 1   MAKKKANNQDKTTQQHQDPTDHDTTPMEDPSEKLQNLKSLNSLLLKETFERRQQVESLQQ 60

Query: 503 SKQDLESEVDR--------------LKNQSVESEIQKSVTSGFVSEQID----QEKERLK 378
           S++ LESE+ R              L+ Q++  E++KSV   FV  QID    +E E++K
Sbjct: 61  SREALESELSRFAMEKKILDDELKQLREQTMGLELEKSVMGLFVETQIDDLRREEGEKVK 120

Query: 377 EE---FWXXXXXXXXXXXXXXXEIDELSSDFSRYRDEVGKDLDLKGNEADRLRSVVDDL- 210
            E                     +D +S +    RD +  + D    EA+RLR  V ++ 
Sbjct: 121 SEIEVLKEKVNEVMGNLEKQRLLLDHVSGE----RDGMRSERDFWAEEANRLRLKVVEME 176

Query: 209 ------EKEIDRMGRERDGAVEEKDGLEKMIEDLEREMVDVVKERVEIEQAKVKQDIEIK 48
                 E+++  +  E +  +EEK+  ++ IE L+ +  D+V+ R+  E  ++  D++ K
Sbjct: 177 GREKKSEEKVSVLQMECEVLIEEKEKKDESIESLKIDK-DLVERRL-AESVRLNDDLKAK 234


>ref|XP_002328537.1| predicted protein [Populus trichocarpa] gi|222838252|gb|EEE76617.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score = 76.3 bits (186), Expect = 7e-12
 Identities = 80/291 (27%), Positives = 133/291 (45%), Gaps = 71/291 (24%)
 Frame = -3

Query: 662 MAKKKLSQQEKPPKDM----------------EPAMEDQSEKLANLKSLNDRLLKETVER 531
           MAKKK+  Q + P+                  +P+MED  +K  +LK++ND L+KE  +R
Sbjct: 1   MAKKKVIHQTQDPEQQNPRDQNQNLTTQHQHQQPSMEDPDDKFQSLKTVNDLLVKEAKQR 60

Query: 530 RELVNSLLKSKQ--------------DLESEVDRLKNQSVESEIQKSVTSGFVS------ 411
           R+ V SL+K+K+              +LESE+ ++ +  V  EI+K++   F+       
Sbjct: 61  RQQVESLVKAKEALETELALYCKEKSELESELGKISDGRVSLEIEKALFCVFIETRMVEM 120

Query: 410 ----EQIDQEKERLKEEFWXXXXXXXXXXXXXXXEIDELSSDFSRYRDEVGKDLDLKGNE 243
               + + +EK     E                 E D LS  + R RD +  D+D     
Sbjct: 121 GSFVDGLVREKRGKDNEIGALESEVKGLVMNVETERDRLSRVY-RERDLLKSDVDNWMKG 179

Query: 242 ADRLRSVVDDLEK-------EIDRMGRE--------RDGAVE-----------EKDGLEK 141
           AD L+  V +LEK       EI+++ ++        +DG  E           E + +EK
Sbjct: 180 ADGLKDSVVELEKMEREGEEEIEKLYKQYALLDKEMKDGEKEIEELQRLRGLAENNLVEK 239

Query: 140 M--IEDLEREMVDVVKERVEIEQAKVKQDIEIKKLQ---NSLDAVEAELER 3
           +  IEDL+RE+  + KER EI   K +Q ++I +L+     LD + + L++
Sbjct: 240 VNEIEDLKREIGRIEKERNEIAGEKSEQKVKIGELERKAGELDEIVSSLQK 290


>ref|XP_001318162.1| viral A-type inclusion protein [Trichomonas vaginalis G3]
            gi|121900914|gb|EAY05939.1| viral A-type inclusion
            protein, putative [Trichomonas vaginalis G3]
          Length = 5296

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 51/244 (20%), Positives = 107/244 (43%), Gaps = 18/244 (7%)
 Frame = -3

Query: 683  HLFSTKSMAKKKLSQQEKPPKDMEPAMEDQSEKLANLKSLNDRLLKETVERRELVNSLLK 504
            +L + K+  +KKL + E+   + +  +E   E   NL++      K+  E  E   +L +
Sbjct: 3928 NLENEKNETQKKLEEAEQQKAETQKLLEQTEEAKKNLENEKSETEKKLQETEEAKKNLEQ 3987

Query: 503  SKQDLESEVDRLKNQSVESEIQKSVTSGFVSEQIDQEKERLKEEFWXXXXXXXXXXXXXX 324
             K D++ ++D  K Q V  E +K+ T   + E+ ++ K+ L+ E                
Sbjct: 3988 EKSDIQKKLDETKQQKVNLENEKAETQKLL-EETEEAKKNLENEK-AETQKKLDEAEEAK 4045

Query: 323  XEIDELSSDFSRYRDEVGKDLDLKGNEADRLRSVVDDLEKEIDRMGRERDGAV------- 165
              +++  SD  +  +EV  +     NE +  +  +++ EK  D++  E+           
Sbjct: 4046 KNLEQEKSDAEKKLEEVQNEKSALENEKNETQKKLEEAEKAKDQIVEEKSAVERQLVESQ 4105

Query: 164  -----------EEKDGLEKMIEDLEREMVDVVKERVEIEQAKVKQDIEIKKLQNSLDAVE 18
                       EEK  L++ + DL+ ++ D+ K+  + E  K ++  +   LQ  LD ++
Sbjct: 4106 KDSSENQKQQDEEKSKLQQQLSDLQNKLNDLEKKLADKENEKEQEKTQKDDLQKQLDQLQ 4165

Query: 17   AELE 6
             + +
Sbjct: 4166 KDFD 4169



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 49/232 (21%), Positives = 105/232 (45%), Gaps = 18/232 (7%)
 Frame = -3

Query: 683  HLFSTKSMAKKKLSQQEKPPKDMEPAMEDQSEKLANLKSLNDRLLKETVERRELVNSLLK 504
            +L + KS  +KKL + E+  K++E    D  +KL   K     L  E  E ++L+    +
Sbjct: 3963 NLENEKSETEKKLQETEEAKKNLEQEKSDIQKKLDETKQQKVNLENEKAETQKLLEETEE 4022

Query: 503  SKQDLESEVDRLKNQSVESEIQKSVTSGFVS------EQIDQEKERLKEEFWXXXXXXXX 342
            +K++LE+E    + +  E+E  K       S      E++  EK  L+ E          
Sbjct: 4023 AKKNLENEKAETQKKLDEAEEAKKNLEQEKSDAEKKLEEVQNEKSALENEKNETQKKLEE 4082

Query: 341  XXXXXXXEIDELSS----------DFSRYRDEVGKDLDLKGNEADRLRSVVDDLEKEIDR 192
                    ++E S+          D S  + +  ++      +   L++ ++DLEK++  
Sbjct: 4083 AEKAKDQIVEEKSAVERQLVESQKDSSENQKQQDEEKSKLQQQLSDLQNKLNDLEKKLAD 4142

Query: 191  MGRERDGAVEEKDGLEKMIEDLEREMVDVVKERVEIEQA--KVKQDIEIKKL 42
               E++    +KD L+K ++ L+++  ++ +E+ +++     +K+ I+ K +
Sbjct: 4143 KENEKEQEKTQKDDLQKQLDQLQKDFDNLEREKQKLQDKNDSMKETIDSKNM 4194



 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 49/218 (22%), Positives = 97/218 (44%), Gaps = 4/218 (1%)
 Frame = -3

Query: 659  AKKKLSQQEKPPKDMEPAMEDQSEKLANLKSLNDRLLKET----VERRELVNSLLKSKQD 492
            AKK L  ++   +      E+  + LAN KS  +R L+E      E    +N   ++ ++
Sbjct: 3869 AKKNLENEKAETEKRLQETEEAKKNLANEKSEAERKLEEVQNEKAETERKLNEAEEANKN 3928

Query: 491  LESEVDRLKNQSVESEIQKSVTSGFVSEQIDQEKERLKEEFWXXXXXXXXXXXXXXXEID 312
            LE+E +  + +  E+E QK+ T   + EQ ++ K+ L+ E                  ++
Sbjct: 3929 LENEKNETQKKLEEAEQQKAETQKLL-EQTEEAKKNLENE-KSETEKKLQETEEAKKNLE 3986

Query: 311  ELSSDFSRYRDEVGKDLDLKGNEADRLRSVVDDLEKEIDRMGRERDGAVEEKDGLEKMIE 132
            +  SD  +  DE  +      NE    + ++++ E+    +  E+    ++ D  E+  +
Sbjct: 3987 QEKSDIQKKLDETKQQKVNLENEKAETQKLLEETEEAKKNLENEKAETQKKLDEAEEAKK 4046

Query: 131  DLEREMVDVVKERVEIEQAKVKQDIEIKKLQNSLDAVE 18
            +LE+E  D  K+  E++  K   + E  + Q  L+  E
Sbjct: 4047 NLEQEKSDAEKKLEEVQNEKSALENEKNETQKKLEEAE 4084


>ref|XP_001319569.1| viral A-type inclusion protein [Trichomonas vaginalis G3]
           gi|121902355|gb|EAY07346.1| viral A-type inclusion
           protein, putative [Trichomonas vaginalis G3]
          Length = 940

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 40/206 (19%), Positives = 104/206 (50%)
 Frame = -3

Query: 644 SQQEKPPKDMEPAMEDQSEKLANLKSLNDRLLKETVERRELVNSLLKSKQDLESEVDRLK 465
           S+ E   KD + A E+  ++  NLK  N  + ++  E ++ +    K+ +DL+ +++ + 
Sbjct: 323 SENELLKKDSDSAQEELMKENENLKKENGEITEKIEELQKEIGERQKTVEDLKQKIEEIN 382

Query: 464 NQSVESEIQKSVTSGFVSEQIDQEKERLKEEFWXXXXXXXXXXXXXXXEIDELSSDFSRY 285
           +Q+ E   +       ++++I++  ++L E+                 ++ +   +  + 
Sbjct: 383 SQNAEESEKNQKEIDDLTQEIEEINQKLDEK------------QKENDDLKKEKENLQKE 430

Query: 284 RDEVGKDLDLKGNEADRLRSVVDDLEKEIDRMGRERDGAVEEKDGLEKMIEDLEREMVDV 105
            DE+ K+ +   N+ + L+   DDL+K +++   E+   +EE   ++K  E+ ++E+ D+
Sbjct: 431 VDEIKKNFEENQNQIENLQKENDDLKKGMNQSSEEKQKEIEE---IKKNFEEKQKEIDDL 487

Query: 104 VKERVEIEQAKVKQDIEIKKLQNSLD 27
            +E  E+ Q   ++  EI++++  ++
Sbjct: 488 TQENEEMNQKLDEKQKEIEEIKQKIE 513



 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 51/234 (21%), Positives = 110/234 (47%), Gaps = 17/234 (7%)
 Frame = -3

Query: 656 KKKLSQQEKPPKDMEPAMEDQSEKLANLKSLNDRLLKETVERRELVNSLL---------- 507
           +K++ +++K  +D++  +E+ + + A     N + + +  +  E +N  L          
Sbjct: 361 QKEIGERQKTVEDLKQKIEEINSQNAEESEKNQKEIDDLTQEIEEINQKLDEKQKENDDL 420

Query: 506 -KSKQDLESEVDRLKNQSVESEIQKSVTSGFVSEQIDQEKERLKEEFWXXXXXXXXXXXX 330
            K K++L+ EVD +K    E++ Q         E + +E + LK+               
Sbjct: 421 KKEKENLQKEVDEIKKNFEENQNQ--------IENLQKENDDLKKGM-------NQSSEE 465

Query: 329 XXXEIDELSSDFSRYRDEVGKDLDLKGNEADRLRSVVDDLEKEIDRMGRERDGAVEEKDG 150
              EI+E+  +F    +E  K++D    E + +   +D+ +KEI+ + ++ +   ++   
Sbjct: 466 KQKEIEEIKKNF----EEKQKEIDDLTQENEEMNQKLDEKQKEIEEIKQKIEENQKQNVD 521

Query: 149 LEKMIEDLEREMVDV------VKERVEIEQAKVKQDIEIKKLQNSLDAVEAELE 6
           L+K +EDL +E+  +       +E V  EQ  +++ IE  +L+N  + +  ELE
Sbjct: 522 LKKEVEDLTQEIEKLEEQKSQKEENVNSEQENLQKQIE--ELKNEKETISNELE 573



 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 41/202 (20%), Positives = 98/202 (48%), Gaps = 7/202 (3%)
 Frame = -3

Query: 590 EKLANLKSLNDRLLKETVERRELVNSLLKSKQDLESEVDRLKNQSVESEIQKSVTSGFVS 411
           EK   +  L + L K+T E+   +N L+   +DL+ ++D +KNQ+   + +K  +   ++
Sbjct: 10  EKDKQINELKEELQKQTEEKETEINELMNQIEDLQKQIDEIKNQNENLQKEKENSLNEMN 69

Query: 410 EQID---QEKERLKEEFWXXXXXXXXXXXXXXXEIDELSSDFSRYRDEVGKDLDLKGNEA 240
           +QID   +EKE  ++                  +I++L ++     + + K+ +   NE 
Sbjct: 70  KQIDDLQKEKEETEKALIEENEDYKNQLSELKKQIEDLQNENEEKVENLKKENEEFNNEI 129

Query: 239 DRLRSVVDDLEKEI-DRMGRERDGAVEEKDGLEKMIEDL--EREMVDVVKER-VEIEQAK 72
             L+  ++ L+K + +   +++   +E    +EK+ + +  E++++ V  E  ++++Q  
Sbjct: 130 KDLQDQIELLKKSMSESEDKDQKFVIELNQQIEKLKQKVSDEKDLIQVKDEEIIDLKQKN 189

Query: 71  VKQDIEIKKLQNSLDAVEAELE 6
                +  KL    + +E ++E
Sbjct: 190 TDLSEQNNKLNEDKNELEKQIE 211