BLASTX nr result

ID: Cimicifuga21_contig00021032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021032
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143514.1| PREDICTED: 60S ribosomal protein L6, mitocho...    60   1e-07
ref|XP_002267044.1| PREDICTED: 60S ribosomal protein L6, mitocho...    60   2e-07
emb|CAN72978.1| hypothetical protein VITISV_009029 [Vitis vinifera]    60   2e-07
gb|AFK46285.1| unknown [Medicago truncatula]                           60   2e-07
ref|XP_002527470.1| 50S ribosomal protein L6, putative [Ricinus ...    59   4e-07

>ref|XP_004143514.1| PREDICTED: 60S ribosomal protein L6, mitochondrial-like [Cucumis
           sativus] gi|449496483|ref|XP_004160146.1| PREDICTED: 60S
           ribosomal protein L6, mitochondrial-like [Cucumis
           sativus]
          Length = 102

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = +3

Query: 3   HQFAAAVRSCKPPEVYKGKGIMYTDEVI 86
           HQFAAAVRSCKPPEVYKGKGIMY DEVI
Sbjct: 66  HQFAAAVRSCKPPEVYKGKGIMYVDEVI 93


>ref|XP_002267044.1| PREDICTED: 60S ribosomal protein L6, mitochondrial [Vitis vinifera]
           gi|297735153|emb|CBI17515.3| unnamed protein product
           [Vitis vinifera]
          Length = 102

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = +3

Query: 3   HQFAAAVRSCKPPEVYKGKGIMYTDEVI 86
           HQFAAAVRSCKPPEVYKGKGIMY DEVI
Sbjct: 66  HQFAAAVRSCKPPEVYKGKGIMYIDEVI 93


>emb|CAN72978.1| hypothetical protein VITISV_009029 [Vitis vinifera]
          Length = 102

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = +3

Query: 3   HQFAAAVRSCKPPEVYKGKGIMYTDEVI 86
           HQFAAAVRSCKPPEVYKGKGIMY DEVI
Sbjct: 66  HQFAAAVRSCKPPEVYKGKGIMYIDEVI 93


>gb|AFK46285.1| unknown [Medicago truncatula]
          Length = 102

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +3

Query: 3   HQFAAAVRSCKPPEVYKGKGIMYTDEVI 86
           HQFAA VR+CKPPEVYKGKGIMYTDEVI
Sbjct: 66  HQFAATVRNCKPPEVYKGKGIMYTDEVI 93


>ref|XP_002527470.1| 50S ribosomal protein L6, putative [Ricinus communis]
           gi|223533110|gb|EEF34868.1| 50S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 102

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +3

Query: 3   HQFAAAVRSCKPPEVYKGKGIMYTDEVI 86
           HQFAA+VRSCKPPEVYKGKGIMY DEVI
Sbjct: 66  HQFAASVRSCKPPEVYKGKGIMYIDEVI 93


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