BLASTX nr result

ID: Cimicifuga21_contig00021004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00021004
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33270.3| unnamed protein product [Vitis vinifera]              135   9e-30
ref|XP_002309968.1| predicted protein [Populus trichocarpa] gi|2...   133   6e-29
ref|XP_002306300.1| predicted protein [Populus trichocarpa] gi|2...   132   7e-29
ref|XP_002531675.1| poly-A binding protein, putative [Ricinus co...   131   2e-28
gb|AFW71284.1| hypothetical protein ZEAMMB73_459562 [Zea mays]        129   8e-28

>emb|CBI33270.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  135 bits (341), Expect = 9e-30
 Identities = 70/112 (62%), Positives = 83/112 (74%), Gaps = 10/112 (8%)
 Frame = +1

Query: 214 DCLVVLISAQVSVTLQKLVHV---ACTAEEVQQHFESCGTVNRVTIRN-------GYAYV 363
           DC  + +  Q ++ ++KL+H    ACT EEVQQHF+SCGTVNRVTI         G+AYV
Sbjct: 3   DCCHLQVMWQKTLNVEKLIHFVDYACTPEEVQQHFQSCGTVNRVTILTDKYGQPKGFAYV 62

Query: 364 EFLEVEAVQEALKLNESELHGRQLKVSPKRTNFPGMRRPHPRNYNPYMAYQF 519
           EFLEVEAVQEAL LNESELHGRQLKV  KRTN PGM++  PR +NPYM Y+F
Sbjct: 63  EFLEVEAVQEALLLNESELHGRQLKVLAKRTNVPGMKQFRPRRFNPYMGYRF 114


>ref|XP_002309968.1| predicted protein [Populus trichocarpa] gi|222852871|gb|EEE90418.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  133 bits (334), Expect = 6e-29
 Identities = 66/91 (72%), Positives = 74/91 (81%), Gaps = 7/91 (7%)
 Frame = +1

Query: 268 VHVACTAEEVQQHFESCGTVNRVTIRN-------GYAYVEFLEVEAVQEALKLNESELHG 426
           V  ACT EEVQQHF+SCGTVNRVTI         G+AYVEF+EVEAVQEAL LNESELHG
Sbjct: 97  VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEALALNESELHG 156

Query: 427 RQLKVSPKRTNFPGMRRPHPRNYNPYMAYQF 519
           RQLKVSPKRTN PGM++ HPR++NPYM  +F
Sbjct: 157 RQLKVSPKRTNVPGMKQYHPRSFNPYMGNRF 187


>ref|XP_002306300.1| predicted protein [Populus trichocarpa] gi|222855749|gb|EEE93296.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  132 bits (333), Expect = 7e-29
 Identities = 67/91 (73%), Positives = 72/91 (79%), Gaps = 7/91 (7%)
 Frame = +1

Query: 268 VHVACTAEEVQQHFESCGTVNRVTIRN-------GYAYVEFLEVEAVQEALKLNESELHG 426
           V  ACT EEVQQHF+SCGTVNRVTI         G+AYVEFLEVEAVQEAL LNESELHG
Sbjct: 97  VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEALALNESELHG 156

Query: 427 RQLKVSPKRTNFPGMRRPHPRNYNPYMAYQF 519
           RQLKVSPKRTN PGM++  PR  NPYM Y+F
Sbjct: 157 RQLKVSPKRTNVPGMKQYRPRRINPYMGYRF 187


>ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
           gi|223528706|gb|EEF30719.1| poly-A binding protein,
           putative [Ricinus communis]
          Length = 218

 Score =  131 bits (329), Expect = 2e-28
 Identities = 65/91 (71%), Positives = 72/91 (79%), Gaps = 7/91 (7%)
 Frame = +1

Query: 268 VHVACTAEEVQQHFESCGTVNRVTIRN-------GYAYVEFLEVEAVQEALKLNESELHG 426
           V  ACT EEVQQHF+SCGTVNRVTI         G+AYVEFLEVEA+QEAL LNESELHG
Sbjct: 97  VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAIQEALLLNESELHG 156

Query: 427 RQLKVSPKRTNFPGMRRPHPRNYNPYMAYQF 519
           RQLKV PKRTN PGM++  PR +NPYM Y+F
Sbjct: 157 RQLKVLPKRTNVPGMKQYRPRRFNPYMGYRF 187


>gb|AFW71284.1| hypothetical protein ZEAMMB73_459562 [Zea mays]
          Length = 228

 Score =  129 bits (324), Expect = 8e-28
 Identities = 64/91 (70%), Positives = 71/91 (78%), Gaps = 7/91 (7%)
 Frame = +1

Query: 268 VHVACTAEEVQQHFESCGTVNRVTIRN-------GYAYVEFLEVEAVQEALKLNESELHG 426
           V  ACT EEVQQHF SCGTVNRVTI         G+AYVEF+EVEAVQEA+KLNESELHG
Sbjct: 130 VDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAIKLNESELHG 189

Query: 427 RQLKVSPKRTNFPGMRRPHPRNYNPYMAYQF 519
           RQLKV+PKRTN PGM++P  R +NPY  Y F
Sbjct: 190 RQLKVAPKRTNVPGMKQPRGRGFNPYRPYVF 220


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