BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020988
         (1122 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis ...   317   3e-84
emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera]   317   3e-84
ref|XP_002509550.1| ribosome recycling factor, putative [Ricinus...   306   8e-81
dbj|BAD44436.1| putative ribosome recycling factor [Arabidopsis ...   301   3e-79
ref|NP_186829.3| ribosome recycling factor [Arabidopsis thaliana...   301   3e-79

>ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis vinifera]
           gi|296090242|emb|CBI40061.3| unnamed protein product
           [Vitis vinifera]
          Length = 258

 Score =  317 bits (813), Expect = 3e-84
 Identities = 162/210 (77%), Positives = 183/210 (87%)
 Frame = +1

Query: 259 EFLKEKRRGFAXXXXXXXXXXXNTVQVVPDIGPTVKANTISLMEAAIVALSRELSKLRTG 438
           +FL+E RRGFA           NTV+VVPDIGP VK N +S M+AA+VALSRELSKLRTG
Sbjct: 46  DFLRESRRGFAKGRKSKDSDAGNTVEVVPDIGPAVKENAMSQMDAAVVALSRELSKLRTG 105

Query: 439 RASAGMLDHIIVETGGVKMPLSRIAVISVIDSKTLSVTPYDPNALKELEHAIVSSPLGLN 618
           RASAGMLDHIIVETGGVKMPLSR+AV+SV+D KTLSVTPYD +ALK+LE+AIVSSPLGLN
Sbjct: 106 RASAGMLDHIIVETGGVKMPLSRLAVVSVLDPKTLSVTPYDLDALKQLENAIVSSPLGLN 165

Query: 619 PQVDGQRLIAAIPPLTKEHMQAICKVVTKSAEDVKQSIRRARQKALDTIKKSASSLSKDD 798
           P+ DG+RLIA IPPLTKEH+QA+CKVV KS EDVKQSIRRARQKALD IKK+ SSL KD 
Sbjct: 166 PKADGERLIAVIPPLTKEHIQAMCKVVAKSCEDVKQSIRRARQKALDMIKKAGSSLPKDV 225

Query: 799 VKRLEKEIDELTKKYIKSAEDMCKSKEKEI 888
            KRLEKE+DELTKK++KSAEDMCK+KEKEI
Sbjct: 226 AKRLEKEVDELTKKFVKSAEDMCKAKEKEI 255


>emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera]
          Length = 258

 Score =  317 bits (813), Expect = 3e-84
 Identities = 162/210 (77%), Positives = 183/210 (87%)
 Frame = +1

Query: 259 EFLKEKRRGFAXXXXXXXXXXXNTVQVVPDIGPTVKANTISLMEAAIVALSRELSKLRTG 438
           +FL+E RRGFA           NTV+VVPDIGP VK N +S M+AA+VALSRELSKLRTG
Sbjct: 46  DFLRESRRGFAKGRKSKDSDAGNTVEVVPDIGPAVKENAMSQMDAAVVALSRELSKLRTG 105

Query: 439 RASAGMLDHIIVETGGVKMPLSRIAVISVIDSKTLSVTPYDPNALKELEHAIVSSPLGLN 618
           RASAGMLDHIIVETGGVKMPLSR+AV+SV+D KTLSVTPYD +ALK+LE+AIVSSPLGLN
Sbjct: 106 RASAGMLDHIIVETGGVKMPLSRLAVVSVLDPKTLSVTPYDLDALKQLENAIVSSPLGLN 165

Query: 619 PQVDGQRLIAAIPPLTKEHMQAICKVVTKSAEDVKQSIRRARQKALDTIKKSASSLSKDD 798
           P+ DG+RLIA IPPLTKEH+QA+CKVV KS EDVKQSIRRARQKALD IKK+ SSL KD 
Sbjct: 166 PKADGERLIAVIPPLTKEHIQAMCKVVAKSCEDVKQSIRRARQKALDXIKKAGSSLPKDV 225

Query: 799 VKRLEKEIDELTKKYIKSAEDMCKSKEKEI 888
            KRLEKE+DELTKK++KSAEDMCK+KEKEI
Sbjct: 226 AKRLEKEVDELTKKFVKSAEDMCKAKEKEI 255


>ref|XP_002509550.1| ribosome recycling factor, putative [Ricinus communis]
           gi|223549449|gb|EEF50937.1| ribosome recycling factor,
           putative [Ricinus communis]
          Length = 262

 Score =  306 bits (783), Expect = 8e-81
 Identities = 156/210 (74%), Positives = 179/210 (85%)
 Frame = +1

Query: 262 FLKEKRRGFAXXXXXXXXXXXNTVQVVPDIGPTVKANTISLMEAAIVALSRELSKLRTGR 441
           FL + RRGFA            TVQV PDIGP VK +    MEAAIV+LSREL+KLRTGR
Sbjct: 51  FLIDSRRGFAKGKKSKDDSGGGTVQVTPDIGPAVKESAALQMEAAIVSLSRELTKLRTGR 110

Query: 442 ASAGMLDHIIVETGGVKMPLSRIAVISVIDSKTLSVTPYDPNALKELEHAIVSSPLGLNP 621
           ASAGMLDHIIVET GVKMPL+R+AV++V+D KTLSV PYDPN +  LE AIVSSPLGLNP
Sbjct: 111 ASAGMLDHIIVETDGVKMPLNRLAVVAVMDPKTLSVNPYDPNMVSALEKAIVSSPLGLNP 170

Query: 622 QVDGQRLIAAIPPLTKEHMQAICKVVTKSAEDVKQSIRRARQKALDTIKKSASSLSKDDV 801
           +VDG+RLIA+IPPLTKEHMQA+CKVV KS E+VKQS+RRARQKALDTIKK+ S+LSKDDV
Sbjct: 171 RVDGERLIASIPPLTKEHMQAMCKVVGKSCEEVKQSVRRARQKALDTIKKAGSNLSKDDV 230

Query: 802 KRLEKEIDELTKKYIKSAEDMCKSKEKEIT 891
           KRLEKE+DELTKK++KSAED+CK+KEKEIT
Sbjct: 231 KRLEKEVDELTKKFVKSAEDICKAKEKEIT 260


>dbj|BAD44436.1| putative ribosome recycling factor [Arabidopsis thaliana]
          Length = 267

 Score =  301 bits (770), Expect = 3e-79
 Identities = 151/213 (70%), Positives = 180/213 (84%)
 Frame = +1

Query: 259 EFLKEKRRGFAXXXXXXXXXXXNTVQVVPDIGPTVKANTISLMEAAIVALSRELSKLRTG 438
           +FL++ RRGFA             V   PDIGPTVKA   S MEAAI ALSR+L+KLRTG
Sbjct: 55  DFLRDSRRGFAKGKKSKDDSGTGMVDAAPDIGPTVKAAASSQMEAAIDALSRDLTKLRTG 114

Query: 439 RASAGMLDHIIVETGGVKMPLSRIAVISVIDSKTLSVTPYDPNALKELEHAIVSSPLGLN 618
           RA+ GMLDHI+VETGGVKMPL+ +A++SV+D KTLSV PYDP+ +KELE AIV+SPLGLN
Sbjct: 115 RAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYDPDTVKELEKAIVASPLGLN 174

Query: 619 PQVDGQRLIAAIPPLTKEHMQAICKVVTKSAEDVKQSIRRARQKALDTIKKSASSLSKDD 798
           P++DGQRL+A+IP LTKEH+QA+CK+VTKS+E VKQSIRRARQKALDTIKK+ SSL KD+
Sbjct: 175 PKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVVKQSIRRARQKALDTIKKAGSSLPKDE 234

Query: 799 VKRLEKEIDELTKKYIKSAEDMCKSKEKEITSS 897
           VKRLEKE+DELTKK++KSAEDMCKSKEKEIT +
Sbjct: 235 VKRLEKEVDELTKKFVKSAEDMCKSKEKEITEA 267


>ref|NP_186829.3| ribosome recycling factor [Arabidopsis thaliana]
           gi|34146850|gb|AAQ62433.1| At3g01800 [Arabidopsis
           thaliana] gi|51970776|dbj|BAD44080.1| putative ribosome
           recycling factor [Arabidopsis thaliana]
           gi|62319213|dbj|BAD94407.1| putative ribosome recycling
           factor [Arabidopsis thaliana]
           gi|332640195|gb|AEE73716.1| ribosome recycling factor
           [Arabidopsis thaliana]
          Length = 267

 Score =  301 bits (770), Expect = 3e-79
 Identities = 151/213 (70%), Positives = 180/213 (84%)
 Frame = +1

Query: 259 EFLKEKRRGFAXXXXXXXXXXXNTVQVVPDIGPTVKANTISLMEAAIVALSRELSKLRTG 438
           +FL++ RRGFA             V   PDIGPTVKA   S MEAAI ALSR+L+KLRTG
Sbjct: 55  DFLRDSRRGFAKGKKSKDDSGTGMVDAAPDIGPTVKAAASSQMEAAIDALSRDLTKLRTG 114

Query: 439 RASAGMLDHIIVETGGVKMPLSRIAVISVIDSKTLSVTPYDPNALKELEHAIVSSPLGLN 618
           RA+ GMLDHI+VETGGVKMPL+ +A++SV+D KTLSV PYDP+ +KELE AIV+SPLGLN
Sbjct: 115 RAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYDPDTVKELEKAIVASPLGLN 174

Query: 619 PQVDGQRLIAAIPPLTKEHMQAICKVVTKSAEDVKQSIRRARQKALDTIKKSASSLSKDD 798
           P++DGQRL+A+IP LTKEH+QA+CK+VTKS+E VKQSIRRARQKALDTIKK+ SSL KD+
Sbjct: 175 PKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVVKQSIRRARQKALDTIKKAGSSLPKDE 234

Query: 799 VKRLEKEIDELTKKYIKSAEDMCKSKEKEITSS 897
           VKRLEKE+DELTKK++KSAEDMCKSKEKEIT +
Sbjct: 235 VKRLEKEVDELTKKFVKSAEDMCKSKEKEITEA 267