BLASTX nr result

ID: Cimicifuga21_contig00020979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020979
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313672.1| predicted protein [Populus trichocarpa] gi|2...    70   7e-15
ref|XP_002523787.1| poly [ADP-ribose] polymerase, putative [Rici...    64   2e-13
ref|XP_003538122.1| PREDICTED: poly [ADP-ribose] polymerase 3-li...    69   2e-13
ref|XP_003606139.1| Poly [Medicago truncatula] gi|355507194|gb|A...    69   3e-13
sp|Q1SGF1.1|PARP3_MEDTR RecName: Full=Putative poly [ADP-ribose]...    69   3e-13

>ref|XP_002313672.1| predicted protein [Populus trichocarpa] gi|222850080|gb|EEE87627.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 69.7 bits (169), Expect(2) = 7e-15
 Identities = 31/46 (67%), Positives = 35/46 (76%)
 Frame = -1

Query: 139 VNGLGRKKRDKKEHTIWKDDIKVPCSLLIRSNHKESPLGYNEDAAY 2
           V GLG+KK D+ EH IWKDDIKVPC  LI S H++SPL YNE A Y
Sbjct: 737 VKGLGKKKTDESEHFIWKDDIKVPCGRLIPSEHRDSPLEYNEYAVY 782



 Score = 35.4 bits (80), Expect(2) = 7e-15
 Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = -3

Query: 356 MCLDPCDVSTRCSLTIVDKPKGFLVFSVAC--DQIIEVSISPK 234
           +C D    + R   T V++P+GFLV +VA   DQIIEV   P+
Sbjct: 683 VCSDAAAEAARYGFTSVERPEGFLVLAVASLGDQIIEVKSPPE 725


>ref|XP_002523787.1| poly [ADP-ribose] polymerase, putative [Ricinus communis]
           gi|223536875|gb|EEF38513.1| poly [ADP-ribose]
           polymerase, putative [Ricinus communis]
          Length = 815

 Score = 64.3 bits (155), Expect(2) = 2e-13
 Identities = 28/46 (60%), Positives = 34/46 (73%)
 Frame = -1

Query: 139 VNGLGRKKRDKKEHTIWKDDIKVPCSLLIRSNHKESPLGYNEDAAY 2
           V GLGRKK D+ EH +W+DDIKVPC  L+ S +K+ PL YNE A Y
Sbjct: 743 VKGLGRKKTDESEHFMWRDDIKVPCGRLMPSENKDGPLEYNEYAVY 788



 Score = 35.8 bits (81), Expect(2) = 2e-13
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = -3

Query: 356 MCLDPCDVSTRCSLTIVDKPKGFLVFSVAC--DQIIEVSISPK 234
           +C D    + R   T VD+P+GFL+ +VA   D++ EVS +P+
Sbjct: 689 VCSDAAAEAARYGFTAVDRPEGFLILAVASLGDEVTEVSSTPE 731


>ref|XP_003538122.1| PREDICTED: poly [ADP-ribose] polymerase 3-like [Glycine max]
          Length = 812

 Score = 69.3 bits (168), Expect(2) = 2e-13
 Identities = 29/46 (63%), Positives = 36/46 (78%)
 Frame = -1

Query: 139 VNGLGRKKRDKKEHTIWKDDIKVPCSLLIRSNHKESPLGYNEDAAY 2
           V GLG+KK D+ EH +WKDDIKVPC  L+ S+H++SPL YNE A Y
Sbjct: 741 VKGLGKKKTDESEHFVWKDDIKVPCGKLVASDHQDSPLEYNEYAVY 786



 Score = 30.8 bits (68), Expect(2) = 2e-13
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -3

Query: 356 MCLDPCDVSTRCSLTIVDKPKGFLVFSVAC--DQIIEVSISPK 234
           +C D    + R   T VD+P+GFLV ++A   ++I E+   P+
Sbjct: 687 ICSDAAAEAARYGFTAVDRPEGFLVLAIASLGNEITELKSPPE 729


>ref|XP_003606139.1| Poly [Medicago truncatula] gi|355507194|gb|AES88336.1| Poly
           [Medicago truncatula]
          Length = 814

 Score = 68.6 bits (166), Expect(2) = 3e-13
 Identities = 29/46 (63%), Positives = 35/46 (76%)
 Frame = -1

Query: 139 VNGLGRKKRDKKEHTIWKDDIKVPCSLLIRSNHKESPLGYNEDAAY 2
           V GLG+KK D+ EH +WKDDIKVPC  +I S H++SPL YNE A Y
Sbjct: 743 VKGLGKKKTDESEHFVWKDDIKVPCGSIIASEHEDSPLEYNEYAVY 788



 Score = 30.8 bits (68), Expect(2) = 3e-13
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -3

Query: 356 MCLDPCDVSTRCSLTIVDKPKGFLVFSVAC--DQIIEVSISPK 234
           +C D    + R   T VD+P+GFLV ++A   ++I E+   P+
Sbjct: 689 VCSDAAAEAARYGFTAVDRPEGFLVLAIASLGNEITELKSPPE 731


>sp|Q1SGF1.1|PARP3_MEDTR RecName: Full=Putative poly [ADP-ribose] polymerase 3;
           Short=PARP-3; AltName: Full=NAD(+)
           ADP-ribosyltransferase 3; Short=ADPRT-3; AltName:
           Full=Poly[ADP-ribose] synthase 3
          Length = 799

 Score = 68.6 bits (166), Expect(2) = 3e-13
 Identities = 29/46 (63%), Positives = 35/46 (76%)
 Frame = -1

Query: 139 VNGLGRKKRDKKEHTIWKDDIKVPCSLLIRSNHKESPLGYNEDAAY 2
           V GLG+KK D+ EH +WKDDIKVPC  +I S H++SPL YNE A Y
Sbjct: 728 VKGLGKKKTDESEHFVWKDDIKVPCGSIIASEHEDSPLEYNEYAVY 773



 Score = 30.8 bits (68), Expect(2) = 3e-13
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -3

Query: 356 MCLDPCDVSTRCSLTIVDKPKGFLVFSVAC--DQIIEVSISPK 234
           +C D    + R   T VD+P+GFLV ++A   ++I E+   P+
Sbjct: 674 VCSDAAAEAARYGFTAVDRPEGFLVLAIASLGNEITELKSPPE 716


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