BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020976
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...    82   4e-16
emb|CBI18915.3| unnamed protein product [Vitis vinifera]               82   4e-16
gb|ACD63085.1| RNA polymerase II largest subunit [Illicium parvi...    81   8e-16
gb|AAQ08518.1| RNA polymerase II largest subunit [Amborella tric...    81   8e-16
gb|AAQ08517.1| RNA polymerase II largest subunit [Nymphaea odorata]    80   2e-15

>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
           vinifera]
          Length = 1848

 Score = 82.0 bits (201), Expect(2) = 4e-16
 Identities = 42/54 (77%), Positives = 45/54 (83%)
 Frame = -3

Query: 280 DTIADAAAIEHFNETIAKAKNEVKELIRAAQENMLEPEAGGTIMESFENRVNHV 119
           DTIADAA +E  NETI+KAKNEVKELIRAAQE  LE E G T+MESFENRVN V
Sbjct: 686 DTIADAATMEKINETISKAKNEVKELIRAAQERQLEAEPGRTMMESFENRVNQV 739



 Score = 27.3 bits (59), Expect(2) = 4e-16
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -1

Query: 39  VLNKARDDAGSNA 1
           VLNKARDDAGS+A
Sbjct: 739 VLNKARDDAGSSA 751


>emb|CBI18915.3| unnamed protein product [Vitis vinifera]
          Length = 1565

 Score = 82.0 bits (201), Expect(2) = 4e-16
 Identities = 42/54 (77%), Positives = 45/54 (83%)
 Frame = -3

Query: 280 DTIADAAAIEHFNETIAKAKNEVKELIRAAQENMLEPEAGGTIMESFENRVNHV 119
           DTIADAA +E  NETI+KAKNEVKELIRAAQE  LE E G T+MESFENRVN V
Sbjct: 734 DTIADAATMEKINETISKAKNEVKELIRAAQERQLEAEPGRTMMESFENRVNQV 787



 Score = 27.3 bits (59), Expect(2) = 4e-16
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -1

Query: 39  VLNKARDDAGSNA 1
           VLNKARDDAGS+A
Sbjct: 787 VLNKARDDAGSSA 799


>gb|ACD63085.1| RNA polymerase II largest subunit [Illicium parviflorum]
          Length = 1013

 Score = 80.9 bits (198), Expect(2) = 8e-16
 Identities = 41/54 (75%), Positives = 45/54 (83%)
 Frame = -3

Query: 280 DTIADAAAIEHFNETIAKAKNEVKELIRAAQENMLEPEAGGTIMESFENRVNHV 119
           DTIADAA +E  NETI+KAKNEVKELI+AAQE  LE E G T+MESFENRVN V
Sbjct: 608 DTIADAATMEKINETISKAKNEVKELIKAAQEKQLEAEPGRTMMESFENRVNQV 661



 Score = 27.3 bits (59), Expect(2) = 8e-16
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -1

Query: 39  VLNKARDDAGSNA 1
           VLNKARDDAGS+A
Sbjct: 661 VLNKARDDAGSSA 673


>gb|AAQ08518.1| RNA polymerase II largest subunit [Amborella trichopoda]
          Length = 1013

 Score = 80.9 bits (198), Expect(2) = 8e-16
 Identities = 41/54 (75%), Positives = 45/54 (83%)
 Frame = -3

Query: 280 DTIADAAAIEHFNETIAKAKNEVKELIRAAQENMLEPEAGGTIMESFENRVNHV 119
           DTIADAA +E  NETI+KAKNEVKELI+AAQE  LE E G T+MESFENRVN V
Sbjct: 608 DTIADAATMEKINETISKAKNEVKELIKAAQEKQLEAEPGRTMMESFENRVNQV 661



 Score = 27.3 bits (59), Expect(2) = 8e-16
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -1

Query: 39  VLNKARDDAGSNA 1
           VLNKARDDAGS+A
Sbjct: 661 VLNKARDDAGSSA 673


>gb|AAQ08517.1| RNA polymerase II largest subunit [Nymphaea odorata]
          Length = 1013

 Score = 79.7 bits (195), Expect(2) = 2e-15
 Identities = 40/54 (74%), Positives = 45/54 (83%)
 Frame = -3

Query: 280 DTIADAAAIEHFNETIAKAKNEVKELIRAAQENMLEPEAGGTIMESFENRVNHV 119
           DTIADA+ +E  NETI+KAKNEVKELI+AAQE  LE E G T+MESFENRVN V
Sbjct: 608 DTIADASTMEKINETISKAKNEVKELIKAAQEKQLEAEPGRTMMESFENRVNQV 661



 Score = 27.3 bits (59), Expect(2) = 2e-15
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -1

Query: 39  VLNKARDDAGSNA 1
           VLNKARDDAGS+A
Sbjct: 661 VLNKARDDAGSSA 673