BLASTX nr result

ID: Cimicifuga21_contig00020957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020957
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284533.1| PREDICTED: eukaryotic translation initiation...    86   2e-15
ref|XP_004170682.1| PREDICTED: eukaryotic translation initiation...    84   9e-15
ref|XP_004142652.1| PREDICTED: eukaryotic translation initiation...    84   9e-15
gb|AEI72270.1| eukaryotic translation initiation factor protein ...    84   1e-14
ref|XP_002308015.1| predicted protein [Populus trichocarpa] gi|1...    84   1e-14

>ref|XP_002284533.1| PREDICTED: eukaryotic translation initiation factor 3 subunit E
           [Vitis vinifera]
          Length = 437

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/50 (82%), Positives = 45/50 (90%)
 Frame = +3

Query: 54  MANHDLTRRIAPNLDRHFVFPLLEFLQERQCYSNDEILKAKIDLLNKTNM 203
           MA HDLT RIAPNLDRH VFPLLEFLQERQ Y +++ILKAKI+LLNKTNM
Sbjct: 1   MATHDLTPRIAPNLDRHLVFPLLEFLQERQLYPDEQILKAKIELLNKTNM 50


>ref|XP_004170682.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           E-B-like, partial [Cucumis sativus]
          Length = 121

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/50 (80%), Positives = 46/50 (92%)
 Frame = +3

Query: 54  MANHDLTRRIAPNLDRHFVFPLLEFLQERQCYSNDEILKAKIDLLNKTNM 203
           MA++DLT RIAPNLDRH VFPLLEFLQERQ Y +++ILKAKI+LLNKTNM
Sbjct: 1   MADYDLTPRIAPNLDRHLVFPLLEFLQERQLYPDEQILKAKIELLNKTNM 50


>ref|XP_004142652.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           E-like [Cucumis sativus]
          Length = 437

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/50 (80%), Positives = 46/50 (92%)
 Frame = +3

Query: 54  MANHDLTRRIAPNLDRHFVFPLLEFLQERQCYSNDEILKAKIDLLNKTNM 203
           MA++DLT RIAPNLDRH VFPLLEFLQERQ Y +++ILKAKI+LLNKTNM
Sbjct: 1   MADYDLTPRIAPNLDRHLVFPLLEFLQERQLYPDEQILKAKIELLNKTNM 50


>gb|AEI72270.1| eukaryotic translation initiation factor protein [Citrus
           trifoliata]
          Length = 439

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/50 (78%), Positives = 46/50 (92%)
 Frame = +3

Query: 54  MANHDLTRRIAPNLDRHFVFPLLEFLQERQCYSNDEILKAKIDLLNKTNM 203
           MA +DLT+RIAPNLDRH VFPLLEFLQERQ Y +++ILK+KI+LLNKTNM
Sbjct: 1   MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNM 50


>ref|XP_002308015.1| predicted protein [Populus trichocarpa] gi|118488342|gb|ABK95989.1|
           unknown [Populus trichocarpa]
           gi|222853991|gb|EEE91538.1| predicted protein [Populus
           trichocarpa]
          Length = 437

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/50 (80%), Positives = 45/50 (90%)
 Frame = +3

Query: 54  MANHDLTRRIAPNLDRHFVFPLLEFLQERQCYSNDEILKAKIDLLNKTNM 203
           MA +DLT RIAPNLDRH VFPLLEFLQERQ Y +++ILKAKI+LLNKTNM
Sbjct: 1   MATYDLTPRIAPNLDRHLVFPLLEFLQERQLYPDEQILKAKIELLNKTNM 50


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