BLASTX nr result

ID: Cimicifuga21_contig00020951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020951
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC28982.1| unknown protein [Arabidopsis thaliana]                  76   6e-21
ref|XP_004169074.1| PREDICTED: LOW QUALITY PROTEIN: regulator of...    89   4e-16
ref|XP_004143811.1| PREDICTED: regulator of nonsense transcripts...    89   4e-16
ref|XP_002275646.2| PREDICTED: regulator of nonsense transcripts...    89   5e-16
emb|CBI31526.3| unnamed protein product [Vitis vinifera]               89   5e-16

>gb|AAC28982.1| unknown protein [Arabidopsis thaliana]
          Length = 1029

 Score = 75.9 bits (185), Expect(2) = 6e-21
 Identities = 40/73 (54%), Positives = 49/73 (67%), Gaps = 14/73 (19%)
 Frame = -3

Query: 179 LGITADQKKVFRKAFFTYYDATAELLQSEHTALRQLENEN--------------ANSYEK 42
           L +TADQKK F+KAF TYYDA A+LLQSEH  L Q+E EN              A+SYEK
Sbjct: 74  LDVTADQKKSFKKAFNTYYDALADLLQSEHKLLLQMEKENAKLVNAKGELSEDSASSYEK 133

Query: 41  LQKSYDQLFRGVA 3
           L+KSYD L+R ++
Sbjct: 134 LRKSYDHLYRNIS 146



 Score = 49.7 bits (117), Expect(2) = 6e-21
 Identities = 24/38 (63%), Positives = 28/38 (73%)
 Frame = -1

Query: 316 TSLEHLKGCDAIQMNLSLLTSFTRQGRVLLGLPPPGQE 203
           TS+E LK  D  Q NL+LLTSF RQGR+ LGLP  GQ+
Sbjct: 33  TSVEQLKDRDTTQTNLTLLTSFARQGRIFLGLPISGQD 70


>ref|XP_004169074.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
           2-like, partial [Cucumis sativus]
          Length = 1144

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 48/76 (63%), Positives = 54/76 (71%), Gaps = 14/76 (18%)
 Frame = -3

Query: 188 F*SLGITADQKKVFRKAFFTYYDATAELLQSEHTALRQLENENA--------------NS 51
           F SL ITADQKK FRKAF TYYDA AELLQSEHT+LRQ+E ENA              +S
Sbjct: 183 FKSLNITADQKKFFRKAFHTYYDAAAELLQSEHTSLRQMEQENAKILNAKGELNDENVSS 242

Query: 50  YEKLQKSYDQLFRGVA 3
           YEKL+KSYD L+R V+
Sbjct: 243 YEKLRKSYDHLYRNVS 258



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = -1

Query: 316 TSLEHLKGCDAIQMNLSLLTSFTRQGRVLLGLPPPGQEIYEEFFKALALRQIRRKSLERR 137
           TS+EHL+  D    NL+LL SF RQGR+LLGLPP  Q+ +EEFFK+L +   ++K   + 
Sbjct: 141 TSIEHLRDRDTTLTNLTLLASFARQGRILLGLPPTAQD-HEEFFKSLNITADQKKFFRKA 199

Query: 136 FSHT 125
           F HT
Sbjct: 200 F-HT 202


>ref|XP_004143811.1| PREDICTED: regulator of nonsense transcripts 2-like [Cucumis
           sativus]
          Length = 1195

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 48/76 (63%), Positives = 54/76 (71%), Gaps = 14/76 (18%)
 Frame = -3

Query: 188 F*SLGITADQKKVFRKAFFTYYDATAELLQSEHTALRQLENENA--------------NS 51
           F SL ITADQKK FRKAF TYYDA AELLQSEHT+LRQ+E ENA              +S
Sbjct: 234 FKSLNITADQKKFFRKAFHTYYDAAAELLQSEHTSLRQMEQENAKILNAKGELNDENVSS 293

Query: 50  YEKLQKSYDQLFRGVA 3
           YEKL+KSYD L+R V+
Sbjct: 294 YEKLRKSYDHLYRNVS 309



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = -1

Query: 316 TSLEHLKGCDAIQMNLSLLTSFTRQGRVLLGLPPPGQEIYEEFFKALALRQIRRKSLERR 137
           TS+EHL+  D    NL+LL SF RQGR+LLGLPP  Q+ +EEFFK+L +   ++K   + 
Sbjct: 192 TSIEHLRDRDTTLTNLTLLASFARQGRILLGLPPTAQD-HEEFFKSLNITADQKKFFRKA 250

Query: 136 FSHT 125
           F HT
Sbjct: 251 F-HT 253


>ref|XP_002275646.2| PREDICTED: regulator of nonsense transcripts 2-like [Vitis
           vinifera]
          Length = 1222

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 14/76 (18%)
 Frame = -3

Query: 188 F*SLGITADQKKVFRKAFFTYYDATAELLQSEHTALRQLENENA--------------NS 51
           F  L ITAD KK+FRKAF TYYDA AELLQ+EHT+LRQ+E+ENA              +S
Sbjct: 264 FKGLNITADHKKIFRKAFHTYYDAAAELLQAEHTSLRQMEHENAKILNAKGELSDENVSS 323

Query: 50  YEKLQKSYDQLFRGVA 3
           YEKL+KSYD L+RGV+
Sbjct: 324 YEKLRKSYDHLYRGVS 339



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/64 (56%), Positives = 42/64 (65%)
 Frame = -1

Query: 316 TSLEHLKGCDAIQMNLSLLTSFTRQGRVLLGLPPPGQEIYEEFFKALALRQIRRKSLERR 137
           TS+EHLK  D  Q NLSLL SF RQGR+ LG P  GQEI+EEFFK L +    +K   + 
Sbjct: 221 TSIEHLKDRDTTQTNLSLLASFARQGRIFLGFPLSGQEIHEEFFKGLNITADHKKIFRKA 280

Query: 136 FSHT 125
           F HT
Sbjct: 281 F-HT 283


>emb|CBI31526.3| unnamed protein product [Vitis vinifera]
          Length = 1193

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 14/76 (18%)
 Frame = -3

Query: 188 F*SLGITADQKKVFRKAFFTYYDATAELLQSEHTALRQLENENA--------------NS 51
           F  L ITAD KK+FRKAF TYYDA AELLQ+EHT+LRQ+E+ENA              +S
Sbjct: 235 FKGLNITADHKKIFRKAFHTYYDAAAELLQAEHTSLRQMEHENAKILNAKGELSDENVSS 294

Query: 50  YEKLQKSYDQLFRGVA 3
           YEKL+KSYD L+RGV+
Sbjct: 295 YEKLRKSYDHLYRGVS 310



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/64 (56%), Positives = 42/64 (65%)
 Frame = -1

Query: 316 TSLEHLKGCDAIQMNLSLLTSFTRQGRVLLGLPPPGQEIYEEFFKALALRQIRRKSLERR 137
           TS+EHLK  D  Q NLSLL SF RQGR+ LG P  GQEI+EEFFK L +    +K   + 
Sbjct: 192 TSIEHLKDRDTTQTNLSLLASFARQGRIFLGFPLSGQEIHEEFFKGLNITADHKKIFRKA 251

Query: 136 FSHT 125
           F HT
Sbjct: 252 F-HT 254


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