BLASTX nr result

ID: Cimicifuga21_contig00020936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020936
         (1277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556128.1| PREDICTED: uncharacterized protein P11E10.01...   401   e-109
ref|XP_002275817.1| PREDICTED: uncharacterized protein P11E10.01...   397   e-108
gb|ACU18664.1| unknown [Glycine max]                                  396   e-108
ref|XP_003592185.1| Ornithine cyclodeaminase [Medicago truncatul...   392   e-106
ref|XP_002305268.1| predicted protein [Populus trichocarpa] gi|2...   379   e-103

>ref|XP_003556128.1| PREDICTED: uncharacterized protein P11E10.01-like [Glycine max]
          Length = 340

 Score =  401 bits (1030), Expect = e-109
 Identities = 209/321 (65%), Positives = 248/321 (77%), Gaps = 1/321 (0%)
 Frame = -3

Query: 1158 TQSTPIFIDNQTLRSLLSYPILLQHLQSTLPLVSTTIESPNRQHHXXXXXXXXXXXXXXX 979
            + S+P+FI  +TL ++L++  L+ H QSTLP  ST +++P RQHH               
Sbjct: 17   SSSSPVFISTETLCTILTHHTLMNHFQSTLPKASTILQTPIRQHHSLSPSSSLLLMPSWS 76

Query: 978  XXXXXPYIGVKVVTSFPQNSSRNLPGIHASYLLFDSNTGKTLALMDGTELTLWRTSCVSA 799
                 PYIGVK+VT FPQNSS NLPG+  SY+LF S TG+TLA MD TELTL+RTSCVS 
Sbjct: 77   SSSSLPYIGVKLVTHFPQNSSLNLPGVQGSYVLFSSTTGQTLASMDSTELTLYRTSCVSG 136

Query: 798  LASKFLSRGDSEVLVMIGAGSLASHLIKAHLSVRPNLRKVIIWNRTVEKARNLVKKL-QE 622
            LASK+L+R DSEVLVM+GAGSLA HLIKAHLS  P+LRKVIIWNRTVEKA  L  KL Q 
Sbjct: 137  LASKYLARHDSEVLVMVGAGSLAPHLIKAHLSAIPSLRKVIIWNRTVEKATTLANKLSQS 196

Query: 621  EEWGSVVLEVGECLEEIVGLGDIISCATSSETAMVMGEKLKEGAHLDLVGSFTPSMRECD 442
             E+G V  E   CL+E+VG GDI+SCAT+SET +V GE+LK GAHLDLVGSF  SM ECD
Sbjct: 197  GEFGGVRFEGCGCLDEVVGFGDIVSCATNSETPLVKGERLKGGAHLDLVGSFKNSMMECD 256

Query: 441  DEAIKRGRVFVDCEAALVEAGELVGAFERGVVSPDNIGGRLVDLIKGEKVGRRGSKEITV 262
            DEAI+RG+VFVD E ALVEAGELVGAFERGV+  D IGG LV+L++GEKVGR  S++ITV
Sbjct: 257  DEAIRRGKVFVDNETALVEAGELVGAFERGVIKKDEIGGSLVELVRGEKVGRISSEQITV 316

Query: 261  FKSVGSAVVDIVSAQLVYETY 199
            FKSVGSAVVD+++AQLVYETY
Sbjct: 317  FKSVGSAVVDMLAAQLVYETY 337


>ref|XP_002275817.1| PREDICTED: uncharacterized protein P11E10.01 [Vitis vinifera]
          Length = 340

 Score =  397 bits (1021), Expect = e-108
 Identities = 203/319 (63%), Positives = 251/319 (78%), Gaps = 1/319 (0%)
 Frame = -3

Query: 1149 TPIFIDNQTLRSLLSYPILLQHLQSTLPLVSTTIESPNRQHHXXXXXXXXXXXXXXXXXX 970
            TP+FI+  TLRS+L++  L+ H +++LP V++++ SP RQ++                  
Sbjct: 16   TPVFINTATLRSILTHKSLIHHFRASLPTVTSSLHSPPRQNYALSPSSSLLLMPSWSSSS 75

Query: 969  XXPYIGVKVVTSFPQNSSRNLPGIHASYLLFDSNTGKTLALMDGTELTLWRTSCVSALAS 790
              PY+GVK+VT FPQNS+  LPG+H SY+LFDS TG+TLA MDGTELTLWRTSCVS LAS
Sbjct: 76   SFPYLGVKLVTYFPQNSTLELPGVHGSYVLFDSRTGQTLASMDGTELTLWRTSCVSGLAS 135

Query: 789  KFLSRGDSEVLVMIGAGSLASHLIKAHLSVRPNLRKVIIWNRTVEKARNLVKKLQEE-EW 613
            + L+R D  VLVMIG+G+LA HLIKAHL+ +P+LR+VIIWNRTVEKAR L ++L+ E ++
Sbjct: 136  EILARNDVGVLVMIGSGALAPHLIKAHLTAKPSLRRVIIWNRTVEKARKLAQELENEGKF 195

Query: 612  GSVVLEVGECLEEIVGLGDIISCATSSETAMVMGEKLKEGAHLDLVGSFTPSMRECDDEA 433
              V  E  ECLEE+VG+GDI+SCAT+SE+ +V G +LK GAHLDLVGSF  SMRECDDEA
Sbjct: 196  EGVCFESTECLEEVVGMGDIVSCATNSESPLVNGARLKAGAHLDLVGSFRHSMRECDDEA 255

Query: 432  IKRGRVFVDCEAALVEAGELVGAFERGVVSPDNIGGRLVDLIKGEKVGRRGSKEITVFKS 253
            IKRGRVF+D E AL EAGELVGAFERGV+    IGG LV+LI GEKVGRR S+E+TVFKS
Sbjct: 256  IKRGRVFIDNEMALEEAGELVGAFERGVIGKGEIGGNLVELIIGEKVGRRDSEEVTVFKS 315

Query: 252  VGSAVVDIVSAQLVYETYL 196
            VGSAVVDI+SAQLVYETY+
Sbjct: 316  VGSAVVDILSAQLVYETYI 334


>gb|ACU18664.1| unknown [Glycine max]
          Length = 340

 Score =  396 bits (1017), Expect = e-108
 Identities = 207/321 (64%), Positives = 246/321 (76%), Gaps = 1/321 (0%)
 Frame = -3

Query: 1158 TQSTPIFIDNQTLRSLLSYPILLQHLQSTLPLVSTTIESPNRQHHXXXXXXXXXXXXXXX 979
            + S+P+FI  +TL ++L++  L+ H QSTLP  ST +++P RQHH               
Sbjct: 17   SSSSPVFISTETLCTILTHYTLMNHFQSTLPKASTILQTPIRQHHSLSPSSSLLLMPSWS 76

Query: 978  XXXXXPYIGVKVVTSFPQNSSRNLPGIHASYLLFDSNTGKTLALMDGTELTLWRTSCVSA 799
                 PYIGVK+VT FPQNSS NLPG+  SY+LF S TG+TLA MD TELTL+RTSCVS 
Sbjct: 77   SSSSLPYIGVKLVTHFPQNSSLNLPGVQGSYVLFSSTTGQTLASMDSTELTLYRTSCVSG 136

Query: 798  LASKFLSRGDSEVLVMIGAGSLASHLIKAHLSVRPNLRKVIIWNRTVEKARNLVKKL-QE 622
            LASK+L+R DSEVLVM+GAGSLA HLIKAHLS  P+LRKVIIWNRTVEKA  L  KL Q 
Sbjct: 137  LASKYLARHDSEVLVMVGAGSLAPHLIKAHLSAIPSLRKVIIWNRTVEKATTLANKLSQS 196

Query: 621  EEWGSVVLEVGECLEEIVGLGDIISCATSSETAMVMGEKLKEGAHLDLVGSFTPSMRECD 442
             E+G V  E   CL+E+VG GDI+SCAT+SET +V GE+LK GAHLDLVGSF  SM ECD
Sbjct: 197  GEFGGVRFEGCGCLDEVVGFGDIVSCATNSETPLVKGERLKGGAHLDLVGSFKNSMMECD 256

Query: 441  DEAIKRGRVFVDCEAALVEAGELVGAFERGVVSPDNIGGRLVDLIKGEKVGRRGSKEITV 262
            DEAI+RG+VFVD E ALVEAGELVGAFERGV+  D IGG LV+L++GEKVGR   ++ITV
Sbjct: 257  DEAIRRGKVFVDNETALVEAGELVGAFERGVIKKDEIGGSLVELVRGEKVGRISFEQITV 316

Query: 261  FKSVGSAVVDIVSAQLVYETY 199
            FKSVG AVVD+++AQLVYETY
Sbjct: 317  FKSVGFAVVDMLAAQLVYETY 337


>ref|XP_003592185.1| Ornithine cyclodeaminase [Medicago truncatula]
            gi|217073320|gb|ACJ85019.1| unknown [Medicago truncatula]
            gi|355481233|gb|AES62436.1| Ornithine cyclodeaminase
            [Medicago truncatula] gi|388513721|gb|AFK44922.1| unknown
            [Medicago truncatula]
          Length = 336

 Score =  392 bits (1006), Expect = e-106
 Identities = 201/321 (62%), Positives = 250/321 (77%), Gaps = 3/321 (0%)
 Frame = -3

Query: 1152 STPIFIDNQTLRSLLSYPILLQHLQSTLPLVSTTIESPNRQHHXXXXXXXXXXXXXXXXX 973
            S+PIFI  + LR++L++  L+ H+QS LP  ST +++P RQH+                 
Sbjct: 13   SSPIFISTENLRTILTHQTLINHIQSNLPKASTFLQTPIRQHYNLSPSSSLLLMPSWSST 72

Query: 972  XXXPYIGVKVVTSFPQNSSRNLPGIHASYLLFDSNTGKTLALMDGTELTLWRTSCVSALA 793
               PYIGVK+VT FP+NSS+NLPG+  SY+LF+S TG+TLA MD TELTL+RTSCVS LA
Sbjct: 73   PSFPYIGVKLVTHFPENSSQNLPGVQGSYVLFNSTTGQTLASMDSTELTLYRTSCVSGLA 132

Query: 792  SKFLSRGDSEVLVMIGAGSLASHLIKAHLSVRPNLRKVIIWNRTVEKARNLVKKLQE-EE 616
            SK+L+R DSE+LVM+GAG+LA HLIKAH S RP+L++V IWNRTVEKA+ L KKL E +E
Sbjct: 133  SKYLARDDSEILVMVGAGALAPHLIKAHFSARPSLKRVFIWNRTVEKAKTLAKKLSESDE 192

Query: 615  WGSVVLEVGEC--LEEIVGLGDIISCATSSETAMVMGEKLKEGAHLDLVGSFTPSMRECD 442
            +    L    C  L+E+VG GDI+SCAT+SE A+V GE+LK GAHLDLVGSF  SM+ECD
Sbjct: 193  FPLSGLSFEGCGNLDEVVGFGDIVSCATNSEAALVKGERLKVGAHLDLVGSFKHSMKECD 252

Query: 441  DEAIKRGRVFVDCEAALVEAGELVGAFERGVVSPDNIGGRLVDLIKGEKVGRRGSKEITV 262
            DEA+KRG+VFVD EAALVEAGELVGAFERGV+  D IGG L++LI+G+KVGR  S+EITV
Sbjct: 253  DEALKRGKVFVDNEAALVEAGELVGAFERGVIKEDEIGGNLLELIRGDKVGRSSSEEITV 312

Query: 261  FKSVGSAVVDIVSAQLVYETY 199
            FKSVGSAVVD+++AQ VYETY
Sbjct: 313  FKSVGSAVVDMLAAQFVYETY 333


>ref|XP_002305268.1| predicted protein [Populus trichocarpa] gi|222848232|gb|EEE85779.1|
            predicted protein [Populus trichocarpa]
          Length = 316

 Score =  379 bits (973), Expect = e-103
 Identities = 198/317 (62%), Positives = 251/317 (79%), Gaps = 2/317 (0%)
 Frame = -3

Query: 1146 PIFIDNQTLRSLLSYPILLQHLQSTLPLVSTTIESPNRQHHXXXXXXXXXXXXXXXXXXX 967
            P+F+ N++L S+L++  L+QH  ++LP  S+T+ +P RQ +                   
Sbjct: 1    PLFLTNESLHSILAHNSLIQHFHTSLPTTSSTLHTPIRQSYDLSQSSSLLLMPSWSSTPS 60

Query: 966  XPYIGVKVVTSFPQNSSRNLPGIHASYLLFDSNTGKTLALMDGTELTLWRTSCVSALASK 787
             PYIGVK+VT FPQNS+ NLPGIHASY+LF S TG+TLA MDGT LTL+RTSCVS LASK
Sbjct: 61   LPYIGVKLVTYFPQNSALNLPGIHASYVLFSSTTGQTLASMDGTVLTLYRTSCVSGLASK 120

Query: 786  FLSRGDSEVLVMIGAGSLASHLIKAHLSVRPNLRKVIIWNRTVEKARNLVKKLQEEEWGS 607
             L+R DS+VLVM+GAG+LA HLIKAHL+ RP+L+KVIIWNRTV+KA +L +KL++E  G+
Sbjct: 121  ILARNDSKVLVMVGAGALAPHLIKAHLAARPSLQKVIIWNRTVKKASDLAEKLKKECIGN 180

Query: 606  --VVLEVGECLEEIVGLGDIISCATSSETAMVMGEKLKEGAHLDLVGSFTPSMRECDDEA 433
              V  E    LEEI+GLGDI+SCAT+++  +V GEKLK+GAHLD+VGSF  +MRECDDEA
Sbjct: 181  DGVCFESNGNLEEIIGLGDIVSCATNADAPLVKGEKLKQGAHLDMVGSFKETMRECDDEA 240

Query: 432  IKRGRVFVDCEAALVEAGELVGAFERGVVSPDNIGGRLVDLIKGEKVGRRGSKEITVFKS 253
            I+RGRVFVD EAALVEAGELVGAFERGV   +++ G LV+LIKGE+VGR+ S+EITVFKS
Sbjct: 241  IRRGRVFVDNEAALVEAGELVGAFERGVTKKEDV-GFLVELIKGEQVGRKNSEEITVFKS 299

Query: 252  VGSAVVDIVSAQLVYET 202
            VGSAVVD+++AQLVYE+
Sbjct: 300  VGSAVVDLLAAQLVYES 316


Top