BLASTX nr result

ID: Cimicifuga21_contig00020927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00020927
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143171.1| PREDICTED: zinc finger HIT domain-containing...   234   1e-59
ref|XP_002283156.1| PREDICTED: uncharacterized protein LOC100245...   230   3e-58
ref|XP_003551208.1| PREDICTED: zinc finger HIT domain-containing...   220   2e-55
gb|ADE77932.1| unknown [Picea sitchensis]                             220   3e-55
ref|XP_002319400.1| predicted protein [Populus trichocarpa] gi|2...   219   4e-55

>ref|XP_004143171.1| PREDICTED: zinc finger HIT domain-containing protein 1 homolog
           [Cucumis sativus] gi|449505173|ref|XP_004162397.1|
           PREDICTED: LOW QUALITY PROTEIN: zinc finger HIT
           domain-containing protein 1 homolog [Cucumis sativus]
          Length = 171

 Score =  234 bits (597), Expect = 1e-59
 Identities = 119/156 (76%), Positives = 128/156 (82%)
 Frame = +2

Query: 224 KVASKMVAALASTDNRTQAALARLEALENDNAATEAIEMIXXXXXXXXXXXXQVYAKRQS 403
           KVA KMVAALAS+DNRTQAALARLEALENDNA  E +E I            Q Y KRQS
Sbjct: 18  KVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDASLDDDD-QAYIKRQS 76

Query: 404 KNTKRKTRQGKALENAKKAPRTFMELLQEASLEDVPPHIPSYLRAAVGPPSSTSRRHFCA 583
           K TKRKTRQ KALE AKKAP+TFMELL EA+LE +PPH+PSYL+AAVGPPSSTSRRHFC 
Sbjct: 77  KGTKRKTRQAKALE-AKKAPKTFMELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCT 135

Query: 584 VCGFTASYTCVRCGMRFCSCRCQVIHNDTRCLKFVA 691
           VCGF ASYTC+RCG+RFCS RCQ IHNDTRCLKFVA
Sbjct: 136 VCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA 171


>ref|XP_002283156.1| PREDICTED: uncharacterized protein LOC100245318 [Vitis vinifera]
           gi|297739700|emb|CBI29882.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score =  230 bits (586), Expect = 3e-58
 Identities = 114/156 (73%), Positives = 124/156 (79%)
 Frame = +2

Query: 224 KVASKMVAALASTDNRTQAALARLEALENDNAATEAIEMIXXXXXXXXXXXXQVYAKRQS 403
           KVAS+M AALASTDNR QAALARLEALENDNA  E I++                 KRQS
Sbjct: 17  KVASRMAAALASTDNRNQAALARLEALENDNAGMETIDVNDDEDASLDDDDEGYAQKRQS 76

Query: 404 KNTKRKTRQGKALENAKKAPRTFMELLQEASLEDVPPHIPSYLRAAVGPPSSTSRRHFCA 583
           K TKR TRQ KALENA+KAPRTF+EL+ EA+LE +PPH+PSYLRAAVGPPSSTSRRHFC 
Sbjct: 77  KGTKRTTRQAKALENARKAPRTFLELVHEANLESLPPHVPSYLRAAVGPPSSTSRRHFCT 136

Query: 584 VCGFTASYTCVRCGMRFCSCRCQVIHNDTRCLKFVA 691
           VCGF A+YTCVRCG RFCS RCQ IHNDTRCLKFVA
Sbjct: 137 VCGFAANYTCVRCGTRFCSTRCQNIHNDTRCLKFVA 172


>ref|XP_003551208.1| PREDICTED: zinc finger HIT domain-containing protein 1 homolog
           [Glycine max]
          Length = 173

 Score =  220 bits (561), Expect = 2e-55
 Identities = 112/157 (71%), Positives = 125/157 (79%), Gaps = 1/157 (0%)
 Frame = +2

Query: 224 KVASKMVAALASTDNRTQAALARLEALENDNAATEAIEMIXXXXXXXXXXXXQVYA-KRQ 400
           KVASKM AALAS DNRTQAALARL+ALENDNA  E  +              Q Y  K+Q
Sbjct: 18  KVASKMAAALASADNRTQAALARLDALENDNAGFEIADANNDDDDASLDEEDQFYMQKKQ 77

Query: 401 SKNTKRKTRQGKALENAKKAPRTFMELLQEASLEDVPPHIPSYLRAAVGPPSSTSRRHFC 580
           SK TKRKTRQ KALE A++APRTF+ELL EA+LE +PPH+PSY +AAVGPPSSTSRRHFC
Sbjct: 78  SKGTKRKTRQAKALE-ARRAPRTFLELLHEANLESLPPHVPSYWKAAVGPPSSTSRRHFC 136

Query: 581 AVCGFTASYTCVRCGMRFCSCRCQVIHNDTRCLKFVA 691
            VCGF+A+YTCVRCGMRFCS RCQ +HNDTRCLKFVA
Sbjct: 137 TVCGFSANYTCVRCGMRFCSHRCQNVHNDTRCLKFVA 173


>gb|ADE77932.1| unknown [Picea sitchensis]
          Length = 174

 Score =  220 bits (560), Expect = 3e-55
 Identities = 108/156 (69%), Positives = 124/156 (79%)
 Frame = +2

Query: 224 KVASKMVAALASTDNRTQAALARLEALENDNAATEAIEMIXXXXXXXXXXXXQVYAKRQS 403
           KVA KM AALAS DNRTQAALARL+ALENDNAA E + +                 K+QS
Sbjct: 19  KVAPKMNAALASADNRTQAALARLDALENDNAAVEVVVVDDDEDASLDEDEQAFGQKKQS 78

Query: 404 KNTKRKTRQGKALENAKKAPRTFMELLQEASLEDVPPHIPSYLRAAVGPPSSTSRRHFCA 583
           + +KR+TRQ KALE AKKAPR FMELLQEA+LE +P H+P+YLRAAVGPPSST+RRHFC+
Sbjct: 79  RGSKRRTRQAKALEIAKKAPRNFMELLQEANLEALPAHVPTYLRAAVGPPSSTARRHFCS 138

Query: 584 VCGFTASYTCVRCGMRFCSCRCQVIHNDTRCLKFVA 691
           VCG+ ASYTCV+CG RFCSCRCQVIH DTRC+KFVA
Sbjct: 139 VCGYIASYTCVQCGARFCSCRCQVIHTDTRCMKFVA 174


>ref|XP_002319400.1| predicted protein [Populus trichocarpa] gi|222857776|gb|EEE95323.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  219 bits (559), Expect = 4e-55
 Identities = 106/156 (67%), Positives = 122/156 (78%)
 Frame = +2

Query: 224 KVASKMVAALASTDNRTQAALARLEALENDNAATEAIEMIXXXXXXXXXXXXQVYAKRQS 403
           K+A KM AALAS DNRTQAA+ARLEALEND    E +E +             VY +++ 
Sbjct: 18  KIAPKMAAALASNDNRTQAAIARLEALENDYTGMETVEAVDDDEASLDDDD-DVYIQKKQ 76

Query: 404 KNTKRKTRQGKALENAKKAPRTFMELLQEASLEDVPPHIPSYLRAAVGPPSSTSRRHFCA 583
           K TKRKTRQ KALENA+KAPR F+ELL EA+LE +PPH+PSYLRAAVGPPSST RRHFC 
Sbjct: 77  KGTKRKTRQAKALENARKAPRNFLELLHEANLEALPPHVPSYLRAAVGPPSSTCRRHFCT 136

Query: 584 VCGFTASYTCVRCGMRFCSCRCQVIHNDTRCLKFVA 691
           VCGFT++YTC +CGMRFCS RCQ IH+DTRCLKFVA
Sbjct: 137 VCGFTSNYTCAKCGMRFCSIRCQKIHDDTRCLKFVA 172


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